FFCP PHASE1:Hg19::chr1:53377301..53377310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55268 | |EntrezGene=55268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23408 | |HGNC=23408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000543419_5end | |association_with_transcript=16bp_to_ENST00000543419_5end | ||
|cluster_id=chr1:53377301..53377310,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_ECHDC2_5end | |description=CAGE_peak_8_at_ECHDC2_5end | ||
|id=chr1:53377301..53377310,- | |id=chr1:53377301..53377310,- | ||
|ontology_enrichment_celltype=CL:0000181!1.51e-09!12;CL:0000417!1.51e-09!12;CL:0000668!1.51e-09!12;CL:0000414!1.51e-09!12;CL:0000412!1.51e-09!12;CL:0000182!1.51e-09!12;CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7;CL:1000415!4.98e-07!2 | |ontology_enrichment_celltype=CL:0000181!1.51e-09!12;CL:0000417!1.51e-09!12;CL:0000668!1.51e-09!12;CL:0000414!1.51e-09!12;CL:0000412!1.51e-09!12;CL:0000182!1.51e-09!12;CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7;CL:1000415!4.98e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.98e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.98e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!4.23e-13!1;UBERON:0007190!9.73e-13!1;UBERON:0002368!7.57e-12!35;UBERON:0009497!7.97e-12!25;UBERON:0000015!7.97e-12!25;UBERON:0002423!7.97e-12!25;UBERON:0006235!7.97e-12!25;UBERON:0004161!7.97e-12!25;UBERON:0005057!2.39e-11!26;UBERON:0002107!2.36e-10!19;UBERON:0006925!2.36e-10!19;UBERON:0008836!2.36e-10!19;UBERON:0003135!4.16e-10!11;UBERON:0000949!3.93e-09!45;UBERON:0008835!5.72e-09!22;UBERON:0003894!5.72e-09!22;UBERON:0009854!1.38e-08!23;UBERON:0007499!6.50e-08!25;UBERON:0001894!1.21e-07!7;UBERON:0006222!1.21e-07!7;UBERON:0009856!1.29e-07!26;UBERON:0003929!1.68e-07!54;UBERON:0005172!2.12e-07!55;UBERON:0005173!2.12e-07!55;UBERON:0000007!3.09e-07!2;UBERON:0001897!3.93e-07!2;UBERON:0002530!7.19e-07!59 | |ontology_enrichment_uberon=UBERON:0001301!4.23e-13!1;UBERON:0007190!9.73e-13!1;UBERON:0002368!7.57e-12!35;UBERON:0009497!7.97e-12!25;UBERON:0000015!7.97e-12!25;UBERON:0002423!7.97e-12!25;UBERON:0006235!7.97e-12!25;UBERON:0004161!7.97e-12!25;UBERON:0005057!2.39e-11!26;UBERON:0002107!2.36e-10!19;UBERON:0006925!2.36e-10!19;UBERON:0008836!2.36e-10!19;UBERON:0003135!4.16e-10!11;UBERON:0000949!3.93e-09!45;UBERON:0008835!5.72e-09!22;UBERON:0003894!5.72e-09!22;UBERON:0009854!1.38e-08!23;UBERON:0007499!6.50e-08!25;UBERON:0001894!1.21e-07!7;UBERON:0006222!1.21e-07!7;UBERON:0009856!1.29e-07!26;UBERON:0003929!1.68e-07!54;UBERON:0005172!2.12e-07!55;UBERON:0005173!2.12e-07!55;UBERON:0000007!3.09e-07!2;UBERON:0001897!3.93e-07!2;UBERON:0002530!7.19e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.54e-28;19!UBERON:0006925;3.54e-28;19!UBERON:0002423;1.35e-21;25!UBERON:0002365;4.09e-18;31!UBERON:0002330;4.09e-18;31!UBERON:0002368;1.39e-14;33!UBERON:0000949;2.99e-12;43!UBERON:0005172;4.80e-09;52!UBERON:0005173;4.80e-09;52!UBERON:0002530;7.91e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.54e-28,19;UBERON:0006925,3.54e-28,19;UBERON:0008836,3.54e-28,19;UBERON:0008835,1.93e-24,22;UBERON:0003894,1.93e-24,22;UBERON:0009854,2.07e-23,23;UBERON:0007499,1.35e-21,25;UBERON:0009497,1.35e-21,25;UBERON:0000015,1.35e-21,25;UBERON:0002423,1.35e-21,25;UBERON:0006235,1.35e-21,25;UBERON:0004161,1.35e-21,25;UBERON:0009856,8.56e-21,26;UBERON:0002365,1.49e-17,31;UBERON:0002330,1.49e-17,31;UBERON:0002368,1.27e-15,35;UBERON:0000949,2.74e-12,45;UBERON:0003929,2.46e-10,54;UBERON:0005172,2.46e-10,54;UBERON:0005173,2.46e-10,54;UBERON:0002530,1.66e-09,59;UBERON:0002417,2.35e-09,60;UBERON:0000916,2.35e-09,60;UBERON:0005911,5.63e-07,82 | |||
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|short_description=p8@ECHDC2 | |short_description=p8@ECHDC2 | ||
}} | }} |
Latest revision as of 13:19, 18 September 2015
Short description: | p8@ECHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ECHDC2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 16bp_to_ENST00000543419_5end |
EntrezGene: | ECHDC2 |
HGNC: | 23408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.98e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.54e-28 | 19 |
digestive gland | 3.54e-28 | 19 |
liver bud | 3.54e-28 | 19 |
hepatic diverticulum | 1.93e-24 | 22 |
liver primordium | 1.93e-24 | 22 |
digestive tract diverticulum | 2.07e-23 | 23 |
epithelial sac | 1.35e-21 | 25 |
epithelium of foregut-midgut junction | 1.35e-21 | 25 |
anatomical boundary | 1.35e-21 | 25 |
hepatobiliary system | 1.35e-21 | 25 |
foregut-midgut junction | 1.35e-21 | 25 |
septum transversum | 1.35e-21 | 25 |
sac | 8.56e-21 | 26 |
exocrine gland | 1.49e-17 | 31 |
exocrine system | 1.49e-17 | 31 |
endocrine gland | 1.27e-15 | 35 |
endocrine system | 2.74e-12 | 45 |
gut epithelium | 2.46e-10 | 54 |
abdomen element | 2.46e-10 | 54 |
abdominal segment element | 2.46e-10 | 54 |
gland | 1.66e-09 | 59 |
abdominal segment of trunk | 2.35e-09 | 60 |
abdomen | 2.35e-09 | 60 |
endo-epithelium | 5.63e-07 | 82 |