FFCP PHASE1:Hg19::chr22:20255765..20255800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65078 | |EntrezGene=65078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18601 | |HGNC=18601 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZR6 | |UniProt=Q9BZR6 | ||
|association_with_transcript=15bp_to_NM_023004,uc002zrv.2_5end | |association_with_transcript=15bp_to_NM_023004,uc002zrv.2_5end | ||
|cluster_id=chr22:20255765..20255800,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_RTN4R_5end | |description=CAGE_peak_2_at_RTN4R_5end | ||
|id=chr22:20255765..20255800,- | |id=chr22:20255765..20255800,- | ||
|ontology_enrichment_celltype=CL:0000066!2.16e-12!254 | |ontology_enrichment_celltype=CL:0000066!2.16e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.69e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.86e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.95e-12;3!UBERON:0006601;8.38e-09;82 | |||
|ontology_enrichment_disease=DOID:305!5.39e-08!106;DOID:0050687!3.62e-07!143 | |ontology_enrichment_disease=DOID:305!5.39e-08!106;DOID:0050687!3.62e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;6.35e-55;22!UBERON:0001950;1.99e-54;20!UBERON:0000956;5.15e-48;25!UBERON:0000203;5.15e-48;25!UBERON:0001869;7.31e-40;32!UBERON:0001893;3.04e-37;34!UBERON:0003528;1.27e-36;34!UBERON:0002020;1.27e-36;34!UBERON:0002791;1.97e-35;32!UBERON:0002780;1.72e-28;41!UBERON:0001890;1.72e-28;41!UBERON:0000073;7.29e-26;53!UBERON:0002616;7.29e-26;53!UBERON:0000955;3.52e-19;68!UBERON:0002021;5.48e-19;5!UBERON:0001872;9.58e-19;5!UBERON:0001017;6.71e-18;75!UBERON:0001016;4.29e-17;83!UBERON:0000200;7.30e-16;6!UBERON:0001871;1.49e-13;6!UBERON:0000349;2.87e-12;5!UBERON:0002680;2.48e-10;9!UBERON:0001895;2.48e-10;9!UBERON:0001876;1.40e-08;2!UBERON:0002771;1.97e-08;2!UBERON:0007023;3.05e-08;114!UBERON:0004733;1.15e-07;12!UBERON:0002028;1.15e-07;12!UBERON:0004732;4.77e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.56e-55,22;UBERON:0001950,6.27e-55,20;UBERON:0001049,5.28e-49,56;UBERON:0005068,5.28e-49,56;UBERON:0006241,5.28e-49,56;UBERON:0007135,5.28e-49,56;UBERON:0000956,1.50e-48,25;UBERON:0000203,1.50e-48,25;UBERON:0000073,2.91e-48,53;UBERON:0002616,2.91e-48,53;UBERON:0001869,3.78e-46,32;UBERON:0001017,1.03e-44,81;UBERON:0000955,2.08e-44,68;UBERON:0006238,2.08e-44,68;UBERON:0001893,3.40e-43,34;UBERON:0003528,8.06e-43,34;UBERON:0002020,8.06e-43,34;UBERON:0002780,2.51e-42,41;UBERON:0001890,2.51e-42,41;UBERON:0003080,2.51e-42,41;UBERON:0006240,2.51e-42,41;UBERON:0002791,1.68e-41,32;UBERON:0001016,1.66e-39,89;UBERON:0003075,3.57e-36,82;UBERON:0007284,3.57e-36,82;UBERON:0002346,3.79e-34,86;UBERON:0003056,6.85e-32,61;UBERON:0010371,4.70e-29,104;UBERON:0010314,3.24e-21,132;UBERON:0004121,6.23e-21,171;UBERON:0000924,6.23e-21,171;UBERON:0006601,6.23e-21,171;UBERON:0007023,6.93e-21,114;UBERON:0002021,2.82e-19,5;UBERON:0001872,5.54e-19,5;UBERON:0000200,9.58e-16,6;UBERON:0000025,1.68e-14,192;UBERON:0001871,1.37e-13,6;UBERON:0011216,4.85e-13,223;UBERON:0000349,1.55e-12,5;UBERON:0002680,3.10e-10,9;UBERON:0001895,3.10e-10,9;UBERON:0010092,3.10e-10,9;UBERON:0004111,5.16e-10,240;UBERON:0000483,7.70e-09,306;UBERON:0001876,9.44e-09,2;UBERON:0000119,1.13e-08,309;UBERON:0003076,1.71e-08,15;UBERON:0003057,1.71e-08,15;UBERON:0002771,2.71e-08,2;UBERON:0004733,1.36e-07,12;UBERON:0002028,1.36e-07,12;UBERON:0007277,1.36e-07,12;UBERON:0004732,5.53e-07,13 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.547497700291537,0,0,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.175669571386252,1.11332214173056,0,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0.487894824518382,0.662648841607426,0.69716365721711,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.964044119533928,0.55146986366197,0.435758888184812,0.237270619111097,0.674156540800822,0.588664395376038,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.439001141634502,2.24803506515239,0.703702806881416,0.370353780634118,0,0,1.44331342025273,0.811512834825538,0,0,0,0,0,0.858486162094873,0.246217006087397,0,0.445893486866185,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0.12624243342638,0.253991577168676,1.14596527667483,1.17217447210047,1.71072446022705,0,1.20137223137567,0,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.106727557803444,0.606255142892519,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0.0920809889358963,0,0,0,0.902399225814824,0.308061348417659,5.49044838423799,0,0.105551628892876,0,0,0,0,0.270946437543853,2.00675909541941,0.764628819135115,0,1.34324852833307,0,0,0.769350375349168,0,0.976135183992909,0,0.54941678891006,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.192444225451024,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,1.28188885352968,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0.423347165447766,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,1.12284324244932,0,0,0,0.284136146806413,0.71623345421307,0,0,3.97659059106519,1.54736358051564,0,0,1.90012867315194,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,2.22643435588443,0,0.260427761085233,0.349839999984783,0,0.455173793141999,0.508507300585533,2.83665218121524,0,0.583209226766509,0.694499979733169,0,0.723578631752448,1.52581736317083,2.10100593869327,3.25102380848902,5.26524953169534,0.21787692703798,0.278847488557207,0.153900517007594,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0.865554558968364,0,0.176915129006678,0,0,0,0,0.808813595768125,0,2.10838001152805,0,0.391329237864179,0,0.394584402849391,0,0.61214552326098,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.261177619741208,0,0,0,0.511625219603299,0.246346371159628,0.0969890164884194,0.176512253383001,0.90392296312213,0,0,3.79864775735272,0.391102765469606,0,0.426905989478705,0.19980960958213,0,0.343609788497747,0,0,0,0.707082103850386,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.160753148465019,0,0.415440338029185,0,0,4.79921497598395,0.670869375198532,0,0.0524545881349981,0,0,0.575745591958336,0,0.662091970365432,0.5085370753095,0,0,0.326587360109409,0,0,0,0.339936274560377,0.146552233678082,0,1.16354660725395,0.39669780522807,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,2.56255156294123,1.251909307065,0.573409195690071,0.554645257684261,0.18628920882415,0.276697269872462,0,0.303298235083296,0.285465333544967,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0.308801447160972,0.657852148736121,0,0.192914038270915,0,0.256241518587947,0.690860683462397,0.303859956177382,1.10606748921385,0,0,0,0,0,0.422624246717254,0,0,0,0.567515953566836,0,0.559518030877778,0.622077260032973,0.511577485214607,0.754773679776773,0,0.327628914576042,0.169732529954025,0.212574920101683,0.495743057036009,0,0,0.0788617450012534,0,0,0,2.50493977876192,1.41696576325585,1.75597244962866,3.69209455633359,2.52071696221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| ||
|short_description=p2@RTN4R | |short_description=p2@RTN4R | ||
}} | }} |
Latest revision as of 04:42, 19 September 2015
Short description: | p2@RTN4R |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RTN4R_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 15bp_to_NM_023004, uc002zrv.2_5end |
EntrezGene: | RTN4R |
HGNC: | 18601 |
UniProt: | Q9BZR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.86e-11 | 3 |