FFCP PHASE1:Hg19::chr19:41765598..41765618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=558 | |EntrezGene=558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=905 | |HGNC=905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-380bp_to_X66029_5end | |association_with_transcript=-380bp_to_X66029_5end | ||
|cluster_id=chr19:41765598..41765618,+ | |||
|coexpression_cluster_id=C2490 | |coexpression_cluster_id=C2490 | ||
|description=CAGE_peak_5_at_AXL_5end | |description=CAGE_peak_5_at_AXL_5end | ||
|id=chr19:41765598..41765618,+ | |id=chr19:41765598..41765618,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!7.45e-19!75;CL:0000222!3.24e-12!119;CL:0002620!2.17e-11!23;CL:0000220!2.21e-11!246;CL:0002321!3.76e-11!248;CL:0000077!1.19e-08!19;CL:0000548!5.64e-07!679;CL:0000004!5.64e-07!679;CL:0000255!5.64e-07!679;CL:0000144!7.37e-07!625 | |ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!7.45e-19!75;CL:0000222!3.24e-12!119;CL:0002620!2.17e-11!23;CL:0000220!2.21e-11!246;CL:0002321!3.76e-11!248;CL:0000077!1.19e-08!19;CL:0000548!5.64e-07!679;CL:0000004!5.64e-07!679;CL:0000255!5.64e-07!679;CL:0000144!7.37e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.18e-14;23!CL:0000057;1.03e-10;73!CL:0000077;6.14e-10;19!CL:1000497;3.45e-07;17!CL:0002518;3.45e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.99e-23,76;CL:0002620,4.36e-14,23;CL:0000077,9.52e-10,19;CL:0000222,2.25e-09,121;CL:1000497,1.91e-07,17;CL:0002518,1.91e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.18e-14!365;UBERON:0003102!1.08e-12!95;UBERON:0005256!1.87e-12!143;UBERON:0000481!6.26e-11!347;UBERON:0000119!1.60e-10!312;UBERON:0000468!5.38e-10!659;UBERON:0000914!9.42e-10!83;UBERON:0002329!9.42e-10!83;UBERON:0003077!9.42e-10!83;UBERON:0003059!9.42e-10!83;UBERON:0007282!9.42e-10!83;UBERON:0009618!9.42e-10!83;UBERON:0007285!9.42e-10!83;UBERON:0000483!9.69e-10!309;UBERON:0002100!4.60e-09!216;UBERON:0002199!2.16e-08!45;UBERON:0002416!2.16e-08!45;UBERON:0002097!2.65e-08!40;UBERON:0000486!2.92e-08!82;UBERON:0000467!5.66e-08!625;UBERON:0000480!8.24e-08!626;UBERON:0000477!8.89e-08!286;UBERON:0003104!1.19e-07!238;UBERON:0009142!1.19e-07!238;UBERON:0004290!2.41e-07!70;UBERON:0000490!9.28e-07!138 | |ontology_enrichment_uberon=UBERON:0000475!7.18e-14!365;UBERON:0003102!1.08e-12!95;UBERON:0005256!1.87e-12!143;UBERON:0000481!6.26e-11!347;UBERON:0000119!1.60e-10!312;UBERON:0000468!5.38e-10!659;UBERON:0000914!9.42e-10!83;UBERON:0002329!9.42e-10!83;UBERON:0003077!9.42e-10!83;UBERON:0003059!9.42e-10!83;UBERON:0007282!9.42e-10!83;UBERON:0009618!9.42e-10!83;UBERON:0007285!9.42e-10!83;UBERON:0000483!9.69e-10!309;UBERON:0002100!4.60e-09!216;UBERON:0002199!2.16e-08!45;UBERON:0002416!2.16e-08!45;UBERON:0002097!2.65e-08!40;UBERON:0000486!2.92e-08!82;UBERON:0000467!5.66e-08!625;UBERON:0000480!8.24e-08!626;UBERON:0000477!8.89e-08!286;UBERON:0003104!1.19e-07!238;UBERON:0009142!1.19e-07!238;UBERON:0004290!2.41e-07!70;UBERON:0000490!9.28e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.90e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.26e-10,99;UBERON:0002097,1.37e-08,41;UBERON:0002199,2.29e-08,46;UBERON:0002416,2.29e-08,46;UBERON:0003104,1.89e-07,160;UBERON:0009142,1.89e-07,160;UBERON:0006554,3.16e-07,47;UBERON:0001008,6.38e-07,48 | |||
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| ||
|short_description=p5@AXL | |short_description=p5@AXL | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p5@AXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AXL_5end |
Coexpression cluster: | C2490_Olfactory_mesothelioma_Hair_leiomyoma_mesenchymal_papillary_tenocyte |
Association with transcript: | -380bp_to_X66029_5end |
EntrezGene: | AXL |
HGNC: | 905 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.99e-23 | 76 |
skin fibroblast | 4.36e-14 | 23 |
mesothelial cell | 9.52e-10 | 19 |
mesodermal cell | 2.25e-09 | 121 |
kidney cell | 1.91e-07 | 17 |
kidney epithelial cell | 1.91e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.26e-10 | 99 |
skin of body | 1.37e-08 | 41 |
integument | 2.29e-08 | 46 |
integumental system | 2.29e-08 | 46 |
mesenchyme | 1.89e-07 | 160 |
entire embryonic mesenchyme | 1.89e-07 | 160 |
urinary system structure | 3.16e-07 | 47 |
renal system | 6.38e-07 | 48 |