FFCP PHASE1:Hg19::chr1:153232160..153232165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4014 | |EntrezGene=4014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6663 | |HGNC=6663 | ||
|TSSclassifier=strong | |||
|UniProt=P23490 | |UniProt=P23490 | ||
|association_with_transcript=-10bp_to_ENST00000368742_5end | |association_with_transcript=-10bp_to_ENST00000368742_5end | ||
|cluster_id=chr1:153232160..153232165,+ | |||
|coexpression_cluster_id=C208 | |coexpression_cluster_id=C208 | ||
|description=CAGE_peak_1_at_LOR_5end | |description=CAGE_peak_1_at_LOR_5end | ||
|id=chr1:153232160..153232165,+ | |id=chr1:153232160..153232165,+ | ||
|ontology_enrichment_celltype=CL:0000622!1.74e-16!5;CL:0002623!6.00e-16!3;CL:0000154!9.35e-14!6;CL:0001014!1.53e-10!2;CL:0001016!1.53e-10!2;CL:0000362!4.37e-10!8;CL:0000312!1.89e-09!5;CL:0002159!3.32e-09!13;CL:0000150!3.43e-09!9;CL:0000240!6.05e-08!6;CL:0000311!6.05e-08!6;CL:0000079!6.05e-08!6;CL:0000237!6.05e-08!6;CL:0000036!6.05e-08!6;CL:0000357!6.05e-08!6;CL:0000114!6.05e-08!6 | |ontology_enrichment_celltype=CL:0000622!1.74e-16!5;CL:0002623!6.00e-16!3;CL:0000154!9.35e-14!6;CL:0001014!1.53e-10!2;CL:0001016!1.53e-10!2;CL:0000362!4.37e-10!8;CL:0000312!1.89e-09!5;CL:0002159!3.32e-09!13;CL:0000150!3.43e-09!9;CL:0000240!6.05e-08!6;CL:0000311!6.05e-08!6;CL:0000079!6.05e-08!6;CL:0000237!6.05e-08!6;CL:0000036!6.05e-08!6;CL:0000357!6.05e-08!6;CL:0000114!6.05e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.06e-29;5!CL:0002623;4.52e-28;3!CL:0000154;1.44e-24;6!CL:0000150;1.78e-16;9!CL:0000362;1.08e-09;9!CL:0000312;2.88e-08;5!CL:0000240;5.02e-07;6!CL:0000311;5.02e-07;6!CL:0000079;5.02e-07;6!CL:0000237;5.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.92e-29,5;CL:0002623,3.94e-28,3;CL:0000154,1.35e-24,6;CL:0000150,1.71e-16,9;CL:0000362,1.08e-09,9;CL:0000312,2.83e-08,5;CL:0000240,4.95e-07,6;CL:0000311,4.95e-07,6;CL:0000079,4.95e-07,6;CL:0000237,4.95e-07,6;CL:0000036,4.95e-07,6;CL:0000357,4.95e-07,6;CL:0000114,4.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.14e-11;1!UBERON:0000358;9.83e-11;1!CL:0000357;5.02e-07;6!CL:0000114;5.02e-07;6 | |||
|ontology_enrichment_disease=DOID:114!1.26e-10!2 | |ontology_enrichment_disease=DOID:114!1.26e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.37e-10;1!DOID:3149;1.37e-10;1!DOID:178;3.15e-10;1!DOID:326;3.15e-10;1!DOID:3978;3.15e-10;1!DOID:3394;3.15e-10;1!DOID:5844;3.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.43e-10,1;DOID:3149,1.43e-10,1;DOID:178,3.01e-10,1;DOID:326,3.01e-10,1;DOID:3978,3.01e-10,1;DOID:3394,3.01e-10,1;DOID:5844,3.01e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003408!1.76e-12!10;UBERON:0001042!2.23e-12!10;UBERON:0009145!2.23e-12!10;UBERON:0006562!3.16e-11!11;UBERON:0000078!1.50e-09!18;UBERON:0001003!9.67e-09!14;UBERON:0007376!9.67e-09!14;UBERON:0007383!9.67e-09!14;UBERON:0001044!3.40e-08!6;UBERON:0003293!3.40e-08!6;UBERON:0003294!3.40e-08!6;UBERON:0010047!3.40e-08!6;UBERON:0000167!3.40e-08!6;UBERON:0000166!4.30e-08!21;UBERON:0001723!9.10e-08!3;UBERON:0001033!9.10e-08!3;UBERON:0010056!9.10e-08!3;UBERON:0003102!3.43e-07!95 | |ontology_enrichment_uberon=UBERON:0003408!1.76e-12!10;UBERON:0001042!2.23e-12!10;UBERON:0009145!2.23e-12!10;UBERON:0006562!3.16e-11!11;UBERON:0000078!1.50e-09!18;UBERON:0001003!9.67e-09!14;UBERON:0007376!9.67e-09!14;UBERON:0007383!9.67e-09!14;UBERON:0001044!3.40e-08!6;UBERON:0003293!3.40e-08!6;UBERON:0003294!3.40e-08!6;UBERON:0010047!3.40e-08!6;UBERON:0000167!3.40e-08!6;UBERON:0000166!4.30e-08!21;UBERON:0001723!9.10e-08!3;UBERON:0001033!9.10e-08!3;UBERON:0010056!9.10e-08!3;UBERON:0003102!3.43e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.53e-19;2!UBERON:0005058;4.53e-19;2!UBERON:0009113;4.53e-19;2!UBERON:0001044;2.34e-14;6!UBERON:0003293;2.34e-14;6!UBERON:0003294;2.34e-14;6!UBERON:0010047;2.34e-14;6!UBERON:0003408;2.34e-14;6!UBERON:0000167;2.34e-14;6!UBERON:0001723;2.79e-13;3!UBERON:0001033;2.79e-13;3!UBERON:0000165;2.72e-11;28!UBERON:0007029;6.73e-11;1!UBERON:0000989;8.14e-11;1!UBERON:0008811;8.14e-11;1!UBERON:0000014;2.45e-10;4!UBERON:0005795;3.15e-10;1!UBERON:0002372;4.33e-10;1!UBERON:0002426;4.33e-10;1!UBERON:0003831;4.33e-10;1!UBERON:0003898;4.33e-10;1!UBERON:0004830;4.33e-10;1!UBERON:0001961;4.33e-10;1!UBERON:0001744;4.33e-10;1!UBERON:0003830;4.33e-10;1!UBERON:0005175;4.33e-10;1!UBERON:0001774;4.33e-10;1!UBERON:0001103;4.33e-10;1!UBERON:0001042;4.33e-10;1!UBERON:0001735;4.33e-10;1!UBERON:0001003;4.73e-10;15!UBERON:0007376;4.73e-10;15!UBERON:0004177;3.52e-08;5!UBERON:0005057;3.52e-08;5!UBERON:0000161;7.65e-08;19!UBERON:0000166;7.65e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.11e-22,10;UBERON:0001042,1.74e-22,10;UBERON:0009145,1.74e-22,10;UBERON:0006562,1.93e-20,11;UBERON:0000166,1.67e-14,22;UBERON:0001044,2.19e-14,6;UBERON:0003293,2.19e-14,6;UBERON:0003294,2.19e-14,6;UBERON:0010047,2.19e-14,6;UBERON:0000167,2.19e-14,6;UBERON:0001723,2.79e-13,3;UBERON:0001033,2.79e-13,3;UBERON:0010056,2.79e-13,3;UBERON:0001557,8.45e-12,19;UBERON:0000165,6.72e-11,29;UBERON:0000930,6.72e-11,29;UBERON:0007029,6.73e-11,1;UBERON:0000989,8.14e-11,1;UBERON:0008811,8.14e-11,1;UBERON:0006258,8.14e-11,1;UBERON:0005876,8.14e-11,1;UBERON:0004874,8.14e-11,1;UBERON:0000014,2.51e-10,4;UBERON:0002426,3.96e-10,1;UBERON:0003831,3.96e-10,1;UBERON:0003898,3.96e-10,1;UBERON:0004830,3.96e-10,1;UBERON:0003830,3.96e-10,1;UBERON:0005175,3.96e-10,1;UBERON:0001774,3.96e-10,1;UBERON:0001103,3.96e-10,1;UBERON:0010084,3.96e-10,1;UBERON:0002372,4.33e-10,1;UBERON:0001961,4.33e-10,1;UBERON:0001744,4.33e-10,1;UBERON:0001735,4.33e-10,1;UBERON:0001003,4.73e-10,15;UBERON:0007376,4.73e-10,15;UBERON:0007383,4.73e-10,15;UBERON:0002370,5.46e-10,4;UBERON:0005058,5.46e-10,4;UBERON:0009113,5.46e-10,4;UBERON:0003295,5.46e-10,4;UBERON:0005562,5.46e-10,4;UBERON:0003102,1.95e-09,99;UBERON:0000161,1.08e-08,36;UBERON:0001004,1.19e-08,74;UBERON:0000153,2.20e-08,62;UBERON:0007811,2.20e-08,62;UBERON:0008814,2.52e-08,18;UBERON:0003351,6.11e-07,6 | |||
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|short_description=p1@LOR | |short_description=p1@LOR | ||
}} | }} |
Latest revision as of 04:47, 17 September 2015
Short description: | p1@LOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOR_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -10bp_to_ENST00000368742_5end |
EntrezGene: | LOR |
HGNC: | 6663 |
UniProt: | P23490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.92e-29 | 5 |
acinar cell of salivary gland | 3.94e-28 | 3 |
protein secreting cell | 1.35e-24 | 6 |
glandular epithelial cell | 1.71e-16 | 9 |
epidermal cell | 1.08e-09 | 9 |
keratinocyte | 2.83e-08 | 5 |
stratified squamous epithelial cell | 4.95e-07 | 6 |
keratin accumulating cell | 4.95e-07 | 6 |
stratified epithelial cell | 4.95e-07 | 6 |
keratinizing barrier epithelial cell | 4.95e-07 | 6 |
epithelial fate stem cell | 4.95e-07 | 6 |
stratified epithelial stem cell | 4.95e-07 | 6 |
surface ectodermal cell | 4.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.43e-10 | 1 |
keratoacanthoma | 1.43e-10 | 1 |
vascular disease | 3.01e-10 | 1 |
ischemia | 3.01e-10 | 1 |
extrinsic cardiomyopathy | 3.01e-10 | 1 |
myocardial ischemia | 3.01e-10 | 1 |
myocardial infarction | 3.01e-10 | 1 |