FFCP PHASE1:Hg19::chr1:62660375..62660393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54596 | |EntrezGene=54596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25595 | |HGNC=25595 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7N2 | |UniProt=Q5T7N2 | ||
|association_with_transcript=-80bp_to_NM_001164835,NM_019079_5end | |association_with_transcript=-80bp_to_NM_001164835,NM_019079_5end | ||
|cluster_id=chr1:62660375..62660393,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_4_at_L1TD1_5end | |description=CAGE_peak_4_at_L1TD1_5end | ||
|id=chr1:62660375..62660393,+ | |id=chr1:62660375..62660393,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.35e-40!5;CL:0000039!4.78e-18!7;CL:0000586!4.78e-18!7;CL:0000540!2.23e-12!6;CL:0000031!2.23e-12!6;CL:0000404!2.23e-12!6;CL:0000349!3.79e-11!3;CL:0002577!3.79e-11!3;CL:0000047!2.07e-09!8;CL:0000148!9.52e-08!10;CL:0000541!9.52e-08!10;CL:0002537!5.64e-07!5 | |ontology_enrichment_celltype=CL:0002322!5.35e-40!5;CL:0000039!4.78e-18!7;CL:0000586!4.78e-18!7;CL:0000540!2.23e-12!6;CL:0000031!2.23e-12!6;CL:0000404!2.23e-12!6;CL:0000349!3.79e-11!3;CL:0002577!3.79e-11!3;CL:0000047!2.07e-09!8;CL:0000148!9.52e-08!10;CL:0000541!9.52e-08!10;CL:0002537!5.64e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.39e-90;5!CL:0002321;2.99e-30;15!CL:0000148;6.90e-17;10!CL:0000540;6.50e-13;6!CL:0000404;6.50e-13;6!CL:0000147;2.95e-12;14!CL:0000039;1.97e-11;7!CL:0000586;1.97e-11;7!CL:0000710;9.23e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.73e-90,5;CL:0000148,6.19e-17,10;CL:0000541,6.19e-17,10;CL:0000540,6.90e-13,6;CL:0000031,6.90e-13,6;CL:0000404,6.90e-13,6;CL:0000147,2.74e-12,14;CL:0000039,2.07e-11,7;CL:0000586,2.07e-11,7;CL:0000047,6.63e-10,8;CL:0000710,8.75e-09,20;CL:0000133,1.86e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;6.50e-13;6!UBERON:0009117;2.82e-08;10!UBERON:0005564;2.82e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!1.01e-08!22;DOID:2994!1.01e-08!22 | |ontology_enrichment_disease=DOID:3095!1.01e-08!22;DOID:2994!1.01e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.95e-08;22!DOID:2994;4.95e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.19e-16!8;UBERON:0003135!1.36e-11!11;UBERON:0005631!6.85e-09!14;UBERON:0000158!6.85e-09!14;UBERON:0003101!1.24e-08!22;UBERON:0000079!1.24e-08!22;UBERON:0001987!1.40e-08!4;UBERON:0004340!1.40e-08!4 | |ontology_enrichment_uberon=UBERON:0000473!7.19e-16!8;UBERON:0003135!1.36e-11!11;UBERON:0005631!6.85e-09!14;UBERON:0000158!6.85e-09!14;UBERON:0003101!1.24e-08!22;UBERON:0000079!1.24e-08!22;UBERON:0001987!1.40e-08!4;UBERON:0004340!1.40e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.69e-12;49!UBERON:0000473;4.03e-10;8!UBERON:0003135;1.33e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.22e-10,8;UBERON:0003135,1.37e-07,11 | |||
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|short_description=p4@L1TD1 | |short_description=p4@L1TD1 | ||
}} | }} |
Latest revision as of 19:24, 18 September 2015
Short description: | p4@L1TD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_L1TD1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -80bp_to_NM_001164835, NM_019079_5end |
EntrezGene: | L1TD1 |
HGNC: | 25595 |
UniProt: | Q5T7N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.73e-90 | 5 |
melanocyte | 6.19e-17 | 10 |
melanoblast | 6.19e-17 | 10 |
neuron | 6.90e-13 | 6 |
neuroblast | 6.90e-13 | 6 |
electrically signaling cell | 6.90e-13 | 6 |
pigment cell | 2.74e-12 | 14 |
germ line cell | 2.07e-11 | 7 |
germ cell | 2.07e-11 | 7 |
neuronal stem cell | 6.63e-10 | 8 |
neurecto-epithelial cell | 8.75e-09 | 20 |
neurectodermal cell | 1.86e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 4.22e-10 | 8 |
male reproductive organ | 1.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.01e-08 | 22 |
germ cell cancer | 5.01e-08 | 22 |