FFCP PHASE1:Hg19::chr1:183532611..183532622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183532611..183532622,- | |||
|coexpression_cluster_id=C329 | |coexpression_cluster_id=C329 | ||
|description=CAGE_peak_at_chr1:183532611..183532622,- | |description=CAGE_peak_at_chr1:183532611..183532622,- | ||
|id=chr1:183532611..183532622,- | |id=chr1:183532611..183532622,- | ||
|ontology_enrichment_celltype=CL:0002057!2.06e-83!42;CL:0000860!4.31e-77!45;CL:0000766!1.62e-68!76;CL:0002194!4.33e-67!63;CL:0000576!4.33e-67!63;CL:0000040!4.33e-67!63;CL:0000559!4.33e-67!63;CL:0002009!1.12e-64!65;CL:0000839!3.06e-59!70;CL:0000557!3.04e-58!71;CL:0000763!1.12e-50!112;CL:0000049!1.12e-50!112;CL:0000738!4.71e-45!140;CL:0002087!1.66e-44!119;CL:0000037!3.53e-40!172;CL:0000566!3.53e-40!172;CL:0002032!4.30e-39!165;CL:0000837!4.30e-39!165;CL:0002031!2.40e-38!124;CL:0000988!3.87e-37!182;CL:0002393!6.97e-13!9;CL:0002397!6.97e-13!9;CL:0000134!3.02e-12!358;CL:0002320!9.90e-12!365;CL:0000219!6.37e-10!390;CL:0000775!6.63e-09!3;CL:0000094!6.14e-08!8;CL:0000048!8.62e-08!430;CL:0000723!1.72e-07!436;CL:0000063!3.93e-07!578;CL:0000034!4.16e-07!444 | |ontology_enrichment_celltype=CL:0002057!2.06e-83!42;CL:0000860!4.31e-77!45;CL:0000766!1.62e-68!76;CL:0002194!4.33e-67!63;CL:0000576!4.33e-67!63;CL:0000040!4.33e-67!63;CL:0000559!4.33e-67!63;CL:0002009!1.12e-64!65;CL:0000839!3.06e-59!70;CL:0000557!3.04e-58!71;CL:0000763!1.12e-50!112;CL:0000049!1.12e-50!112;CL:0000738!4.71e-45!140;CL:0002087!1.66e-44!119;CL:0000037!3.53e-40!172;CL:0000566!3.53e-40!172;CL:0002032!4.30e-39!165;CL:0000837!4.30e-39!165;CL:0002031!2.40e-38!124;CL:0000988!3.87e-37!182;CL:0002393!6.97e-13!9;CL:0002397!6.97e-13!9;CL:0000134!3.02e-12!358;CL:0002320!9.90e-12!365;CL:0000219!6.37e-10!390;CL:0000775!6.63e-09!3;CL:0000094!6.14e-08!8;CL:0000048!8.62e-08!430;CL:0000723!1.72e-07!436;CL:0000063!3.93e-07!578;CL:0000034!4.16e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-61;33!CL:0002057;1.27e-61;33!CL:0000473;5.31e-48;39!CL:0000234;5.31e-48;39!CL:0000576;7.03e-32;48!CL:0000766;7.43e-20;69!CL:0000763;5.28e-14;100!CL:0002087;5.69e-11;104!CL:0000738;3.33e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.17e-63,42;CL:0002057,1.17e-63,42;CL:0000473,2.33e-55,48;CL:0000234,2.33e-55,48;CL:0002194,9.93e-44,59;CL:0000576,9.93e-44,59;CL:0000040,9.93e-44,59;CL:0000559,9.93e-44,59;CL:0002009,3.15e-42,61;CL:0000766,8.03e-40,72;CL:0000839,7.25e-39,66;CL:0000557,2.98e-38,67;CL:0000763,1.10e-25,108;CL:0000049,1.10e-25,108;CL:0002087,7.17e-24,115;CL:0000738,3.45e-22,136;CL:0002031,3.19e-20,120;CL:0000037,2.20e-17,168;CL:0000988,2.42e-16,177;CL:0002032,2.84e-16,161;CL:0000837,2.84e-16,161 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-55;42!CL:0000049;4.29e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.21e-53!80;UBERON:0002390!6.91e-53!102;UBERON:0003061!6.91e-53!102;UBERON:0001474!1.76e-48!86;UBERON:0002193!5.64e-47!112;UBERON:0004765!1.75e-41!101;UBERON:0001434!1.75e-41!101;UBERON:0002405!3.13e-33!115;UBERON:0002204!2.72e-20!167;UBERON:0003081!6.29e-20!216;UBERON:0002384!4.99e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!5.21e-53!80;UBERON:0002390!6.91e-53!102;UBERON:0003061!6.91e-53!102;UBERON:0001474!1.76e-48!86;UBERON:0002193!5.64e-47!112;UBERON:0004765!1.75e-41!101;UBERON:0001434!1.75e-41!101;UBERON:0002405!3.13e-33!115;UBERON:0002204!2.72e-20!167;UBERON:0003081!6.29e-20!216;UBERON:0002384!4.99e-11!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-09;15!UBERON:0000179;1.73e-09;15!UBERON:0000463;1.73e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.13e-39,98;UBERON:0003061,4.13e-39,98;UBERON:0002193,3.09e-35,108;UBERON:0002371,1.90e-33,76;UBERON:0001474,8.02e-31,82;UBERON:0004765,7.38e-28,90;UBERON:0002405,7.08e-27,93;UBERON:0001434,8.23e-25,100;UBERON:0003081,2.56e-17,203;UBERON:0002204,1.01e-13,167;UBERON:0000926,5.74e-10,315;UBERON:0004120,5.74e-10,315;UBERON:0006603,5.74e-10,315;UBERON:0000178,1.55e-09,15;UBERON:0000179,1.55e-09,15;UBERON:0000463,1.55e-09,15 | |||
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|short_description=p@chr1:183532611..183532622,- | |short_description=p@chr1:183532611..183532622,- | ||
}} | }} |
Latest revision as of 01:14, 28 July 2015
Short description: | p@chr1:183532611..183532622, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183532611..183532622, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.17e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-63 | 42 |
defensive cell | 2.33e-55 | 48 |
phagocyte | 2.33e-55 | 48 |
monopoietic cell | 9.93e-44 | 59 |
monocyte | 9.93e-44 | 59 |
monoblast | 9.93e-44 | 59 |
promonocyte | 9.93e-44 | 59 |
macrophage dendritic cell progenitor | 3.15e-42 | 61 |
myeloid leukocyte | 8.03e-40 | 72 |
myeloid lineage restricted progenitor cell | 7.25e-39 | 66 |
granulocyte monocyte progenitor cell | 2.98e-38 | 67 |
myeloid cell | 1.10e-25 | 108 |
common myeloid progenitor | 1.10e-25 | 108 |
nongranular leukocyte | 7.17e-24 | 115 |
leukocyte | 3.45e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 3.19e-20 | 120 |
hematopoietic stem cell | 2.20e-17 | 168 |
hematopoietic cell | 2.42e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.84e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.84e-16 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.13e-39 | 98 |
blood island | 4.13e-39 | 98 |
hemolymphoid system | 3.09e-35 | 108 |
bone marrow | 1.90e-33 | 76 |
bone element | 8.02e-31 | 82 |
skeletal element | 7.38e-28 | 90 |
immune system | 7.08e-27 | 93 |
skeletal system | 8.23e-25 | 100 |
lateral plate mesoderm | 2.56e-17 | 203 |
musculoskeletal system | 1.01e-13 | 167 |
mesoderm | 5.74e-10 | 315 |
mesoderm-derived structure | 5.74e-10 | 315 |
presumptive mesoderm | 5.74e-10 | 315 |
blood | 1.55e-09 | 15 |
haemolymphatic fluid | 1.55e-09 | 15 |
organism substance | 1.55e-09 | 15 |