FFCP PHASE1:Hg19::chr22:24823517..24823546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135 | |EntrezGene=135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=263 | |HGNC=263 | ||
|TSSclassifier=strong | |||
|UniProt=P29274,B3KVQ4 | |UniProt=P29274,B3KVQ4 | ||
|association_with_transcript=0bp_to_ENST00000337539,ENST00000496258,ENST00000541988,NM_000675,uc002zzy.3,uc011ajs.1_5end | |association_with_transcript=0bp_to_ENST00000337539,ENST00000496258,ENST00000541988,NM_000675,uc002zzy.3,uc011ajs.1_5end | ||
|cluster_id=chr22:24823517..24823546,+ | |||
|coexpression_cluster_id=C3184 | |coexpression_cluster_id=C3184 | ||
|description=CAGE_peak_5_at_ADORA2A_5end | |description=CAGE_peak_5_at_ADORA2A_5end | ||
|id=chr22:24823517..24823546,+ | |id=chr22:24823517..24823546,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.33e-53!53;CL:0000051!1.33e-53!53;CL:0000738!3.89e-53!140;CL:0000838!1.22e-52!52;CL:0002087!2.23e-43!119;CL:0000037!1.24e-41!172;CL:0000566!1.24e-41!172;CL:0002032!3.19e-39!165;CL:0000837!3.19e-39!165;CL:0000988!8.39e-38!182;CL:0002031!1.26e-37!124;CL:0000084!9.12e-29!25;CL:0000827!9.12e-29!25;CL:0000791!6.09e-24!18;CL:0000789!6.09e-24!18;CL:0002420!6.09e-24!18;CL:0002419!6.09e-24!18;CL:0000790!6.09e-24!18;CL:0000945!1.59e-21!24;CL:0000826!1.59e-21!24;CL:0000625!4.72e-16!11;CL:0000236!2.83e-12!14;CL:0000094!2.46e-10!8;CL:0000624!2.37e-08!6;CL:0000766!1.78e-07!76;CL:0000134!1.80e-07!358;CL:0000081!5.04e-07!11;CL:0002320!6.15e-07!365;CL:0002393!6.41e-07!9;CL:0002397!6.41e-07!9 | |ontology_enrichment_celltype=CL:0000542!1.33e-53!53;CL:0000051!1.33e-53!53;CL:0000738!3.89e-53!140;CL:0000838!1.22e-52!52;CL:0002087!2.23e-43!119;CL:0000037!1.24e-41!172;CL:0000566!1.24e-41!172;CL:0002032!3.19e-39!165;CL:0000837!3.19e-39!165;CL:0000988!8.39e-38!182;CL:0002031!1.26e-37!124;CL:0000084!9.12e-29!25;CL:0000827!9.12e-29!25;CL:0000791!6.09e-24!18;CL:0000789!6.09e-24!18;CL:0002420!6.09e-24!18;CL:0002419!6.09e-24!18;CL:0000790!6.09e-24!18;CL:0000945!1.59e-21!24;CL:0000826!1.59e-21!24;CL:0000625!4.72e-16!11;CL:0000236!2.83e-12!14;CL:0000094!2.46e-10!8;CL:0000624!2.37e-08!6;CL:0000766!1.78e-07!76;CL:0000134!1.80e-07!358;CL:0000081!5.04e-07!11;CL:0002320!6.15e-07!365;CL:0002393!6.41e-07!9;CL:0002397!6.41e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000542;5.34e-37;53!CL:0000084;1.49e-35;25!CL:0000791;9.73e-34;18!CL:0000789;9.73e-34;18!CL:0002419;9.73e-34;18!CL:0000945;7.12e-28;24!CL:0000625;1.57e-24;11!CL:0000236;2.78e-14;13!CL:0002087;3.28e-10;104!CL:0000624;2.64e-09;6!CL:0000738;3.66e-08;136!CL:0000898;1.12e-07;3!CL:0000775;1.72e-07;3!CL:0000094;3.97e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.17e-68,52;CL:0000542,2.74e-66,53;CL:0000051,2.74e-66,53;CL:0000738,4.40e-37,136;CL:0000084,1.89e-35,25;CL:0000827,1.89e-35,25;CL:0000791,1.84e-33,18;CL:0000789,1.84e-33,18;CL:0002420,1.84e-33,18;CL:0002419,1.84e-33,18;CL:0000790,1.84e-33,18;CL:0002087,6.05e-32,115;CL:0000037,2.23e-28,168;CL:0000945,6.82e-28,24;CL:0000826,6.82e-28,24;CL:0000988,3.74e-26,177;CL:0002031,8.43e-26,120;CL:0002032,3.45e-25,161;CL:0000837,3.45e-25,161;CL:0000625,2.57e-24,11;CL:0000236,3.74e-16,14;CL:0000624,2.98e-09,6;CL:0000898,1.08e-07,3;CL:0000775,1.33e-07,3;CL:0000094,3.19e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;5.34e-37;53!CL:0000790;9.73e-34;18 | |||
|ontology_enrichment_disease=DOID:0060058!2.76e-09!10 | |ontology_enrichment_disease=DOID:0060058!2.76e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.59e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.02e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.61e-11!102;UBERON:0003061!9.61e-11!102;UBERON:0002193!2.81e-10!112;UBERON:0000178!6.54e-10!15;UBERON:0000179!6.54e-10!15;UBERON:0000463!6.54e-10!15;UBERON:0004177!2.51e-09!7 | |ontology_enrichment_uberon=UBERON:0002390!9.61e-11!102;UBERON:0003061!9.61e-11!102;UBERON:0002193!2.81e-10!112;UBERON:0000178!6.54e-10!15;UBERON:0000179!6.54e-10!15;UBERON:0000463!6.54e-10!15;UBERON:0004177!2.51e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.35e-15;15!UBERON:0000179;1.35e-15;15!UBERON:0000463;1.35e-15;15!UBERON:0002390;3.27e-12;32!UBERON:0004177;8.55e-10;5!UBERON:0005057;8.55e-10;5!UBERON:0002193;9.01e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.55e-15,15;UBERON:0000179,1.55e-15,15;UBERON:0000463,1.55e-15,15;UBERON:0004177,9.51e-14,7;UBERON:0005057,9.51e-14,7;UBERON:0002370,8.13e-09,4;UBERON:0005058,8.13e-09,4;UBERON:0009113,8.13e-09,4;UBERON:0003295,8.13e-09,4;UBERON:0005562,8.13e-09,4 | |||
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|short_description=p5@ADORA2A | |short_description=p5@ADORA2A | ||
}} | }} |
Latest revision as of 10:36, 19 September 2015
Short description: | p5@ADORA2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADORA2A_5end |
Coexpression cluster: | C3184_Eosinophils_CD8_CD4_Neutrophils_hairy_Whole_B |
Association with transcript: | 0bp_to_ENST00000337539, ENST00000496258, ENST00000541988, NM_000675, uc002zzy.3, uc011ajs.1_5end |
EntrezGene: | ADORA2A |
HGNC: | 263 |
UniProt: | P29274B3KVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.17e-68 | 52 |
lymphocyte | 2.74e-66 | 53 |
common lymphoid progenitor | 2.74e-66 | 53 |
leukocyte | 4.40e-37 | 136 |
T cell | 1.89e-35 | 25 |
pro-T cell | 1.89e-35 | 25 |
mature alpha-beta T cell | 1.84e-33 | 18 |
alpha-beta T cell | 1.84e-33 | 18 |
immature T cell | 1.84e-33 | 18 |
mature T cell | 1.84e-33 | 18 |
immature alpha-beta T cell | 1.84e-33 | 18 |
nongranular leukocyte | 6.05e-32 | 115 |
hematopoietic stem cell | 2.23e-28 | 168 |
lymphocyte of B lineage | 6.82e-28 | 24 |
pro-B cell | 6.82e-28 | 24 |
hematopoietic cell | 3.74e-26 | 177 |
hematopoietic lineage restricted progenitor cell | 8.43e-26 | 120 |
hematopoietic oligopotent progenitor cell | 3.45e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-25 | 161 |
CD8-positive, alpha-beta T cell | 2.57e-24 | 11 |
B cell | 3.74e-16 | 14 |
CD4-positive, alpha-beta T cell | 2.98e-09 | 6 |
naive T cell | 1.08e-07 | 3 |
neutrophil | 1.33e-07 | 3 |
granulocyte | 3.19e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.55e-15 | 15 |
haemolymphatic fluid | 1.55e-15 | 15 |
organism substance | 1.55e-15 | 15 |
hemopoietic organ | 9.51e-14 | 7 |
immune organ | 9.51e-14 | 7 |
thymus | 8.13e-09 | 4 |
hemolymphoid system gland | 8.13e-09 | 4 |
thymic region | 8.13e-09 | 4 |
pharyngeal gland | 8.13e-09 | 4 |
thymus primordium | 8.13e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.02e-07 | 10 |