FFCP PHASE1:Hg19::chr22:20105259..20105283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5902 | |EntrezGene=5902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9847 | |HGNC=9847 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIC6 | |UniProt=C9JIC6 | ||
|association_with_transcript=-21bp_to_ENST00000416427_5end | |association_with_transcript=-21bp_to_ENST00000416427_5end | ||
|cluster_id=chr22:20105259..20105283,+ | |||
|coexpression_cluster_id=C93 | |coexpression_cluster_id=C93 | ||
|description=CAGE_peak_3_at_RANBP1_5end | |description=CAGE_peak_3_at_RANBP1_5end | ||
|id=chr22:20105259..20105283,+ | |id=chr22:20105259..20105283,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.40e-17!248;CL:0000220!6.33e-17!246;CL:0000066!1.10e-16!254;CL:0000012!9.72e-14!682;CL:0000548!1.08e-13!679;CL:0000004!1.08e-13!679;CL:0000255!1.08e-13!679;CL:0000055!1.20e-09!180;CL:0000222!1.48e-08!119;CL:0000076!1.94e-08!62;CL:0000144!3.38e-07!625 | |ontology_enrichment_celltype=CL:0002321!1.40e-17!248;CL:0000220!6.33e-17!246;CL:0000066!1.10e-16!254;CL:0000012!9.72e-14!682;CL:0000548!1.08e-13!679;CL:0000004!1.08e-13!679;CL:0000255!1.08e-13!679;CL:0000055!1.20e-09!180;CL:0000222!1.48e-08!119;CL:0000076!1.94e-08!62;CL:0000144!3.38e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000147;8.10e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.89e-12,250;CL:0000066,1.92e-11,253;CL:0000148,5.86e-07,10;CL:0000541,5.86e-07,10;CL:0000222,6.50e-07,121;CL:0000076,7.46e-07,63;CL:0000147,8.80e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.20e-13!239;DOID:162!3.79e-13!235;DOID:8692!7.28e-07!31 | |ontology_enrichment_disease=DOID:14566!2.20e-13!239;DOID:162!3.79e-13!235;DOID:8692!7.28e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.32e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.11e-07,235;DOID:14566,2.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001981!1.78e-08!60;UBERON:0007500!1.78e-08!60;UBERON:0004537!1.78e-08!60;UBERON:0006965!1.78e-08!60;UBERON:0004872!1.97e-08!84;UBERON:0003914!1.29e-07!118;UBERON:0001637!1.42e-07!42;UBERON:0003509!1.42e-07!42;UBERON:0004572!1.42e-07!42;UBERON:0001737!1.64e-07!9;UBERON:0000055!8.63e-07!69 | |ontology_enrichment_uberon=UBERON:0001981!1.78e-08!60;UBERON:0007500!1.78e-08!60;UBERON:0004537!1.78e-08!60;UBERON:0006965!1.78e-08!60;UBERON:0004872!1.97e-08!84;UBERON:0003914!1.29e-07!118;UBERON:0001637!1.42e-07!42;UBERON:0003509!1.42e-07!42;UBERON:0004572!1.42e-07!42;UBERON:0001737!1.64e-07!9;UBERON:0000055!8.63e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.34e-09;9!UBERON:0001557;1.34e-09;9!UBERON:0000072;5.76e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.56e-09,9;UBERON:0001637,1.10e-07,42;UBERON:0003509,1.10e-07,42;UBERON:0004572,1.10e-07,42;UBERON:0007500,2.25e-07,59;UBERON:0001981,2.25e-07,59;UBERON:0004537,2.25e-07,59;UBERON:0006965,2.25e-07,59 | |||
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| ||
|short_description=p3@RANBP1 | |short_description=p3@RANBP1 | ||
}} | }} |
Latest revision as of 04:33, 19 September 2015
Short description: | p3@RANBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RANBP1_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | -21bp_to_ENST00000416427_5end |
EntrezGene: | RANBP1 |
HGNC: | 9847 |
UniProt: | C9JIC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.89e-12 | 250 |
epithelial cell | 1.92e-11 | 253 |
melanocyte | 5.86e-07 | 10 |
melanoblast | 5.86e-07 | 10 |
mesodermal cell | 6.50e-07 | 121 |
squamous epithelial cell | 7.46e-07 | 63 |
pigment cell | 8.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.56e-09 | 9 |
artery | 1.10e-07 | 42 |
arterial blood vessel | 1.10e-07 | 42 |
arterial system | 1.10e-07 | 42 |
epithelial tube open at both ends | 2.25e-07 | 59 |
blood vessel | 2.25e-07 | 59 |
blood vasculature | 2.25e-07 | 59 |
vascular cord | 2.25e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.11e-07 | 235 |
disease of cellular proliferation | 2.20e-07 | 239 |