FFCP PHASE1:Hg19::chr20:5903783..5903796,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903783..5903796,+ | |||
|coexpression_cluster_id=C377 | |coexpression_cluster_id=C377 | ||
|description=CAGE_peak_at_chr20:5903783..5903796,+ | |description=CAGE_peak_at_chr20:5903783..5903796,+ | ||
|id=chr20:5903783..5903796,+ | |id=chr20:5903783..5903796,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.23e-59;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-62!57;UBERON:0005068!1.06e-62!57;UBERON:0006241!1.06e-62!57;UBERON:0007135!1.06e-62!57;UBERON:0002616!1.75e-56!59;UBERON:0000955!1.06e-49!69;UBERON:0006238!1.06e-49!69;UBERON:0001017!1.22e-49!82;UBERON:0005743!5.32e-47!86;UBERON:0000073!1.10e-44!94;UBERON:0001016!1.10e-44!94;UBERON:0003075!1.18e-44!86;UBERON:0007284!1.18e-44!86;UBERON:0002346!2.49e-42!90;UBERON:0002780!3.43e-40!41;UBERON:0001890!3.43e-40!41;UBERON:0006240!3.43e-40!41;UBERON:0003080!3.99e-39!42;UBERON:0007023!3.51e-36!115;UBERON:0002020!3.45e-32!34;UBERON:0003528!3.45e-32!34;UBERON:0001869!3.18e-30!32;UBERON:0001893!2.94e-28!34;UBERON:0000033!9.18e-27!123;UBERON:0004733!6.40e-26!12;UBERON:0002028!6.40e-26!12;UBERON:0007277!6.40e-26!12;UBERON:0002791!8.61e-26!33;UBERON:0003056!1.99e-25!61;UBERON:0000153!3.59e-25!129;UBERON:0007811!3.59e-25!129;UBERON:0003076!5.65e-25!15;UBERON:0003057!5.65e-25!15;UBERON:0004732!8.55e-24!13;UBERON:0000200!2.12e-23!6;UBERON:0004121!6.14e-23!169;UBERON:0000924!3.21e-22!173;UBERON:0006601!3.21e-22!173;UBERON:0002619!3.63e-22!22;UBERON:0000956!2.65e-19!25;UBERON:0000203!2.65e-19!25;UBERON:0002298!2.14e-17!8;UBERON:0003296!3.80e-17!4;UBERON:0010133!3.80e-17!4;UBERON:0001950!1.07e-16!20;UBERON:0002680!2.56e-16!9;UBERON:0001895!2.56e-16!9;UBERON:0010092!2.56e-16!9;UBERON:0000025!2.12e-15!194;UBERON:0002308!2.27e-15!9;UBERON:0000125!2.27e-15!9;UBERON:0001894!1.37e-14!7;UBERON:0006222!1.37e-14!7;UBERON:0000349!4.14e-13!5;UBERON:0000988!4.28e-13!3;UBERON:0002771!8.80e-13!3;UBERON:0001871!2.96e-12!7;UBERON:0001896!4.56e-12!3;UBERON:0005290!4.56e-12!3;UBERON:0010096!4.56e-12!3;UBERON:0004111!7.09e-11!241;UBERON:0002420!9.67e-11!9;UBERON:0007245!9.67e-11!9;UBERON:0010009!9.67e-11!9;UBERON:0010011!9.67e-11!9;UBERON:0000454!9.67e-11!9;UBERON:0000007!9.72e-10!2;UBERON:0000064!1.03e-09!219;UBERON:0001954!2.22e-09!2;UBERON:0003022!2.22e-09!2;UBERON:0002421!2.22e-09!2;UBERON:0002600!2.22e-09!2;UBERON:0000369!2.89e-09!4;UBERON:0002435!2.89e-09!4;UBERON:0000204!2.89e-09!4;UBERON:0010082!2.89e-09!4;UBERON:0002148!2.95e-09!2;UBERON:0009662!2.95e-09!2;UBERON:0001905!3.92e-09!2;UBERON:0002757!3.92e-09!2;UBERON:0010134!3.92e-09!2;UBERON:0002784!3.92e-09!2;UBERON:0005408!3.92e-09!2;UBERON:0001899!3.92e-09!2;UBERON:0009663!4.27e-09!7;UBERON:0000483!6.56e-09!309;UBERON:0000119!9.57e-09!312;UBERON:0000477!9.84e-09!286;UBERON:0002037!6.29e-07!6;UBERON:0006215!6.29e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!1.06e-62!57;UBERON:0005068!1.06e-62!57;UBERON:0006241!1.06e-62!57;UBERON:0007135!1.06e-62!57;UBERON:0002616!1.75e-56!59;UBERON:0000955!1.06e-49!69;UBERON:0006238!1.06e-49!69;UBERON:0001017!1.22e-49!82;UBERON:0005743!5.32e-47!86;UBERON:0000073!1.10e-44!94;UBERON:0001016!1.10e-44!94;UBERON:0003075!1.18e-44!86;UBERON:0007284!1.18e-44!86;UBERON:0002346!2.49e-42!90;UBERON:0002780!3.43e-40!41;UBERON:0001890!3.43e-40!41;UBERON:0006240!3.43e-40!41;UBERON:0003080!3.99e-39!42;UBERON:0007023!3.51e-36!115;UBERON:0002020!3.45e-32!34;UBERON:0003528!3.45e-32!34;UBERON:0001869!3.18e-30!32;UBERON:0001893!2.94e-28!34;UBERON:0000033!9.18e-27!123;UBERON:0004733!6.40e-26!12;UBERON:0002028!6.40e-26!12;UBERON:0007277!6.40e-26!12;UBERON:0002791!8.61e-26!33;UBERON:0003056!1.99e-25!61;UBERON:0000153!3.59e-25!129;UBERON:0007811!3.59e-25!129;UBERON:0003076!5.65e-25!15;UBERON:0003057!5.65e-25!15;UBERON:0004732!8.55e-24!13;UBERON:0000200!2.12e-23!6;UBERON:0004121!6.14e-23!169;UBERON:0000924!3.21e-22!173;UBERON:0006601!3.21e-22!173;UBERON:0002619!3.63e-22!22;UBERON:0000956!2.65e-19!25;UBERON:0000203!2.65e-19!25;UBERON:0002298!2.14e-17!8;UBERON:0003296!3.80e-17!4;UBERON:0010133!3.80e-17!4;UBERON:0001950!1.07e-16!20;UBERON:0002680!2.56e-16!9;UBERON:0001895!2.56e-16!9;UBERON:0010092!2.56e-16!9;UBERON:0000025!2.12e-15!194;UBERON:0002308!2.27e-15!9;UBERON:0000125!2.27e-15!9;UBERON:0001894!1.37e-14!7;UBERON:0006222!1.37e-14!7;UBERON:0000349!4.14e-13!5;UBERON:0000988!4.28e-13!3;UBERON:0002771!8.80e-13!3;UBERON:0001871!2.96e-12!7;UBERON:0001896!4.56e-12!3;UBERON:0005290!4.56e-12!3;UBERON:0010096!4.56e-12!3;UBERON:0004111!7.09e-11!241;UBERON:0002420!9.67e-11!9;UBERON:0007245!9.67e-11!9;UBERON:0010009!9.67e-11!9;UBERON:0010011!9.67e-11!9;UBERON:0000454!9.67e-11!9;UBERON:0000007!9.72e-10!2;UBERON:0000064!1.03e-09!219;UBERON:0001954!2.22e-09!2;UBERON:0003022!2.22e-09!2;UBERON:0002421!2.22e-09!2;UBERON:0002600!2.22e-09!2;UBERON:0000369!2.89e-09!4;UBERON:0002435!2.89e-09!4;UBERON:0000204!2.89e-09!4;UBERON:0010082!2.89e-09!4;UBERON:0002148!2.95e-09!2;UBERON:0009662!2.95e-09!2;UBERON:0001905!3.92e-09!2;UBERON:0002757!3.92e-09!2;UBERON:0010134!3.92e-09!2;UBERON:0002784!3.92e-09!2;UBERON:0005408!3.92e-09!2;UBERON:0001899!3.92e-09!2;UBERON:0009663!4.27e-09!7;UBERON:0000483!6.56e-09!309;UBERON:0000119!9.57e-09!312;UBERON:0000477!9.84e-09!286;UBERON:0002037!6.29e-07!6;UBERON:0006215!6.29e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.10e-45;4!UBERON:0010133;3.10e-45;4!UBERON:0000007;5.99e-41;2!UBERON:0002680;3.04e-35;9!UBERON:0001895;3.04e-35;9!UBERON:0002037;3.75e-30;6!UBERON:0004733;1.41e-26;12!UBERON:0002028;1.41e-26;12!UBERON:0001894;3.17e-26;7!UBERON:0004732;1.42e-24;13!UBERON:0000073;2.51e-15;53!UBERON:0002616;2.51e-15;53!UBERON:0001905;3.70e-11;2!UBERON:0001954;3.70e-11;2!UBERON:0002148;3.70e-11;2!UBERON:0002757;3.70e-11;2!UBERON:0010134;3.70e-11;2!UBERON:0006331;3.70e-11;2!UBERON:0009662;3.70e-11;2!UBERON:0003022;3.70e-11;2!UBERON:0005408;3.70e-11;2!UBERON:0002421;3.70e-11;2!UBERON:0001899;3.70e-11;2!UBERON:0002600;3.70e-11;2!UBERON:0000955;5.71e-11;68!UBERON:0000988;7.26e-08;3!UBERON:0001016;1.17e-07;83!UBERON:0002780;4.25e-07;41!UBERON:0001890;4.25e-07;41!UBERON:0001017;5.07e-07;75!UBERON:0007023;5.63e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.66e-45,4;UBERON:0010133,2.66e-45,4;UBERON:0000007,4.89e-41,2;UBERON:0002680,3.04e-35,9;UBERON:0001895,3.04e-35,9;UBERON:0010092,3.04e-35,9;UBERON:0002037,4.15e-30,6;UBERON:0006215,4.15e-30,6;UBERON:0004733,1.41e-26,12;UBERON:0002028,1.41e-26,12;UBERON:0007277,1.41e-26,12;UBERON:0001894,2.91e-26,7;UBERON:0006222,2.91e-26,7;UBERON:0004732,1.42e-24,13;UBERON:0000073,4.60e-23,53;UBERON:0002616,4.60e-23,53;UBERON:0001049,7.72e-22,56;UBERON:0005068,7.72e-22,56;UBERON:0006241,7.72e-22,56;UBERON:0007135,7.72e-22,56;UBERON:0003076,2.29e-21,15;UBERON:0003057,2.29e-21,15;UBERON:0000955,9.74e-18,68;UBERON:0006238,9.74e-18,68;UBERON:0001017,6.49e-15,81;UBERON:0003075,6.49e-15,82;UBERON:0007284,6.49e-15,82;UBERON:0002346,3.25e-14,86;UBERON:0001016,2.01e-13,89;UBERON:0010371,1.02e-11,104;UBERON:0002148,3.35e-11,2;UBERON:0006331,3.35e-11,2;UBERON:0009662,3.35e-11,2;UBERON:0001905,3.70e-11,2;UBERON:0002757,3.70e-11,2;UBERON:0010134,3.70e-11,2;UBERON:0005408,3.70e-11,2;UBERON:0001899,3.70e-11,2;UBERON:0001954,4.09e-11,2;UBERON:0003022,4.09e-11,2;UBERON:0002421,4.09e-11,2;UBERON:0002600,4.09e-11,2;UBERON:0007023,9.20e-11,114;UBERON:0010314,3.64e-09,132;UBERON:0002780,6.24e-08,41;UBERON:0001890,6.24e-08,41;UBERON:0003080,6.24e-08,41;UBERON:0006240,6.24e-08,41;UBERON:0000988,6.78e-08,3;UBERON:0004121,6.80e-07,171;UBERON:0000924,6.80e-07,171;UBERON:0006601,6.80e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.694499979733169,0,0.482385754501632,3.05163472634166,1.99042667876204,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.98348902614035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0.751145584238999,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.0691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0,0,0,0,0,0,1.60710550763486,0.336283722218824,10.3184152720227,3.41493287026946,0,0,0,0.951576261675644,0.263091094251396,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95278488226157,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,3.29222107453066,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.694499979733169,0,0.482385754501632,3.05163472634166,1.99042667876204,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.98348902614035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0.751145584238999,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.0691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0,0,0,0,0,0,1.60710550763486,0.336283722218824,10.3184152720227,3.41493287026946,0,0,0,0.951576261675644,0.263091094251396,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95278488226157,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,3.29222107453066,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:5903783..5903796,+ | |short_description=p@chr20:5903783..5903796,+ | ||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903783..5903796, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903783..5903796, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data