FFCP PHASE1:Hg19::chr19:15236470..15236542,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:15236470..15236542,-
|short_description=p1@ILVBL
|description=CAGE_peak_1_at_ILVBL_5end
|association_with_transcript=0bp_to_ENST00000269733,ENST0000053374...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10994 | |EntrezGene=10994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6041 | |HGNC=6041 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNI8,E9PL44 | |UniProt=C9JNI8,E9PL44 | ||
|association_with_transcript=0bp_to_ENST00000269733,ENST00000533747,ENST00000534378_5end | |||
|cluster_id=chr19:15236470..15236542,- | |||
|coexpression_cluster_id=C1811 | |||
|description=CAGE_peak_1_at_ILVBL_5end | |||
|id=chr19:15236470..15236542,- | |||
|ontology_enrichment_celltype=CL:0000055!4.22e-15!180;CL:0000183!7.89e-11!59;CL:0002321!1.88e-09!248;CL:0000220!4.11e-09!246;CL:0000680!5.94e-09!57;CL:0000056!5.94e-09!57;CL:0000355!5.94e-09!57;CL:0000187!7.50e-09!54;CL:0000222!1.60e-08!119;CL:0000393!4.55e-08!60;CL:0000211!4.55e-08!60;CL:0000325!7.62e-08!39;CL:0000192!1.59e-07!42;CL:0000514!1.59e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.27e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.62e-10,250;CL:0000680,3.68e-09,58;CL:0000056,3.68e-09,58;CL:0000355,3.68e-09,58;CL:0000187,4.64e-09,55;CL:0000222,5.87e-09,121;CL:0000349,2.10e-08,19;CL:0000393,2.87e-08,61;CL:0000211,2.87e-08,61;CL:0000192,9.86e-08,43;CL:0000514,9.86e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.35e-12!118;UBERON:0000119!8.19e-12!312;UBERON:0000483!1.40e-11!309;UBERON:0000468!5.31e-11!659;UBERON:0000481!6.97e-10!347;UBERON:0004290!1.18e-09!70;UBERON:0004872!1.26e-09!84;UBERON:0000475!1.78e-09!365;UBERON:0005256!1.83e-09!143;UBERON:0000486!3.61e-09!82;UBERON:0003103!1.12e-08!69;UBERON:0001134!1.85e-08!61;UBERON:0002036!1.85e-08!61;UBERON:0003082!1.85e-08!61;UBERON:0002100!2.13e-08!216;UBERON:0000914!2.50e-08!83;UBERON:0002329!2.50e-08!83;UBERON:0003077!2.50e-08!83;UBERON:0003059!2.50e-08!83;UBERON:0007282!2.50e-08!83;UBERON:0009618!2.50e-08!83;UBERON:0007285!2.50e-08!83;UBERON:0002385!3.00e-08!63;UBERON:0001015!3.00e-08!63;UBERON:0000383!3.00e-08!63;UBERON:0002049!8.17e-08!79;UBERON:0007798!8.17e-08!79;UBERON:0000025!1.38e-07!194;UBERON:0000490!2.35e-07!138;UBERON:0007100!2.52e-07!27;UBERON:0000478!3.94e-07!24;UBERON:0001009!6.87e-07!113;UBERON:0005631!9.08e-07!14;UBERON:0000158!9.08e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.92e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.53e-13,309;UBERON:0000483,2.72e-13,306;UBERON:0007503,1.66e-12,78;UBERON:0003104,5.13e-12,160;UBERON:0009142,5.13e-12,160;UBERON:0003914,6.97e-12,117;UBERON:0004872,5.07e-10,83;UBERON:0007524,6.01e-10,73;UBERON:0002329,7.33e-10,71;UBERON:0003059,7.33e-10,71;UBERON:0007282,7.33e-10,71;UBERON:0004290,7.33e-10,71;UBERON:0009618,7.33e-10,71;UBERON:0003077,1.36e-09,72;UBERON:0007285,1.36e-09,72;UBERON:0000486,2.29e-09,83;UBERON:0005256,4.62e-09,122;UBERON:0002100,5.58e-09,199;UBERON:0001134,1.16e-08,62;UBERON:0002036,1.16e-08,62;UBERON:0003082,1.16e-08,62;UBERON:0000490,1.32e-08,148;UBERON:0003103,1.78e-08,68;UBERON:0002385,1.89e-08,64;UBERON:0001015,1.89e-08,64;UBERON:0000383,1.89e-08,64;UBERON:0002049,3.63e-08,78;UBERON:0007798,3.63e-08,78;UBERON:0000025,1.35e-07,192;UBERON:0007100,2.52e-07,27;UBERON:0001009,3.72e-07,112;UBERON:0000478,3.94e-07,24;UBERON:0005631,9.07e-07,14;UBERON:0000158,9.07e-07,14 | |||
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| ||
|short_description=p1@ILVBL | |||
}} | }} |
Latest revision as of 06:50, 16 September 2015
Short description: | p1@ILVBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ILVBL_5end |
Coexpression cluster: | C1811_Mesenchymal_Alveolar_Pericytes_Placental_Renal_Melanocyte_Fibroblast |
Association with transcript: | 0bp_to_ENST00000269733, ENST00000533747, ENST00000534378_5end |
EntrezGene: | ILVBL |
HGNC: | 6041 |
UniProt: | C9JNI8E9PL44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.62e-10 | 250 |
muscle precursor cell | 3.68e-09 | 58 |
myoblast | 3.68e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.68e-09 | 58 |
muscle cell | 4.64e-09 | 55 |
mesodermal cell | 5.87e-09 | 121 |
extraembryonic cell | 2.10e-08 | 19 |
electrically responsive cell | 2.87e-08 | 61 |
electrically active cell | 2.87e-08 | 61 |
smooth muscle cell | 9.86e-08 | 43 |
smooth muscle myoblast | 9.86e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.53e-13 | 309 |
epithelium | 2.72e-13 | 306 |
epithelial vesicle | 1.66e-12 | 78 |
mesenchyme | 5.13e-12 | 160 |
entire embryonic mesenchyme | 5.13e-12 | 160 |
epithelial tube | 6.97e-12 | 117 |
splanchnic layer of lateral plate mesoderm | 5.07e-10 | 83 |
dense mesenchyme tissue | 6.01e-10 | 73 |
somite | 7.33e-10 | 71 |
presomitic mesoderm | 7.33e-10 | 71 |
presumptive segmental plate | 7.33e-10 | 71 |
dermomyotome | 7.33e-10 | 71 |
trunk paraxial mesoderm | 7.33e-10 | 71 |
paraxial mesoderm | 1.36e-09 | 72 |
presumptive paraxial mesoderm | 1.36e-09 | 72 |
multilaminar epithelium | 2.29e-09 | 83 |
trunk mesenchyme | 4.62e-09 | 122 |
trunk | 5.58e-09 | 199 |
skeletal muscle tissue | 1.16e-08 | 62 |
striated muscle tissue | 1.16e-08 | 62 |
myotome | 1.16e-08 | 62 |
unilaminar epithelium | 1.32e-08 | 148 |
compound organ | 1.78e-08 | 68 |
muscle tissue | 1.89e-08 | 64 |
musculature | 1.89e-08 | 64 |
musculature of body | 1.89e-08 | 64 |
vasculature | 3.63e-08 | 78 |
vascular system | 3.63e-08 | 78 |
tube | 1.35e-07 | 192 |
primary circulatory organ | 2.52e-07 | 27 |
circulatory system | 3.72e-07 | 112 |
extraembryonic structure | 3.94e-07 | 24 |
extraembryonic membrane | 9.07e-07 | 14 |
membranous layer | 9.07e-07 | 14 |