FFCP PHASE1:Hg19::chr19:46001697..46001729,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147699 | |EntrezGene=147699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26845 | |HGNC=26845 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N819,E7ERC0 | |UniProt=Q8N819,E7ERC0 | ||
|association_with_transcript=-1bp_to_ENST00000396734,ENST00000451287,NM_001080401,uc002pce.2_5end | |association_with_transcript=-1bp_to_ENST00000396734,ENST00000451287,NM_001080401,uc002pce.2_5end | ||
|cluster_id=chr19:46001697..46001729,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_7_at_PPM1N_5end | |description=CAGE_peak_7_at_PPM1N_5end | ||
|id=chr19:46001697..46001729,+ | |id=chr19:46001697..46001729,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.50e-13!7;CL:0000586!1.50e-13!7;CL:0000625!1.57e-08!11 | |ontology_enrichment_celltype=CL:0000039!1.50e-13!7;CL:0000586!1.50e-13!7;CL:0000625!1.57e-08!11 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.18e-38;3 | |||
|ontology_enrichment_disease=DOID:3095!6.42e-09!22;DOID:2994!6.42e-09!22;DOID:0060060!5.78e-07!1;DOID:0060061!5.78e-07!1;DOID:8691!5.78e-07!1 | |ontology_enrichment_disease=DOID:3095!6.42e-09!22;DOID:2994!6.42e-09!22;DOID:0060060!5.78e-07!1;DOID:0060061!5.78e-07!1;DOID:8691!5.78e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0009663!7.40e-20!7;UBERON:0000473!4.43e-18!8;UBERON:0002308!2.05e-15!9;UBERON:0002420!2.05e-15!9;UBERON:0000125!2.05e-15!9;UBERON:0007245!2.05e-15!9;UBERON:0010009!2.05e-15!9;UBERON:0010011!2.05e-15!9;UBERON:0000454!2.05e-15!9;UBERON:0001905!2.03e-13!2;UBERON:0002757!2.03e-13!2;UBERON:0010134!2.03e-13!2;UBERON:0002784!2.03e-13!2;UBERON:0005408!2.03e-13!2;UBERON:0001899!2.03e-13!2;UBERON:0003135!4.27e-13!11;UBERON:0000369!5.92e-13!4;UBERON:0002435!5.92e-13!4;UBERON:0000204!5.92e-13!4;UBERON:0010082!5.92e-13!4;UBERON:0001875!1.52e-12!2;UBERON:0006514!1.52e-12!2;UBERON:0000955!4.62e-11!69;UBERON:0006238!4.62e-11!69;UBERON:0000073!2.96e-10!94;UBERON:0001016!2.96e-10!94;UBERON:0005743!5.60e-10!86;UBERON:0002780!1.36e-09!41;UBERON:0001890!1.36e-09!41;UBERON:0006240!1.36e-09!41;UBERON:0000991!2.23e-09!21;UBERON:0009196!2.23e-09!21;UBERON:0009117!2.23e-09!21;UBERON:0005564!2.23e-09!21;UBERON:0003080!2.46e-09!42;UBERON:0003056!3.02e-09!61;UBERON:0001017!5.89e-09!82;UBERON:0004176!6.33e-09!22;UBERON:0005383!2.36e-08!3;UBERON:0005382!2.36e-08!3;UBERON:0001894!3.39e-08!7;UBERON:0006222!3.39e-08!7;UBERON:0001049!4.09e-08!57;UBERON:0005068!4.09e-08!57;UBERON:0006241!4.09e-08!57;UBERON:0007135!4.09e-08!57;UBERON:0007023!4.87e-08!115;UBERON:0002616!8.69e-08!59;UBERON:0003075!3.01e-07!86;UBERON:0007284!3.01e-07!86;UBERON:0003296!4.07e-07!4;UBERON:0010133!4.07e-07!4;UBERON:0001874!6.12e-07!1;UBERON:0002346!7.84e-07!90;UBERON:0000153!8.87e-07!129;UBERON:0007811!8.87e-07!129 | |ontology_enrichment_uberon=UBERON:0009663!7.40e-20!7;UBERON:0000473!4.43e-18!8;UBERON:0002308!2.05e-15!9;UBERON:0002420!2.05e-15!9;UBERON:0000125!2.05e-15!9;UBERON:0007245!2.05e-15!9;UBERON:0010009!2.05e-15!9;UBERON:0010011!2.05e-15!9;UBERON:0000454!2.05e-15!9;UBERON:0001905!2.03e-13!2;UBERON:0002757!2.03e-13!2;UBERON:0010134!2.03e-13!2;UBERON:0002784!2.03e-13!2;UBERON:0005408!2.03e-13!2;UBERON:0001899!2.03e-13!2;UBERON:0003135!4.27e-13!11;UBERON:0000369!5.92e-13!4;UBERON:0002435!5.92e-13!4;UBERON:0000204!5.92e-13!4;UBERON:0010082!5.92e-13!4;UBERON:0001875!1.52e-12!2;UBERON:0006514!1.52e-12!2;UBERON:0000955!4.62e-11!69;UBERON:0006238!4.62e-11!69;UBERON:0000073!2.96e-10!94;UBERON:0001016!2.96e-10!94;UBERON:0005743!5.60e-10!86;UBERON:0002780!1.36e-09!41;UBERON:0001890!1.36e-09!41;UBERON:0006240!1.36e-09!41;UBERON:0000991!2.23e-09!21;UBERON:0009196!2.23e-09!21;UBERON:0009117!2.23e-09!21;UBERON:0005564!2.23e-09!21;UBERON:0003080!2.46e-09!42;UBERON:0003056!3.02e-09!61;UBERON:0001017!5.89e-09!82;UBERON:0004176!6.33e-09!22;UBERON:0005383!2.36e-08!3;UBERON:0005382!2.36e-08!3;UBERON:0001894!3.39e-08!7;UBERON:0006222!3.39e-08!7;UBERON:0001049!4.09e-08!57;UBERON:0005068!4.09e-08!57;UBERON:0006241!4.09e-08!57;UBERON:0007135!4.09e-08!57;UBERON:0007023!4.87e-08!115;UBERON:0002616!8.69e-08!59;UBERON:0003075!3.01e-07!86;UBERON:0007284!3.01e-07!86;UBERON:0003296!4.07e-07!4;UBERON:0010133!4.07e-07!4;UBERON:0001874!6.12e-07!1;UBERON:0002346!7.84e-07!90;UBERON:0000153!8.87e-07!129;UBERON:0007811!8.87e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000970;1.88e-13;20!UBERON:0002104;7.58e-13;21!UBERON:0000020;8.56e-12;23!UBERON:0001032;2.48e-11;24!UBERON:0004456;2.48e-11;24!UBERON:0000019;6.38e-07;19!UBERON:0000047;6.38e-07;19!UBERON:0004088;6.38e-07;19!UBERON:0010230;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000966,8.63e-20,6;UBERON:0005388,8.63e-20,6;UBERON:0001802,8.63e-20,6;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000970,7.73e-13,21;UBERON:0002104,7.73e-13,21;UBERON:0000020,2.52e-11,24;UBERON:0001032,2.52e-11,24;UBERON:0004456,2.52e-11,24;UBERON:0003056,8.01e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06765333404958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,10.1783348816874,5.04425583328236,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,4.57449882730601,2.68623139945635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,2.74851291863573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0.534434810531121,0.36757959813938,0.50141507858475,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06765333404958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,10.1783348816874,5.04425583328236,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,4.57449882730601,2.68623139945635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,2.74851291863573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0.534434810531121,0.36757959813938,0.50141507858475,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@PPM1N | |short_description=p7@PPM1N | ||
}} | }} |
Latest revision as of 18:20, 18 September 2015
Short description: | p7@PPM1N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPM1N_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -1bp_to_ENST00000396734, ENST00000451287, NM_001080401, uc002pce.2_5end |
EntrezGene: | PPM1N |
HGNC: | 26845 |
UniProt: | Q8N819E7ERC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
retina | 8.63e-20 | 6 |
photoreceptor array | 8.63e-20 | 6 |
posterior segment of eyeball | 8.63e-20 | 6 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
eye | 7.73e-13 | 21 |
visual system | 7.73e-13 | 21 |
sense organ | 2.52e-11 | 24 |
sensory system | 2.52e-11 | 24 |
entire sense organ system | 2.52e-11 | 24 |
pre-chordal neural plate | 8.01e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |