FFCP PHASE1:Hg19::chr19:45411165..45411180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348 | |EntrezGene=348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=613 | |HGNC=613 | ||
|TSSclassifier=strong | |||
|UniProt=Q6LBZ1 | |UniProt=Q6LBZ1 | ||
|association_with_transcript=2bp_to_X00199_5end | |association_with_transcript=2bp_to_X00199_5end | ||
|cluster_id=chr19:45411165..45411180,+ | |||
|coexpression_cluster_id=C848 | |coexpression_cluster_id=C848 | ||
|description=CAGE_peak_5_at_APOE_5end | |description=CAGE_peak_5_at_APOE_5end | ||
|id=chr19:45411165..45411180,+ | |id=chr19:45411165..45411180,+ | ||
|ontology_enrichment_celltype=CL:0000148!3.18e-08!10;CL:0000541!3.18e-08!10 | |ontology_enrichment_celltype=CL:0000148!3.18e-08!10;CL:0000541!3.18e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.95e-19;6!CL:0002619;2.88e-10;3!CL:0000148;3.13e-10;10!CL:0002322;6.91e-10;5!CL:0002575;2.60e-07;2!CL:0000147;4.10e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.52e-20,6;CL:0000148,3.70e-10,10;CL:0000541,3.70e-10,10;CL:0002619,5.49e-10,3;CL:0002322,7.67e-10,5;CL:0002575,3.86e-07,2;CL:0000147,4.58e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.27e-10;3!UBERON:0003057;7.27e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-23!115;UBERON:0001017!1.84e-20!82;UBERON:0001049!1.43e-19!57;UBERON:0005068!1.43e-19!57;UBERON:0006241!1.43e-19!57;UBERON:0007135!1.43e-19!57;UBERON:0005743!1.52e-19!86;UBERON:0002616!5.49e-19!59;UBERON:0000073!5.97e-19!94;UBERON:0001016!5.97e-19!94;UBERON:0000955!8.37e-17!69;UBERON:0006238!8.37e-17!69;UBERON:0002780!1.33e-13!41;UBERON:0001890!1.33e-13!41;UBERON:0006240!1.33e-13!41;UBERON:0003080!4.53e-13!42;UBERON:0002020!8.66e-13!34;UBERON:0003528!8.66e-13!34;UBERON:0001893!2.31e-12!34;UBERON:0002791!7.32e-12!33;UBERON:0003075!1.12e-11!86;UBERON:0007284!1.12e-11!86;UBERON:0002346!1.75e-11!90;UBERON:0001869!2.98e-11!32;UBERON:0000033!2.08e-09!123;UBERON:0002619!2.41e-09!22;UBERON:0000153!3.39e-09!129;UBERON:0007811!3.39e-09!129;UBERON:0000924!1.11e-08!173;UBERON:0006601!1.11e-08!173;UBERON:0004121!1.13e-08!169;UBERON:0001950!5.19e-08!20;UBERON:0003076!5.64e-08!15;UBERON:0003057!5.64e-08!15;UBERON:0000956!1.05e-07!25;UBERON:0000203!1.05e-07!25;UBERON:0003056!1.07e-07!61;UBERON:0002420!2.69e-07!9;UBERON:0007245!2.69e-07!9;UBERON:0010009!2.69e-07!9;UBERON:0010011!2.69e-07!9;UBERON:0000454!2.69e-07!9;UBERON:0002308!3.38e-07!9;UBERON:0000125!3.38e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.58e-23!115;UBERON:0001017!1.84e-20!82;UBERON:0001049!1.43e-19!57;UBERON:0005068!1.43e-19!57;UBERON:0006241!1.43e-19!57;UBERON:0007135!1.43e-19!57;UBERON:0005743!1.52e-19!86;UBERON:0002616!5.49e-19!59;UBERON:0000073!5.97e-19!94;UBERON:0001016!5.97e-19!94;UBERON:0000955!8.37e-17!69;UBERON:0006238!8.37e-17!69;UBERON:0002780!1.33e-13!41;UBERON:0001890!1.33e-13!41;UBERON:0006240!1.33e-13!41;UBERON:0003080!4.53e-13!42;UBERON:0002020!8.66e-13!34;UBERON:0003528!8.66e-13!34;UBERON:0001893!2.31e-12!34;UBERON:0002791!7.32e-12!33;UBERON:0003075!1.12e-11!86;UBERON:0007284!1.12e-11!86;UBERON:0002346!1.75e-11!90;UBERON:0001869!2.98e-11!32;UBERON:0000033!2.08e-09!123;UBERON:0002619!2.41e-09!22;UBERON:0000153!3.39e-09!129;UBERON:0007811!3.39e-09!129;UBERON:0000924!1.11e-08!173;UBERON:0006601!1.11e-08!173;UBERON:0004121!1.13e-08!169;UBERON:0001950!5.19e-08!20;UBERON:0003076!5.64e-08!15;UBERON:0003057!5.64e-08!15;UBERON:0000956!1.05e-07!25;UBERON:0000203!1.05e-07!25;UBERON:0003056!1.07e-07!61;UBERON:0002420!2.69e-07!9;UBERON:0007245!2.69e-07!9;UBERON:0010009!2.69e-07!9;UBERON:0010011!2.69e-07!9;UBERON:0000454!2.69e-07!9;UBERON:0002308!3.38e-07!9;UBERON:0000125!3.38e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.27e-10;3!UBERON:0005174;7.27e-10;3!UBERON:0001137;7.27e-10;3!UBERON:0002107;2.66e-07;19!UBERON:0006925;2.66e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.93e-10,3;UBERON:0005174,7.93e-10,3;UBERON:0001137,7.93e-10,3;UBERON:0002107,2.01e-07,19;UBERON:0006925,2.01e-07,19;UBERON:0008836,2.01e-07,19 | |||
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| ||
|short_description=p5@APOE | |short_description=p5@APOE | ||
}} | }} |
Latest revision as of 14:44, 18 September 2015
Short description: | p5@APOE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOE_5end |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | 2bp_to_X00199_5end |
EntrezGene: | APOE |
HGNC: | 613 |
UniProt: | Q6LBZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.52e-20 | 6 |
melanocyte | 3.70e-10 | 10 |
melanoblast | 3.70e-10 | 10 |
adult endothelial progenitor cell | 5.49e-10 | 3 |
embryonic stem cell | 7.67e-10 | 5 |
central nervous system pericyte | 3.86e-07 | 2 |
pigment cell | 4.58e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.93e-10 | 3 |
dorsal region element | 7.93e-10 | 3 |
dorsum | 7.93e-10 | 3 |
liver | 2.01e-07 | 19 |
digestive gland | 2.01e-07 | 19 |
liver bud | 2.01e-07 | 19 |