FFCP PHASE1:Hg19::chr21:45788960..45788972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000498430,uc002zex.1_5end | |association_with_transcript=-31bp_to_ENST00000498430,uc002zex.1_5end | ||
|cluster_id=chr21:45788960..45788972,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_12_at_TRPM2_5end | |description=CAGE_peak_12_at_TRPM2_5end | ||
|id=chr21:45788960..45788972,+ | |id=chr21:45788960..45788972,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.77e-14!7;CL:0000586!2.77e-14!7;CL:0002553!5.05e-12!1 | |ontology_enrichment_celltype=CL:0000039!2.77e-14!7;CL:0000586!2.77e-14!7;CL:0002553!5.05e-12!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.11e-08;7!CL:0000586;2.11e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.03e-08,7;CL:0000586,2.03e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.32e-26;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;1.57e-110;4!UBERON:0002435;1.57e-110;4!UBERON:0000204;1.57e-110;4!UBERON:0005383;2.03e-66;3!UBERON:0005382;2.03e-66;3!UBERON:0009663;9.49e-64;7!UBERON:0001874;3.10e-50;1!UBERON:0001882;6.58e-50;1!UBERON:0005403;6.58e-50;1!UBERON:0002420;7.20e-50;9!UBERON:0000125;7.20e-50;9!UBERON:0007245;7.20e-50;9!UBERON:0002308;7.20e-50;9!UBERON:0010009;7.20e-50;9!UBERON:0010011;7.20e-50;9!UBERON:0000454;7.20e-50;9!UBERON:0001873;4.32e-26;2!UBERON:0002791;6.35e-15;32!UBERON:0001869;2.62e-13;32!UBERON:0003528;2.63e-13;34!UBERON:0002020;2.63e-13;34!UBERON:0001893;1.68e-12;34!UBERON:0000349;3.60e-11;5!UBERON:0002780;6.40e-10;41!UBERON:0001890;6.40e-10;41!UBERON:0000073;1.95e-08;53!UBERON:0002616;1.95e-08;53!UBERON:0000473;1.64e-07;8!UBERON:0000955;3.54e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.89e-110,4;UBERON:0002435,1.89e-110,4;UBERON:0000204,1.89e-110,4;UBERON:0010082,1.89e-110,4;UBERON:0005383,2.40e-66,3;UBERON:0005382,2.40e-66,3;UBERON:0009663,1.06e-63,7;UBERON:0001874,3.99e-50,1;UBERON:0001882,6.58e-50,1;UBERON:0005403,6.58e-50,1;UBERON:0002420,7.82e-50,9;UBERON:0000125,7.82e-50,9;UBERON:0007245,7.82e-50,9;UBERON:0002308,7.82e-50,9;UBERON:0010009,7.82e-50,9;UBERON:0010011,7.82e-50,9;UBERON:0000454,7.82e-50,9;UBERON:0001873,4.32e-26,2;UBERON:0010122,4.32e-26,2;UBERON:0002791,2.21e-14,32;UBERON:0001869,2.21e-14,32;UBERON:0003528,1.29e-13,34;UBERON:0002020,1.29e-13,34;UBERON:0001893,1.29e-13,34;UBERON:0002780,1.67e-11,41;UBERON:0001890,1.67e-11,41;UBERON:0003080,1.67e-11,41;UBERON:0006240,1.67e-11,41;UBERON:0000349,3.60e-11,5;UBERON:0000073,3.82e-09,53;UBERON:0002616,3.82e-09,53;UBERON:0001049,1.04e-08,56;UBERON:0005068,1.04e-08,56;UBERON:0006241,1.04e-08,56;UBERON:0007135,1.04e-08,56;UBERON:0003056,4.50e-08,61;UBERON:0000473,1.59e-07,8;UBERON:0000955,3.04e-07,68;UBERON:0006238,3.04e-07,68 | |||
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|short_description=p12@TRPM2 | |short_description=p12@TRPM2 | ||
}} | }} |
Latest revision as of 18:55, 18 September 2015
Short description: | p12@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TRPM2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -31bp_to_ENST00000498430, uc002zex.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.03e-08 | 7 |
germ cell | 2.03e-08 | 7 |