FFCP PHASE1:Hg19::chr19:3933579..3933594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27231 | |EntrezGene=27231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17871 | |HGNC=17871 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPI5 | |UniProt=Q9NPI5 | ||
|association_with_transcript=41bp_to_ENST00000395034_5end | |association_with_transcript=41bp_to_ENST00000395034_5end | ||
|cluster_id=chr19:3933579..3933594,+ | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_1_at_ITGB1BP3_5end | |description=CAGE_peak_1_at_ITGB1BP3_5end | ||
|id=chr19:3933579..3933594,+ | |id=chr19:3933579..3933594,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.61e-11!7;CL:0000586!4.61e-11!7;CL:0002322!2.59e-09!5;CL:0000188!6.55e-07!9 | |ontology_enrichment_celltype=CL:0000039!4.61e-11!7;CL:0000586!4.61e-11!7;CL:0002322!2.59e-09!5;CL:0000188!6.55e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.65e-15;5!CL:0000039;8.51e-14;7!CL:0000586;8.51e-14;7!CL:0000235;2.97e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.65e-15,5;CL:0000039,8.72e-14,7;CL:0000586,8.72e-14,7;CL:0000235,2.65e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.10e-09;10!UBERON:0005564;3.10e-09;10!UBERON:0005062;2.63e-07;4!UBERON:0007284;2.63e-07;4!UBERON:0003104;4.39e-07;31!UBERON:0006603;5.32e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.15e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.15e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.46e-22!115;UBERON:0003135!2.53e-08!11;UBERON:0000473!9.93e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!5.46e-22!115;UBERON:0003135!2.53e-08!11;UBERON:0000473!9.93e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.17e-11;49!UBERON:0004151;5.74e-10;3!UBERON:0003978;1.21e-09;3!UBERON:0000946;1.21e-09;3!UBERON:0003135;1.17e-08;11!UBERON:0007100;4.02e-08;25!UBERON:0001134;1.16e-07;16!UBERON:0002036;1.16e-07;16!UBERON:0005090;3.75e-07;2!UBERON:0001630;3.75e-07;2!UBERON:0002081;3.75e-07;2!UBERON:0002133;5.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.74e-10,3;UBERON:0003978,1.21e-09,3;UBERON:0009751,1.21e-09,3;UBERON:0000946,1.21e-09,3;UBERON:0002523,1.21e-09,3;UBERON:0005983,1.21e-09,3;UBERON:0002165,1.21e-09,3;UBERON:0002062,1.21e-09,3;UBERON:0007280,1.21e-09,3;UBERON:0003135,1.15e-08,11;UBERON:0007023,1.77e-08,114;UBERON:0003103,7.84e-08,68;UBERON:0007100,2.21e-07,27;UBERON:0005090,3.76e-07,2;UBERON:0001630,3.76e-07,2;UBERON:0002081,3.76e-07,2;UBERON:0010227,3.76e-07,2;UBERON:0002133,5.95e-07,2 | |||
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| ||
|short_description=p1@ITGB1BP3 | |short_description=p1@ITGB1BP3 | ||
}} | }} |
Latest revision as of 20:40, 17 September 2015
Short description: | p1@ITGB1BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGB1BP3_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | 41bp_to_ENST00000395034_5end |
EntrezGene: | ITGB1BP3 |
HGNC: | 17871 |
UniProt: | Q9NPI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.65e-15 | 5 |
germ line cell | 8.72e-14 | 7 |
germ cell | 8.72e-14 | 7 |
macrophage | 2.65e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.74e-10 | 3 |
valve | 1.21e-09 | 3 |
cardiac mesenchyme | 1.21e-09 | 3 |
cardial valve | 1.21e-09 | 3 |
tunica intima | 1.21e-09 | 3 |
heart layer | 1.21e-09 | 3 |
endocardium | 1.21e-09 | 3 |
endocardial cushion | 1.21e-09 | 3 |
presumptive endocardium | 1.21e-09 | 3 |
male reproductive organ | 1.15e-08 | 11 |
adult organism | 1.77e-08 | 114 |
compound organ | 7.84e-08 | 68 |
primary circulatory organ | 2.21e-07 | 27 |
muscle structure | 3.76e-07 | 2 |
muscle organ | 3.76e-07 | 2 |
cardiac atrium | 3.76e-07 | 2 |
future cardiac atrium | 3.76e-07 | 2 |
atrioventricular valve | 5.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.15e-07 | 2 |