FFCP PHASE1:Hg19::chr1:240448587..240448603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:240448587..240448603,+ | |||
|coexpression_cluster_id=C3954 | |coexpression_cluster_id=C3954 | ||
|description=CAGE_peak_at_chr1:240448587..240448603,+ | |description=CAGE_peak_at_chr1:240448587..240448603,+ | ||
|id=chr1:240448587..240448603,+ | |id=chr1:240448587..240448603,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.63e-34!23;CL:0000057!2.64e-25!75;CL:0002334!1.09e-17!12;CL:0000055!4.53e-15!180;CL:0002570!7.82e-13!8;CL:0002551!1.31e-08!6;CL:0002580!1.73e-08!3;CL:0002579!1.09e-07!3;CL:0000219!2.40e-07!390;CL:0000134!2.90e-07!358;CL:0002320!7.30e-07!365;CL:0000136!8.48e-07!15 | |ontology_enrichment_celltype=CL:0002620!2.63e-34!23;CL:0000057!2.64e-25!75;CL:0002334!1.09e-17!12;CL:0000055!4.53e-15!180;CL:0002570!7.82e-13!8;CL:0002551!1.31e-08!6;CL:0002580!1.73e-08!3;CL:0002579!1.09e-07!3;CL:0000219!2.40e-07!390;CL:0000134!2.90e-07!358;CL:0002320!7.30e-07!365;CL:0000136!8.48e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.70e-33;23!CL:0002580;3.97e-19;3!CL:0002617;4.83e-13;2!CL:0002334;2.92e-12;12!CL:0000057;1.90e-09;73!CL:0002573;3.54e-09;2!CL:0000515;9.81e-09;3!CL:0002579;1.56e-08;3!CL:0000136;2.33e-07;13!CL:0002616;7.29e-07;1!CL:0002570;9.01e-07;8!CL:0000056;9.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.07e-33,23;CL:0000057,9.76e-21,76;CL:0002580,3.98e-19,3;CL:0002617,4.98e-13,2;CL:0002334,2.79e-12,12;CL:0000136,1.48e-09,15;CL:0002573,3.54e-09,2;CL:0002579,1.44e-08,3;CL:0000219,1.73e-07,386;CL:0002616,5.14e-07,1;CL:0002570,9.79e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000515;9.47e-07;4 | |||
|ontology_enrichment_disease=DOID:17!8.11e-12!5;DOID:450!8.11e-12!5;DOID:66!8.11e-12!5;DOID:423!8.11e-12!5;DOID:0080000!8.11e-12!5;DOID:11722!8.11e-12!5 | |ontology_enrichment_disease=DOID:17!8.11e-12!5;DOID:450!8.11e-12!5;DOID:66!8.11e-12!5;DOID:423!8.11e-12!5;DOID:0080000!8.11e-12!5;DOID:11722!8.11e-12!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.92e-11;5!DOID:450;4.92e-11;5!DOID:66;4.92e-11;5!DOID:423;4.92e-11;5!DOID:0080000;4.92e-11;5!DOID:11722;4.92e-11;5!DOID:3369;1.97e-07;1!DOID:4235;7.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.58e-11,5;DOID:450,6.58e-11,5;DOID:66,6.58e-11,5;DOID:423,6.58e-11,5;DOID:0080000,6.58e-11,5;DOID:11722,6.58e-11,5;DOID:3369,1.98e-07,1;DOID:4235,7.29e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.49e-24!45;UBERON:0002416!3.49e-24!45;UBERON:0002097!4.46e-21!40;UBERON:0001013!5.39e-14!14;UBERON:0003102!1.85e-10!95;UBERON:0002384!2.89e-07!375 | |ontology_enrichment_uberon=UBERON:0002199!3.49e-24!45;UBERON:0002416!3.49e-24!45;UBERON:0002097!4.46e-21!40;UBERON:0001013!5.39e-14!14;UBERON:0003102!1.85e-10!95;UBERON:0002384!2.89e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.31e-15;10!UBERON:0002097;5.71e-14;41!UBERON:0001443;1.07e-13;11!UBERON:0002199;2.02e-12;46!UBERON:0002416;2.02e-12;46!UBERON:0001013;7.81e-10;14!UBERON:0003102;6.20e-09;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.13e-18,46;UBERON:0002416,2.13e-18,46;UBERON:0002097,1.02e-17,41;UBERON:0000310,4.38e-15,10;UBERON:0001443,1.08e-13,11;UBERON:0001013,7.24e-10,14;UBERON:0003102,3.47e-07,99 | |||
|phase1_expression=4.90531624030503,3.21150785836475,0.563817616383885,0,0,1.74467704820074,0,2.52687949370732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49728061464256,0,3.88566569434683,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,1.07633781413317,0.85422955527427,4.23863802319124,0.900273288253207,2.16410311400722,0.257640540045629,0.930584281657949,2.53164498361899,1.75386609290158,3.5340728394176,2.02509777013059,0.323292113637624,1.42003837006646,1.10827308050404,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,2.46128221334885,0.205476322550383,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,9.6762045049323,13.3511916760614,7.85848264412606,1.28139149255701,2.55853624533352,0.64341568457443,0,0.771048469013278,0.355123450626254,0.98552587216571,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52542140314453,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,1.04478362020812,0.233713309847224,0.554805861502613,0,0,0,0,0.302461847526478,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,1.71697852591396,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75656805406184,11.333382832968,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4669009767735,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=4.90531624030503,3.21150785836475,0.563817616383885,0,0,1.74467704820074,0,2.52687949370732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49728061464256,0,3.88566569434683,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,1.07633781413317,0.85422955527427,4.23863802319124,0.900273288253207,2.16410311400722,0.257640540045629,0.930584281657949,2.53164498361899,1.75386609290158,3.5340728394176,2.02509777013059,0.323292113637624,1.42003837006646,1.10827308050404,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,2.46128221334885,0.205476322550383,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,9.6762045049323,13.3511916760614,7.85848264412606,1.28139149255701,2.55853624533352,0.64341568457443,0,0.771048469013278,0.355123450626254,0.98552587216571,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52542140314453,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,1.04478362020812,0.233713309847224,0.554805861502613,0,0,0,0,0.302461847526478,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,1.71697852591396,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75656805406184,11.333382832968,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4669009767735,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:240448587..240448603,+ | |short_description=p@chr1:240448587..240448603,+ | ||
}} | }} |
Latest revision as of 05:39, 28 July 2015
Short description: | p@chr1:240448587..240448603, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:240448587..240448603, + |
Coexpression cluster: | C3954_Preadipocyte_schwannoma_Adipocyte_Ewing_Fibroblast_Myoblast_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.07e-33 | 23 |
fibroblast | 9.76e-21 | 76 |
preadipocyte of the breast | 3.98e-19 | 3 |
adipocyte of breast | 4.98e-13 | 2 |
preadipocyte | 2.79e-12 | 12 |
fat cell | 1.48e-09 | 15 |
Schwann cell | 3.54e-09 | 2 |
omentum preadipocyte | 1.44e-08 | 3 |
motile cell | 1.73e-07 | 386 |
perirenal adipocyte cell | 5.14e-07 | 1 |
mesenchymal stem cell of adipose | 9.79e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
integument | 2.13e-18 | 46 |
integumental system | 2.13e-18 | 46 |
skin of body | 1.02e-17 | 41 |
breast | 4.38e-15 | 10 |
chest | 1.08e-13 | 11 |
adipose tissue | 7.24e-10 | 14 |
surface structure | 3.47e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.58e-11 | 5 |
myotonic disease | 6.58e-11 | 5 |
muscle tissue disease | 6.58e-11 | 5 |
myopathy | 6.58e-11 | 5 |
muscular disease | 6.58e-11 | 5 |
myotonic dystrophy | 6.58e-11 | 5 |
peripheral primitive neuroectodermal tumor | 1.98e-07 | 1 |
spindle cell sarcoma | 7.29e-07 | 1 |