FFCP PHASE1:Hg19::chr1:63153579..63153605,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:63153579..63153605,+ | |||
|coexpression_cluster_id=C1116 | |coexpression_cluster_id=C1116 | ||
|description=CAGE_peak_at_chr1:63153579..63153605,+ | |description=CAGE_peak_at_chr1:63153579..63153605,+ | ||
|id=chr1:63153579..63153605,+ | |id=chr1:63153579..63153605,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.03e-14;2!CL:0000197;3.02e-11;6!CL:0000098;3.02e-11;6!CL:0002167;3.02e-11;6!CL:0000182;2.40e-09;12!CL:0000222;1.13e-08;1!CL:0002032;3.32e-08;1!CL:0000228;3.32e-08;1!CL:0000557;3.32e-08;1!CL:0002372;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.93e-11,6;CL:0000098,2.93e-11,6;CL:0002167,2.93e-11,6;CL:0000182,2.30e-09,12;CL:0000228,2.17e-08,1;CL:0002372,2.17e-08,1;CL:0000047,2.56e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.49e-10;11!UBERON:0006241;4.10e-10;3!UBERON:0003057;4.10e-10;3!UBERON:0009497;1.23e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.05e-08;1!DOID:4549;1.05e-08;1!DOID:5861;1.05e-08;1!DOID:6496;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.05e-08,1;DOID:4549,1.05e-08,1;DOID:5861,1.05e-08,1;DOID:6496,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.26e-24!82;UBERON:0005743!3.66e-23!86;UBERON:0000073!1.16e-21!94;UBERON:0001016!1.16e-21!94;UBERON:0001049!1.29e-18!57;UBERON:0005068!1.29e-18!57;UBERON:0006241!1.29e-18!57;UBERON:0007135!1.29e-18!57;UBERON:0000955!2.83e-17!69;UBERON:0006238!2.83e-17!69;UBERON:0002791!8.47e-17!33;UBERON:0002346!2.88e-16!90;UBERON:0001893!5.09e-16!34;UBERON:0002020!5.13e-16!34;UBERON:0003528!5.13e-16!34;UBERON:0003075!5.85e-16!86;UBERON:0007284!5.85e-16!86;UBERON:0001869!6.98e-16!32;UBERON:0002616!1.05e-15!59;UBERON:0002780!2.50e-15!41;UBERON:0001890!2.50e-15!41;UBERON:0006240!2.50e-15!41;UBERON:0003080!1.04e-14!42;UBERON:0000956!1.09e-13!25;UBERON:0000203!1.09e-13!25;UBERON:0000924!8.31e-12!173;UBERON:0006601!8.31e-12!173;UBERON:0004121!2.00e-11!169;UBERON:0003056!3.53e-11!61;UBERON:0002619!4.02e-11!22;UBERON:0001950!4.63e-11!20;UBERON:0000153!2.31e-10!129;UBERON:0007811!2.31e-10!129;UBERON:0000033!1.48e-09!123;UBERON:0000475!2.71e-09!365;UBERON:0007023!1.44e-08!115;UBERON:0001871!8.78e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!7.26e-24!82;UBERON:0005743!3.66e-23!86;UBERON:0000073!1.16e-21!94;UBERON:0001016!1.16e-21!94;UBERON:0001049!1.29e-18!57;UBERON:0005068!1.29e-18!57;UBERON:0006241!1.29e-18!57;UBERON:0007135!1.29e-18!57;UBERON:0000955!2.83e-17!69;UBERON:0006238!2.83e-17!69;UBERON:0002791!8.47e-17!33;UBERON:0002346!2.88e-16!90;UBERON:0001893!5.09e-16!34;UBERON:0002020!5.13e-16!34;UBERON:0003528!5.13e-16!34;UBERON:0003075!5.85e-16!86;UBERON:0007284!5.85e-16!86;UBERON:0001869!6.98e-16!32;UBERON:0002616!1.05e-15!59;UBERON:0002780!2.50e-15!41;UBERON:0001890!2.50e-15!41;UBERON:0006240!2.50e-15!41;UBERON:0003080!1.04e-14!42;UBERON:0000956!1.09e-13!25;UBERON:0000203!1.09e-13!25;UBERON:0000924!8.31e-12!173;UBERON:0006601!8.31e-12!173;UBERON:0004121!2.00e-11!169;UBERON:0003056!3.53e-11!61;UBERON:0002619!4.02e-11!22;UBERON:0001950!4.63e-11!20;UBERON:0000153!2.31e-10!129;UBERON:0007811!2.31e-10!129;UBERON:0000033!1.48e-09!123;UBERON:0000475!2.71e-09!365;UBERON:0007023!1.44e-08!115;UBERON:0001871!8.78e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;4.10e-10;3!UBERON:0005174;4.10e-10;3!UBERON:0001137;4.10e-10;3!UBERON:0002336;3.32e-08;1!UBERON:0011215;3.32e-08;1!UBERON:0001018;3.32e-08;1!UBERON:0002473;3.32e-08;1!UBERON:0005340;3.32e-08;1!UBERON:0003544;3.32e-08;1!UBERON:0005970;3.32e-08;1!UBERON:0002316;3.32e-08;1!UBERON:0001020;3.32e-08;1!UBERON:0002437;3.32e-08;1!UBERON:0001950;5.26e-08;20!UBERON:0002619;2.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-11,81;UBERON:0002240,3.27e-10,3;UBERON:0005174,3.27e-10,3;UBERON:0001137,3.27e-10,3;UBERON:0001016,3.76e-10,89;UBERON:0001049,2.57e-08,56;UBERON:0005068,2.57e-08,56;UBERON:0006241,2.57e-08,56;UBERON:0007135,2.57e-08,56;UBERON:0002336,3.83e-08,1;UBERON:0011215,3.83e-08,1;UBERON:0001018,3.83e-08,1;UBERON:0002473,3.83e-08,1;UBERON:0005340,3.83e-08,1;UBERON:0003544,3.83e-08,1;UBERON:0005970,3.83e-08,1;UBERON:0002316,3.83e-08,1;UBERON:0001020,3.83e-08,1;UBERON:0002437,3.83e-08,1;UBERON:0001950,5.52e-08,20;UBERON:0002346,1.37e-07,86;UBERON:0002619,2.85e-07,22 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0,0.313454721478088,0.85870796139317,0.821246550437305,0.753255837568817,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.484938170456436,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.958499421966331,0,1.42636905040718,0,0.410952645100767,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0,1.91381625495949,0,0,0,0,0,0,1.24782516918484,3.56857977594324,2.99634588564476,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0.303127571446259,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,0.846016147141356,0,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0,0,0.322260734604821,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,20.2120769605305,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0.994147647766298,0.844016498463076,0.111308705022906,0,0,0,0.552567831062295,0,0.20453736500431,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.463840490809256,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0.60298219312704,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,1.21322039365219,0,0.702793337176017,0,0,0.242780379534093,0,0,1.22429104652196,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,14.474004777406,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.101998217636322,0,0.600420288709789,0.547621515567972,1.27746588066972,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0.201550417460179,0,1.16495949527454,1.26053091691558,1.2362378757175,1.3480708770837,0,0,0,0.817220436669454,0.643012593860077,0.550157746388935,0.415440338029185,0.2249738915515,0,0.607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,1.19009341568421,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0.610131324509816,1.001527445652,0,0.776503360757966,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0,0,0,0,12.6184898228651,0.385239660814607,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,1.06287460050841,0,0.558644917973244,0,0,0,0,0.3062454773532,0.513833800771676,0,1.43670473151436,0.615349092722265,1.51243017733031,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0.781514011233092,0.261906694481422,0,0,0,0,0.620060389503552,0.126831620387814,1.09394961803644,0,0.496211178389294,0.175871244359621,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0.280272163313789,0,0,0,4.07416301806941,0,0.23248285073625,0.347716544605159,0,0,0,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| ||
|short_description=p@chr1:63153579..63153605,+ | |short_description=p@chr1:63153579..63153605,+ | ||
}} | }} |
Latest revision as of 09:37, 28 July 2015
Short description: | p@chr1:63153579..63153605, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:63153579..63153605, + |
Coexpression cluster: | C1116_Wilms_extraskeletal_mesodermal_retina_Olfactory_leiomyoblastoma_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.93e-11 | 6 |
sensory epithelial cell | 2.93e-11 | 6 |
olfactory epithelial cell | 2.93e-11 | 6 |
hepatocyte | 2.30e-09 | 12 |
multinucleate cell | 2.17e-08 | 1 |
myotube | 2.17e-08 | 1 |
neuronal stem cell | 2.56e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.63e-11 | 81 |
spinal cord | 3.27e-10 | 3 |
dorsal region element | 3.27e-10 | 3 |
dorsum | 3.27e-10 | 3 |
nervous system | 3.76e-10 | 89 |
neural tube | 2.57e-08 | 56 |
neural rod | 2.57e-08 | 56 |
future spinal cord | 2.57e-08 | 56 |
neural keel | 2.57e-08 | 56 |
corpus callosum | 3.83e-08 | 1 |
central nervous system cell part cluster | 3.83e-08 | 1 |
axon tract | 3.83e-08 | 1 |
intercerebral commissure | 3.83e-08 | 1 |
dorsal telencephalic commissure | 3.83e-08 | 1 |
brain white matter | 3.83e-08 | 1 |
brain commissure | 3.83e-08 | 1 |
white matter | 3.83e-08 | 1 |
nervous system commissure | 3.83e-08 | 1 |
cerebral hemisphere white matter | 3.83e-08 | 1 |
neocortex | 5.52e-08 | 20 |
neurectoderm | 1.37e-07 | 86 |
regional part of cerebral cortex | 2.85e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.05e-08 | 1 |
extraosseous chondrosarcoma | 1.05e-08 | 1 |
myxoid chondrosarcoma | 1.05e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.05e-08 | 1 |