FFCP PHASE1:Hg19::chr22:19939060..19939090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=15bp_to_NM_001135162,uc002zqx.2_5end | |association_with_transcript=15bp_to_NM_001135162,uc002zqx.2_5end | ||
|cluster_id=chr22:19939060..19939090,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_10_at_COMT_5end | |description=CAGE_peak_10_at_COMT_5end | ||
|id=chr22:19939060..19939090,+ | |id=chr22:19939060..19939090,+ | ||
|ontology_enrichment_celltype=CL:0000147!1.21e-19!14;CL:0000148!1.73e-12!10;CL:0000541!1.73e-12!10;CL:0000149!8.75e-10!4;CL:0002567!7.56e-09!3;CL:0000325!1.29e-07!39;CL:0002586!2.22e-07!3 | |ontology_enrichment_celltype=CL:0000147!1.21e-19!14;CL:0000148!1.73e-12!10;CL:0000541!1.73e-12!10;CL:0000149!8.75e-10!4;CL:0002567!7.56e-09!3;CL:0000325!1.29e-07!39;CL:0002586!2.22e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.31e-30;10!CL:0000147;1.27e-21;14!CL:0002567;7.41e-20;3!CL:0000710;7.22e-15;20!CL:0000075;7.41e-14;27!CL:0000182;1.72e-08;12!CL:0002566;1.07e-07;1!CL:0002077;1.59e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.28e-30,10;CL:0000541,1.28e-30,10;CL:0000147,1.26e-21,14;CL:0002567,7.42e-20,3;CL:0000710,7.15e-15,20;CL:0000075,8.03e-14,27;CL:0000182,1.72e-08,12;CL:0002077,2.27e-08,34;CL:0002566,1.03e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;2.26e-09;6!UBERON:0001896;8.91e-09;3!UBERON:0005290;8.91e-09;3!UBERON:0002107;4.83e-08;19!UBERON:0006925;4.83e-08;19!UBERON:0001301;1.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.26e-09,6;UBERON:0001896,9.66e-09,3;UBERON:0005290,9.66e-09,3;UBERON:0010096,9.66e-09,3;UBERON:0002107,4.87e-08,19;UBERON:0006925,4.87e-08,19;UBERON:0008836,4.87e-08,19;UBERON:0001301,1.95e-07,1;UBERON:0008835,6.62e-07,22;UBERON:0003894,6.62e-07,22 | |||
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| ||
|short_description=p10@COMT | |short_description=p10@COMT | ||
}} | }} |
Latest revision as of 04:03, 19 September 2015
Short description: | p10@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COMT_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 15bp_to_NM_001135162, uc002zqx.2_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.28e-30 | 10 |
melanoblast | 1.28e-30 | 10 |
pigment cell | 1.26e-21 | 14 |
light melanocyte | 7.42e-20 | 3 |
neurecto-epithelial cell | 7.15e-15 | 20 |
columnar/cuboidal epithelial cell | 8.03e-14 | 27 |
hepatocyte | 1.72e-08 | 12 |
ecto-epithelial cell | 2.27e-08 | 34 |
dark melanocyte | 1.03e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brainstem | 2.26e-09 | 6 |
medulla oblongata | 9.66e-09 | 3 |
myelencephalon | 9.66e-09 | 3 |
future myelencephalon | 9.66e-09 | 3 |
liver | 4.87e-08 | 19 |
digestive gland | 4.87e-08 | 19 |
liver bud | 4.87e-08 | 19 |
epididymis | 1.95e-07 | 1 |
hepatic diverticulum | 6.62e-07 | 22 |
liver primordium | 6.62e-07 | 22 |