FFCP PHASE1:Hg19::chr1:62902414..62902438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7398 | |EntrezGene=7398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12607 | |HGNC=12607 | ||
|TSSclassifier=strong | |||
|UniProt=O94782 | |UniProt=O94782 | ||
|association_with_transcript=31bp_to_NM_003368,uc001dal.1_5end | |association_with_transcript=31bp_to_NM_003368,uc001dal.1_5end | ||
|cluster_id=chr1:62902414..62902438,+ | |||
|coexpression_cluster_id=C255 | |coexpression_cluster_id=C255 | ||
|description=CAGE_peak_5_at_USP1_5end | |description=CAGE_peak_5_at_USP1_5end | ||
|id=chr1:62902414..62902438,+ | |id=chr1:62902414..62902438,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.42e-07!165;CL:0000837!1.42e-07!165;CL:0000037!2.31e-07!172;CL:0000566!2.31e-07!172;CL:0000988!4.22e-07!182 | |ontology_enrichment_celltype=CL:0002032!1.42e-07!165;CL:0000837!1.42e-07!165;CL:0000037!2.31e-07!172;CL:0000566!2.31e-07!172;CL:0000988!4.22e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.32e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.75e-07,161;CL:0000837,4.75e-07,161;CL:0000097,6.84e-07,5;CL:0002028,6.84e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.70e-28!235;DOID:14566!4.88e-27!239;DOID:0050687!7.42e-16!143;DOID:305!4.33e-15!106;DOID:0050686!4.86e-14!137;DOID:2531!9.78e-14!51;DOID:0060083!9.78e-14!51;DOID:1240!8.12e-12!39;DOID:8692!1.01e-09!31 | |ontology_enrichment_disease=DOID:162!2.70e-28!235;DOID:14566!4.88e-27!239;DOID:0050687!7.42e-16!143;DOID:305!4.33e-15!106;DOID:0050686!4.86e-14!137;DOID:2531!9.78e-14!51;DOID:0060083!9.78e-14!51;DOID:1240!8.12e-12!39;DOID:8692!1.01e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.33e-14;39!DOID:8692;3.94e-13;31!DOID:2531;2.18e-11;51!DOID:0060083;2.18e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.52e-28,235;DOID:14566,8.86e-27,239;DOID:1240,7.69e-18,39;DOID:2531,1.47e-17,51;DOID:0060083,1.47e-17,51;DOID:0050687,7.05e-17,143;DOID:305,1.52e-14,106;DOID:0050686,5.35e-14,137;DOID:8692,5.76e-14,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.20e-09;9!UBERON:0001557;2.20e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.56e-10,9;UBERON:0001557,3.02e-07,19 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0.873765488520689,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,1.09499540058307,0.87879847716362,0.534893840235659,0.985207073399349,0.787107813136792,0,0,0.619264493264304,0,0,0,3.87336002901508,0.568676929949686,0.880801318004542,0.553995408531877,0,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0.755751887377619,0,0.929716147622738,0.411167888021826,1.23882548358041,0,1.0246428261164,0.945928919554341,0.689491361473237,1.93645405075148,0,0.752969358170419,0.818718450173537,0.674170453335254,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,0.290209238628584,0.56738522469114,1.86846674698672,0.251248665256743,2.08593167368081,0.65156653411535,0,1.10483290796269,0.316462387440884,0,0.212604299965044,0.419317291016752,0.22465726229299,0.300353785683013,0,0.285012743741249,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.800791974072025,1.72425731986345,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0.526768169550154,0.393419540227666,0,1.64481199199607,0.668745981562712,0.32592226663359,0,0,0.668462741311041,0.883817722424512,0.664601683750863,0.812411591295047,0.25618263945135,0.520237390239513,1.47994114143309,1.10540007114339,1.73881851441031,0.593146252648242,0.535081656179426,0,0.906474741580529,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0,1.64225599384209,0.403213486449465,0.534880391567015,0,0,0,0.767175371061182,0.722878304769133,0,0.289693037921647,0,0,0.472674085820339,0.221729397462564,0.702678285545008,0.458426764241994,0,0.370784442784429,0.324547393654683,0.174129737299267,0.531831842075461,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0.347140501607594,1.13061588384802,0.838998872419812,0,0.208994966536811,0.516833518338658,0,0,0,1.52054421143703,0,0.735326160691737,0,0.803697554556718,1.34717623575702,1.23872628531654,0,0.949265659568129,0.183201743930407,0,0,0,0,0.506522046658319,0,0.286836620748814,0,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.151357427644931,0,0.468642863667593,0,0,0.149448680551801,0.939475989150119,0.971237666208789,0.98315564691574,0.204154171254893,0.491337269247072,0.103325781175765,0,0.989067717114227,0,0,0,0.500474079487857,0.554128230968366,0,0,0.150238058906597,0.340296549480063,1.25572744982203,0,0.423863802319124,0,0.309157587715317,0.772921620136887,0.18611685633159,0.337552664482532,0.292311015483596,0.504867548488229,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0.508681776931463,0.193260853163297,0,0.573609190778008,0.731842236777572,0.265059536642971,0.464775771478074,0.207322110030741,0.756962552626885,1.09493207722749,0,0,0,0,0,2.24782920075703,1.85443159085912,1.44606617930089,1.65440959098591,1.52515610864684,1.89816495288877,1.34831308160164,1.56977172100277,1.15424147083917,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.368965315629341,0,0.329250856225877,1.1240175325762,0.301586917234893,0.277765335475589,0,0,1.44331342025273,0,0.234817388471643,0,0,0.570762456703795,1.58040879591855,1.71697232418975,0.246217006087397,1.40402559083543,0.891786973732369,0,0,0.283550194484773,1.52249488594842,2.03443756959773,0,2.95597942737566,1.14462964217194,2.48793738648926,1.44119953416961,2.39860623510122,0.444485260045183,0.381988425558278,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0.112131084345361,0,0.51336800074665,0,0,0.845302752556,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0.821905290201534,0.179060963239896,1.00876629594175,0.197030760201927,0,0.385029108839245,0,0,0.773288812777695,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.585707074963566,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0.343143423810856,0.413536052245775,0,0.426910231213777,1.5156378572313,0,0.604780586659361,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.616838775210622,0.532685175939381,0.574890092096664,0,0.348631135379878,0.604297247958111,0,0.0920809889358963,0.918515585316854,0.546273504020151,0,0,0.462092022626489,0,0,0.633309773357254,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0,5.92001666944023,4.96727356947311,0.769350375349168,0,0.325378394664303,0.412164046590889,1.46511143709349,1.23764249880882,0.574265537996172,0,0,0.48335359146061,0.154048617114644,0.614014698904518,1.10269257987624,0.322260734604821,0,0.596586391912706,0.356128142586949,0.330569830721956,0,0.382838137483752,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,1.056501467567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| ||
|short_description=p5@USP1 | |short_description=p5@USP1 | ||
}} | }} |
Latest revision as of 20:03, 18 September 2015
Short description: | p5@USP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_USP1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 31bp_to_NM_003368, uc001dal.1_5end |
EntrezGene: | USP1 |
HGNC: | 12607 |
UniProt: | O94782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-07 | 161 |
mast cell | 6.84e-07 | 5 |
basophil mast progenitor cell | 6.84e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.56e-10 | 9 |
upper respiratory tract | 3.02e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.52e-28 | 235 |
disease of cellular proliferation | 8.86e-27 | 239 |
leukemia | 7.69e-18 | 39 |
hematologic cancer | 1.47e-17 | 51 |
immune system cancer | 1.47e-17 | 51 |
cell type cancer | 7.05e-17 | 143 |
carcinoma | 1.52e-14 | 106 |
organ system cancer | 5.35e-14 | 137 |
myeloid leukemia | 5.76e-14 | 31 |