FFCP PHASE1:Hg19::chr19:35800769..35800809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:35800769..35800809,+ | |||
|coexpression_cluster_id=C337 | |coexpression_cluster_id=C337 | ||
|description=CAGE_peak_at_chr19:35800769..35800809,+ | |description=CAGE_peak_at_chr19:35800769..35800809,+ | ||
|id=chr19:35800769..35800809,+ | |id=chr19:35800769..35800809,+ | ||
|ontology_enrichment_celltype=CL:0000746!6.59e-07!3;CL:0000513!6.59e-07!3 | |ontology_enrichment_celltype=CL:0000746!6.59e-07!3;CL:0000513!6.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.77e-16;3!CL:0000737;1.77e-12;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.78e-16,3;CL:0000513,1.78e-16,3;CL:0000737,1.77e-12,4 | |||
|ontology_enrichment_development_v019=CL:0000513;1.77e-16;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-20!115;UBERON:0000025!2.96e-11!194;UBERON:0001049!3.34e-10!57;UBERON:0005068!3.34e-10!57;UBERON:0006241!3.34e-10!57;UBERON:0007135!3.34e-10!57;UBERON:0003075!9.96e-10!86;UBERON:0007284!9.96e-10!86;UBERON:0000483!1.50e-09!309;UBERON:0000119!2.74e-09!312;UBERON:0002346!6.05e-09!90;UBERON:0004111!7.74e-09!241;UBERON:0002298!9.79e-09!8;UBERON:0000477!1.58e-08!286;UBERON:0001048!2.75e-08!168;UBERON:0000481!4.08e-08!347;UBERON:0000062!8.23e-08!511;UBERON:0002616!1.06e-07!59;UBERON:0005743!4.22e-07!86;UBERON:0001017!5.06e-07!82;UBERON:0000922!6.61e-07!612;UBERON:0000468!8.39e-07!659;UBERON:0002050!8.64e-07!605;UBERON:0005423!8.64e-07!605 | |ontology_enrichment_uberon=UBERON:0007023!1.33e-20!115;UBERON:0000025!2.96e-11!194;UBERON:0001049!3.34e-10!57;UBERON:0005068!3.34e-10!57;UBERON:0006241!3.34e-10!57;UBERON:0007135!3.34e-10!57;UBERON:0003075!9.96e-10!86;UBERON:0007284!9.96e-10!86;UBERON:0000483!1.50e-09!309;UBERON:0000119!2.74e-09!312;UBERON:0002346!6.05e-09!90;UBERON:0004111!7.74e-09!241;UBERON:0002298!9.79e-09!8;UBERON:0000477!1.58e-08!286;UBERON:0001048!2.75e-08!168;UBERON:0000481!4.08e-08!347;UBERON:0000062!8.23e-08!511;UBERON:0002616!1.06e-07!59;UBERON:0005743!4.22e-07!86;UBERON:0001017!5.06e-07!82;UBERON:0000922!6.61e-07!612;UBERON:0000468!8.39e-07!659;UBERON:0002050!8.64e-07!605;UBERON:0005423!8.64e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;8.01e-11;2!UBERON:0000922;4.26e-08;49!UBERON:0002110;1.12e-07;3!UBERON:0002075;8.83e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,6.49e-13,54;UBERON:0002553,4.04e-11,61;UBERON:0000341,5.00e-11,2;UBERON:0001048,5.49e-10,160;UBERON:0002323,4.97e-09,46;UBERON:0005177,5.87e-09,101;UBERON:0005172,6.85e-09,54;UBERON:0005173,6.85e-09,54;UBERON:0004458,2.30e-08,49;UBERON:0002110,7.90e-08,3;UBERON:0006242,7.90e-08,3;UBERON:0002417,8.52e-08,60;UBERON:0000916,8.52e-08,60;UBERON:0003887,6.65e-07,12;UBERON:0002075,6.72e-07,18 | |||
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| ||
|short_description=p@chr19:35800769..35800809,+ | |short_description=p@chr19:35800769..35800809,+ | ||
}} | }} |
Latest revision as of 06:41, 26 July 2015
Short description: | p@chr19:35800769..35800809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35800769..35800809, + |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.78e-16 | 3 |
cardiac muscle myoblast | 1.78e-16 | 3 |
striated muscle cell | 1.77e-12 | 4 |
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 6.49e-13 | 54 |
anatomical cavity | 4.04e-11 | 61 |
throat | 5.00e-11 | 2 |
primordium | 5.49e-10 | 160 |
body cavity | 4.97e-09 | 46 |
trunk region element | 5.87e-09 | 101 |
abdomen element | 6.85e-09 | 54 |
abdominal segment element | 6.85e-09 | 54 |
body cavity or lining | 2.30e-08 | 49 |
gallbladder | 7.90e-08 | 3 |
gall bladder primordium | 7.90e-08 | 3 |
abdominal segment of trunk | 8.52e-08 | 60 |
abdomen | 8.52e-08 | 60 |
intraembryonic coelom | 6.65e-07 | 12 |
viscus | 6.72e-07 | 18 |