FFCP PHASE1:Hg19::chr1:17945095..17945126,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55160 | |EntrezGene=55160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25540 | |HGNC=25540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_BC111058_5end | |association_with_transcript=-26bp_to_BC111058_5end | ||
|cluster_id=chr1:17945095..17945126,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_7_at_ARHGEF10L_5end | |description=CAGE_peak_7_at_ARHGEF10L_5end | ||
|id=chr1:17945095..17945126,+ | |id=chr1:17945095..17945126,+ | ||
|ontology_enrichment_celltype=CL:0002194!3.12e-68!63;CL:0000576!3.12e-68!63;CL:0000040!3.12e-68!63;CL:0000559!3.12e-68!63;CL:0002009!1.46e-65!65;CL:0002057!4.13e-62!42;CL:0000766!3.01e-60!76;CL:0000839!1.50e-59!70;CL:0000557!1.90e-58!71;CL:0000860!6.23e-57!45;CL:0002087!6.68e-37!119;CL:0000763!1.15e-34!112;CL:0000049!1.15e-34!112;CL:0000738!3.39e-32!140;CL:0002031!2.41e-30!124;CL:0000037!1.93e-22!172;CL:0000566!1.93e-22!172;CL:0002032!4.27e-21!165;CL:0000837!4.27e-21!165;CL:0000988!3.94e-20!182;CL:0002393!2.31e-10!9;CL:0002397!2.31e-10!9 | |ontology_enrichment_celltype=CL:0002194!3.12e-68!63;CL:0000576!3.12e-68!63;CL:0000040!3.12e-68!63;CL:0000559!3.12e-68!63;CL:0002009!1.46e-65!65;CL:0002057!4.13e-62!42;CL:0000766!3.01e-60!76;CL:0000839!1.50e-59!70;CL:0000557!1.90e-58!71;CL:0000860!6.23e-57!45;CL:0002087!6.68e-37!119;CL:0000763!1.15e-34!112;CL:0000049!1.15e-34!112;CL:0000738!3.39e-32!140;CL:0002031!2.41e-30!124;CL:0000037!1.93e-22!172;CL:0000566!1.93e-22!172;CL:0002032!4.27e-21!165;CL:0000837!4.27e-21!165;CL:0000988!3.94e-20!182;CL:0002393!2.31e-10!9;CL:0002397!2.31e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-107;33!CL:0002057;1.13e-107;33!CL:0000473;6.53e-95;39!CL:0000234;6.53e-95;39!CL:0000576;9.14e-82;48!CL:0000766;1.18e-52;69!CL:0000763;1.28e-24;100!CL:0002087;1.01e-20;104!CL:0000738;5.30e-15;136!CL:0002393;2.37e-14;6!CL:0002397;2.37e-14;6!CL:0002619;4.20e-11;3!CL:0000226;1.07e-10;3!CL:0000842;1.07e-10;3!CL:0000235;1.39e-09;6!CL:0000988;3.71e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.27e-135,48;CL:0000234,5.27e-135,48;CL:0000860,1.14e-127,42;CL:0002057,1.14e-127,42;CL:0002194,7.82e-122,59;CL:0000576,7.82e-122,59;CL:0000040,7.82e-122,59;CL:0000559,7.82e-122,59;CL:0002009,1.43e-117,61;CL:0000839,4.95e-108,66;CL:0000557,2.72e-106,67;CL:0000766,1.05e-102,72;CL:0002087,1.73e-66,115;CL:0000763,2.39e-65,108;CL:0000049,2.39e-65,108;CL:0000738,3.80e-57,136;CL:0002031,3.31e-55,120;CL:0000037,2.69e-44,168;CL:0000988,1.63e-41,177;CL:0002032,1.55e-40,161;CL:0000837,1.55e-40,161;CL:0000134,2.13e-15,354;CL:0002320,6.87e-15,361;CL:0002393,3.02e-13,9;CL:0002397,3.02e-13,9;CL:0000219,4.28e-13,386;CL:0002619,4.13e-11,3;CL:0000034,6.01e-11,441;CL:0000048,6.68e-11,427;CL:0000226,1.18e-10,3;CL:0000842,1.18e-10,3;CL:0000723,1.34e-10,433;CL:0000235,1.20e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-92;42!CL:0000049;3.72e-21;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-55!102;UBERON:0003061!1.13e-55!102;UBERON:0002193!2.71e-50!112;UBERON:0002371!8.84e-50!80;UBERON:0001474!5.17e-45!86;UBERON:0004765!1.34e-35!101;UBERON:0001434!1.34e-35!101;UBERON:0002405!8.99e-34!115;UBERON:0003081!4.18e-26!216;UBERON:0002204!3.65e-23!167;UBERON:0007023!4.19e-12!115;UBERON:0000926!1.81e-09!448;UBERON:0004120!1.81e-09!448;UBERON:0006603!1.81e-09!448;UBERON:0000178!4.94e-07!15;UBERON:0000179!4.94e-07!15;UBERON:0000463!4.94e-07!15;UBERON:0000467!1.00e-06!625 | |ontology_enrichment_uberon=UBERON:0002390!1.13e-55!102;UBERON:0003061!1.13e-55!102;UBERON:0002193!2.71e-50!112;UBERON:0002371!8.84e-50!80;UBERON:0001474!5.17e-45!86;UBERON:0004765!1.34e-35!101;UBERON:0001434!1.34e-35!101;UBERON:0002405!8.99e-34!115;UBERON:0003081!4.18e-26!216;UBERON:0002204!3.65e-23!167;UBERON:0007023!4.19e-12!115;UBERON:0000926!1.81e-09!448;UBERON:0004120!1.81e-09!448;UBERON:0006603!1.81e-09!448;UBERON:0000178!4.94e-07!15;UBERON:0000179!4.94e-07!15;UBERON:0000463!4.94e-07!15;UBERON:0000467!1.00e-06!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.58e-07;15!UBERON:0000179;1.58e-07;15!UBERON:0000463;1.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-92,76;UBERON:0002390,2.61e-90,98;UBERON:0003061,2.61e-90,98;UBERON:0001474,3.20e-85,82;UBERON:0002193,4.83e-81,108;UBERON:0004765,8.02e-77,90;UBERON:0002405,4.85e-74,93;UBERON:0001434,3.43e-68,100;UBERON:0003081,2.87e-38,203;UBERON:0002204,7.54e-37,167;UBERON:0000926,5.89e-22,315;UBERON:0004120,5.89e-22,315;UBERON:0006603,5.89e-22,315;UBERON:0002384,3.40e-14,371;UBERON:0000923,5.75e-08,560;UBERON:0010316,5.75e-08,560;UBERON:0005291,5.75e-08,560;UBERON:0006598,5.75e-08,560;UBERON:0010317,5.75e-08,560;UBERON:0002532,5.75e-08,560;UBERON:0002050,7.89e-08,564;UBERON:0000178,1.79e-07,15;UBERON:0000179,1.79e-07,15;UBERON:0000463,1.79e-07,15;UBERON:0005423,2.90e-07,581;UBERON:0000922,6.47e-07,592 | |||
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| ||
|short_description=p7@ARHGEF10L | |short_description=p7@ARHGEF10L | ||
}} | }} |
Latest revision as of 22:29, 18 September 2015
Short description: | p7@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARHGEF10L_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -26bp_to_BC111058_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-92 | 76 |
hematopoietic system | 2.61e-90 | 98 |
blood island | 2.61e-90 | 98 |
bone element | 3.20e-85 | 82 |
hemolymphoid system | 4.83e-81 | 108 |
skeletal element | 8.02e-77 | 90 |
immune system | 4.85e-74 | 93 |
skeletal system | 3.43e-68 | 100 |
lateral plate mesoderm | 2.87e-38 | 203 |
musculoskeletal system | 7.54e-37 | 167 |
mesoderm | 5.89e-22 | 315 |
mesoderm-derived structure | 5.89e-22 | 315 |
presumptive mesoderm | 5.89e-22 | 315 |
connective tissue | 3.40e-14 | 371 |
germ layer | 5.75e-08 | 560 |
germ layer / neural crest | 5.75e-08 | 560 |
embryonic tissue | 5.75e-08 | 560 |
presumptive structure | 5.75e-08 | 560 |
germ layer / neural crest derived structure | 5.75e-08 | 560 |
epiblast (generic) | 5.75e-08 | 560 |
embryonic structure | 7.89e-08 | 564 |
blood | 1.79e-07 | 15 |
haemolymphatic fluid | 1.79e-07 | 15 |
organism substance | 1.79e-07 | 15 |
developing anatomical structure | 2.90e-07 | 581 |
embryo | 6.47e-07 | 592 |