FFCP PHASE1:Hg19::chr19:10394909..10394927,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:10394909..10394927,+
|short_description=p6@ICAM1
|description=CAGE_peak_6_at_ICAM1_5end
|association_with_transcript=69bp_to_M55038_5end
|EntrezGene=3383...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3383 | |EntrezGene=3383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5344 | |HGNC=5344 | ||
|TSSclassifier=strong | |||
|UniProt=Q15463 | |UniProt=Q15463 | ||
|association_with_transcript=69bp_to_M55038_5end | |||
|cluster_id=chr19:10394909..10394927,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_6_at_ICAM1_5end | |||
|id=chr19:10394909..10394927,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.24e-24!42;CL:0000860!1.56e-22!45;CL:0002009!2.63e-20!65;CL:0000766!2.74e-19!76;CL:0002194!5.06e-19!63;CL:0000576!5.06e-19!63;CL:0000040!5.06e-19!63;CL:0000559!5.06e-19!63;CL:0000557!4.70e-18!71;CL:0000839!2.29e-16!70;CL:0000763!6.67e-12!112;CL:0000049!6.67e-12!112;CL:0000738!7.27e-11!140;CL:0002087!2.17e-10!119;CL:0002031!1.70e-09!124;CL:0000988!1.35e-08!182;CL:0000144!4.39e-08!625;CL:0002032!9.84e-08!165;CL:0000837!9.84e-08!165;CL:0000048!1.42e-07!430;CL:0000037!1.76e-07!172;CL:0000566!1.76e-07!172;CL:0002371!2.76e-07!591;CL:0000723!5.50e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.97e-61;33!CL:0002057;5.97e-61;33!CL:0000473;3.27e-45;39!CL:0000234;3.27e-45;39!CL:0000576;1.03e-28;48!CL:0000766;3.12e-21;69!CL:0000763;4.95e-11;100!CL:0000081;9.47e-11;11!CL:0002593;1.33e-08;2!CL:0000771;5.49e-08;2!CL:0002087;2.11e-07;104!CL:0000094;2.65e-07;8!CL:0002595;5.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.41e-56,42;CL:0002057,6.41e-56,42;CL:0000473,5.63e-52,48;CL:0000234,5.63e-52,48;CL:0000766,1.26e-42,72;CL:0002194,4.53e-40,59;CL:0000576,4.53e-40,59;CL:0000040,4.53e-40,59;CL:0000559,4.53e-40,59;CL:0002009,1.55e-38,61;CL:0000839,4.23e-35,66;CL:0000557,1.79e-34,67;CL:0000763,8.87e-26,108;CL:0000049,8.87e-26,108;CL:0000738,7.88e-19,136;CL:0002087,3.57e-17,115;CL:0002031,3.60e-16,120;CL:0000988,1.05e-14,177;CL:0002032,1.11e-14,161;CL:0000837,1.11e-14,161;CL:0000037,9.59e-14,168;CL:0000081,9.84e-11,11;CL:0002593,1.38e-08,2;CL:0000134,2.55e-08,354;CL:0000771,4.69e-08,2;CL:0002320,5.68e-08,361;CL:0000048,1.49e-07,427;CL:0000094,2.24e-07,8;CL:0000723,2.65e-07,433;CL:0002595,4.70e-07,5;CL:0000034,5.56e-07,441;CL:0000219,9.37e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-41;42!CL:0000049;1.71e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.01e-17!112;UBERON:0002405!1.74e-16!115;UBERON:0002371!8.99e-16!80;UBERON:0002390!7.65e-15!102;UBERON:0003061!7.65e-15!102;UBERON:0001474!1.81e-13!86;UBERON:0003081!2.03e-12!216;UBERON:0004765!1.84e-11!101;UBERON:0001434!1.84e-11!101;UBERON:0002204!1.42e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.33e-08;2!UBERON:0003834;5.15e-07;5!UBERON:0001533;5.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-29,76;UBERON:0001474,6.73e-27,82;UBERON:0002405,9.08e-25,93;UBERON:0004765,6.93e-24,90;UBERON:0002390,4.51e-23,98;UBERON:0003061,4.51e-23,98;UBERON:0002193,6.45e-22,108;UBERON:0001434,8.50e-21,100;UBERON:0002204,6.45e-15,167;UBERON:0003081,1.08e-13,203;UBERON:0002456,1.38e-08,2;UBERON:0000926,2.37e-08,315;UBERON:0004120,2.37e-08,315;UBERON:0006603,2.37e-08,315;UBERON:0002384,1.69e-07,371;UBERON:0003834,4.70e-07,5;UBERON:0001533,4.70e-07,5 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,2.79120467188971,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0,0.764134057479513,0.57470412614962,0.0787107813136792,0,0,0.464448369948228,0,0,0,0.0774672005803016,0.426507697462265,0,0,3.60980005446255,0.434021741431704,0.223915474239924,0,0,0.290796477559129,0.377875943688809,0.485168122375632,4.18372266430232,2.46700732813095,1.85823822537062,11.507695692886,6.91633907628572,5.43909128743746,4.48169384957604,3.87290810150296,1.35426486594342,3.38836211176688,1.91034305040492,0.674170453335254,7.03992952453076,3.53021929783703,7.03270838378945,3.62836430205388,2.79249120670285,4.26224750532694,10.1573233520004,3.97169657283798,6.85104473895132,4.52247597462138,5.21482918420201,1.95469960234605,4.84319602106695,3.31449872388808,2.53169909952708,0,0.212604299965044,0,0.112328631146495,0.600707571366025,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0.573673241497627,0,0,0,1.48000529050296,0,0.808264032418128,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,2.15585442544872,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0.10366105501537,0,0,3.12899064659632,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0.283550194484773,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,2.19940580600526,0,0,4.21667878966063,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0.431255149719035,0,0,0,0,0,0,7.49007023947182,0,2.90090859405225,0.12269149171914,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0.647142602455851,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0.321707842287215,1.48418066444991,0.462629081407967,0.177561725313127,0,1.03850885836724,0.232420756919918,0,0.601519410909855,0,0,0,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0.42793898803392,0,2.35484592059769,0,0,0,0,0,0.842516912477962,0.48763373908959,5.11798328225697,5.28250733783777,0,0.282810863907425,0,0,0.66343897524122,1.75380354101505,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.188287601553558,0,1.68471475667626,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0.369254416383208,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,1.02547850262301,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,1.89898258075224,0.163232808159148,0,0,0,0,0,1.18608451472249,0.617819694732514,0.730953646538188,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.480952921509202,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,1.25763444079733,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0.889811221596536,0.457680136793847,0,0,0,0.955780602982214,1.34940933649081,0,0.414706207840855,0.797525143673985,2.60872530905867,0.450772826991655,4.56966254602554,0.813741466409323,0.181848659202559,0.214821114084977,0,3.98095888698616,0,0,0,0,0,0.643324774124777,0.782982875895635,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| ||
|short_description=p6@ICAM1 | |||
}} | }} |
Latest revision as of 00:25, 25 September 2015
Short description: | p6@ICAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ICAM1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 69bp_to_M55038_5end |
EntrezGene: | ICAM1 |
HGNC: | 5344 |
UniProt: | Q15463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-29 | 76 |
bone element | 6.73e-27 | 82 |
immune system | 9.08e-25 | 93 |
skeletal element | 6.93e-24 | 90 |
hematopoietic system | 4.51e-23 | 98 |
blood island | 4.51e-23 | 98 |
hemolymphoid system | 6.45e-22 | 108 |
skeletal system | 8.50e-21 | 100 |
musculoskeletal system | 6.45e-15 | 167 |
lateral plate mesoderm | 1.08e-13 | 203 |
internal thoracic artery | 1.38e-08 | 2 |
mesoderm | 2.37e-08 | 315 |
mesoderm-derived structure | 2.37e-08 | 315 |
presumptive mesoderm | 2.37e-08 | 315 |
connective tissue | 1.69e-07 | 371 |
thoracic segment blood vessel | 4.70e-07 | 5 |
subclavian artery | 4.70e-07 | 5 |