FFCP PHASE1:Hg19::chr1:222159603..222159607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:222159603..222159607,+ | |||
|coexpression_cluster_id=C367 | |coexpression_cluster_id=C367 | ||
|description=CAGE_peak_at_chr1:222159603..222159607,+ | |description=CAGE_peak_at_chr1:222159603..222159607,+ | ||
|id=chr1:222159603..222159607,+ | |id=chr1:222159603..222159607,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.25e-12!8;CL:0000540!1.03e-07!6;CL:0000031!1.03e-07!6;CL:0000404!1.03e-07!6 | |ontology_enrichment_celltype=CL:0000047!3.25e-12!8;CL:0000540!1.03e-07!6;CL:0000031!1.03e-07!6;CL:0000404!1.03e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1001319;5.72e-18;1!CL:1000600;5.72e-18;1!CL:0000039;1.90e-10;7!CL:0000586;1.90e-10;7!CL:0000047;1.64e-09;2!CL:0000322;6.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,6.23e-18,1;CL:1000600,6.23e-18,1;CL:0000039,2.14e-10,7;CL:0000586,2.14e-10,7;CL:0000322,6.14e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.40e-07;10!UBERON:0005564;1.40e-07;10 | |||
|ontology_enrichment_disease=DOID:305!5.37e-07!106 | |ontology_enrichment_disease=DOID:305!5.37e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4929;7.98e-10;2!DOID:3910;8.69e-10;2!DOID:4468;1.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.13e-12,106;DOID:4929,7.98e-10,2;DOID:3910,8.69e-10,2;DOID:4468,1.03e-09,2;DOID:0050687,1.04e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002394!4.49e-07!4;UBERON:0003928!4.49e-07!4 | |ontology_enrichment_uberon=UBERON:0002394!4.49e-07!4;UBERON:0003928!4.49e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.66e-18;1!UBERON:0003703;2.66e-18;1!UBERON:0001174;2.66e-18;1!UBERON:0004914;2.66e-18;1!UBERON:0000997;5.72e-18;1!UBERON:0004645;5.72e-18;1!UBERON:0005056;5.72e-18;1!UBERON:0004176;5.72e-18;1!UBERON:0001256;5.72e-18;1!UBERON:0001259;5.72e-18;1!UBERON:0004903;8.69e-10;2!UBERON:0002173;8.69e-10;2!UBERON:0002186;8.69e-10;2!UBERON:0001255;1.17e-09;2!UBERON:0001556;1.17e-09;2!UBERON:0000473;2.95e-09;8!UBERON:0000058;1.02e-07;10!UBERON:0003135;5.72e-07;11!UBERON:0002114;5.80e-07;2!UBERON:0004821;6.14e-07;3!UBERON:0007499;6.14e-07;3!UBERON:0003215;6.14e-07;3!UBERON:0010368;6.14e-07;3!UBERON:0009911;6.14e-07;3!UBERON:0002299;6.14e-07;3!UBERON:0006524;6.14e-07;3!UBERON:0008874;6.14e-07;3!UBERON:0002169;6.14e-07;3!UBERON:0004894;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.66e-18,1;UBERON:0003703,2.66e-18,1;UBERON:0001174,2.66e-18,1;UBERON:0004914,2.66e-18,1;UBERON:0000997,5.26e-18,1;UBERON:0005056,5.26e-18,1;UBERON:0004645,6.23e-18,1;UBERON:0001256,6.23e-18,1;UBERON:0001259,6.23e-18,1;UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0001255,1.22e-09,2;UBERON:0001556,1.22e-09,2;UBERON:0000473,3.27e-09,8;UBERON:0004176,2.21e-07,22;UBERON:0002114,5.80e-07,2;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3;UBERON:0003135,6.16e-07,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,6.61059490761192,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4278889713421,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84177952501695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0.198916222116275,0,0,0,0,0,13.0113355871,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0.111855431797792,0,0,0,0,1.1598144313382,0,0,0,0,0.22589216407792,0.329821550236287,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,1.78553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01988829741982,5.07713070004565,0.551369397209069,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,2.76771113277313,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:222159603..222159607,+ | |short_description=p@chr1:222159603..222159607,+ | ||
}} | }} |
Latest revision as of 04:13, 28 July 2015
Short description: | p@chr1:222159603..222159607, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:222159603..222159607, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 6.23e-18 | 1 |
lower urinary tract cell | 6.23e-18 | 1 |
germ line cell | 2.14e-10 | 7 |
germ cell | 2.14e-10 | 7 |
pneumocyte | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.66e-18 | 1 |
extrahepatic bile duct | 2.66e-18 | 1 |
common bile duct | 2.66e-18 | 1 |
duodenal papilla | 2.66e-18 | 1 |
mammalian vulva | 5.26e-18 | 1 |
external female genitalia | 5.26e-18 | 1 |
urinary bladder urothelium | 6.23e-18 | 1 |
wall of urinary bladder | 6.23e-18 | 1 |
mucosa of urinary bladder | 6.23e-18 | 1 |
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
urinary bladder | 1.22e-09 | 2 |
lower urinary tract | 1.22e-09 | 2 |
testis | 3.27e-09 | 8 |
external genitalia | 2.21e-07 | 22 |
duodenum | 5.80e-07 | 2 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
male reproductive organ | 6.16e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.13e-12 | 106 |
tubular adenocarcinoma | 7.98e-10 | 2 |
lung adenocarcinoma | 8.69e-10 | 2 |
clear cell adenocarcinoma | 1.03e-09 | 2 |
cell type cancer | 1.04e-08 | 143 |