FFCP PHASE1:Hg19::chr19:18313362..18313386,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5864 | |EntrezGene=5864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9777 | |HGNC=9777 | ||
|TSSclassifier=strong | |||
|UniProt=P20336 | |UniProt=P20336 | ||
|association_with_transcript=163bp_to_AB464121,AF498931,EU831985,EU832078_5end | |association_with_transcript=163bp_to_AB464121,AF498931,EU831985,EU832078_5end | ||
|cluster_id=chr19:18313362..18313386,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_7_at_RAB3A_5end | |description=CAGE_peak_7_at_RAB3A_5end | ||
|id=chr19:18313362..18313386,- | |id=chr19:18313362..18313386,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.51e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,8.49e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.22e-13;82!UBERON:0006222;5.51e-09;1!UBERON:0006238;8.72e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.82e-43!57;UBERON:0005068!4.82e-43!57;UBERON:0006241!4.82e-43!57;UBERON:0007135!4.82e-43!57;UBERON:0000955!1.59e-41!69;UBERON:0006238!1.59e-41!69;UBERON:0001017!5.77e-41!82;UBERON:0002346!1.13e-40!90;UBERON:0005743!3.29e-40!86;UBERON:0002619!9.24e-40!22;UBERON:0002020!1.05e-39!34;UBERON:0003528!1.05e-39!34;UBERON:0001893!1.13e-39!34;UBERON:0001869!1.27e-39!32;UBERON:0003075!1.47e-39!86;UBERON:0007284!1.47e-39!86;UBERON:0002780!3.48e-39!41;UBERON:0001890!3.48e-39!41;UBERON:0006240!3.48e-39!41;UBERON:0002616!7.54e-39!59;UBERON:0000073!2.23e-38!94;UBERON:0001016!2.23e-38!94;UBERON:0003080!4.96e-38!42;UBERON:0002791!7.53e-38!33;UBERON:0000956!2.54e-37!25;UBERON:0000203!2.54e-37!25;UBERON:0001950!2.21e-36!20;UBERON:0003056!5.90e-32!61;UBERON:0000924!2.79e-29!173;UBERON:0006601!2.79e-29!173;UBERON:0000033!2.15e-28!123;UBERON:0004121!4.52e-28!169;UBERON:0007023!1.63e-26!115;UBERON:0000153!2.22e-26!129;UBERON:0007811!2.22e-26!129;UBERON:0000025!1.27e-13!194;UBERON:0000200!5.02e-13!6;UBERON:0001871!6.78e-13!7;UBERON:0004111!3.45e-11!241;UBERON:0001872!9.27e-11!5;UBERON:0000349!1.77e-10!5;UBERON:0002021!2.15e-10!5;UBERON:0000475!2.04e-09!365;UBERON:0000477!3.05e-09!286;UBERON:0000483!5.72e-09!309;UBERON:0000119!9.80e-09!312;UBERON:0000064!2.50e-08!219;UBERON:0002771!2.88e-07!3;UBERON:0004733!4.66e-07!12;UBERON:0002028!4.66e-07!12;UBERON:0007277!4.66e-07!12;UBERON:0003076!5.10e-07!15;UBERON:0003057!5.10e-07!15;UBERON:0000988!7.80e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!4.82e-43!57;UBERON:0005068!4.82e-43!57;UBERON:0006241!4.82e-43!57;UBERON:0007135!4.82e-43!57;UBERON:0000955!1.59e-41!69;UBERON:0006238!1.59e-41!69;UBERON:0001017!5.77e-41!82;UBERON:0002346!1.13e-40!90;UBERON:0005743!3.29e-40!86;UBERON:0002619!9.24e-40!22;UBERON:0002020!1.05e-39!34;UBERON:0003528!1.05e-39!34;UBERON:0001893!1.13e-39!34;UBERON:0001869!1.27e-39!32;UBERON:0003075!1.47e-39!86;UBERON:0007284!1.47e-39!86;UBERON:0002780!3.48e-39!41;UBERON:0001890!3.48e-39!41;UBERON:0006240!3.48e-39!41;UBERON:0002616!7.54e-39!59;UBERON:0000073!2.23e-38!94;UBERON:0001016!2.23e-38!94;UBERON:0003080!4.96e-38!42;UBERON:0002791!7.53e-38!33;UBERON:0000956!2.54e-37!25;UBERON:0000203!2.54e-37!25;UBERON:0001950!2.21e-36!20;UBERON:0003056!5.90e-32!61;UBERON:0000924!2.79e-29!173;UBERON:0006601!2.79e-29!173;UBERON:0000033!2.15e-28!123;UBERON:0004121!4.52e-28!169;UBERON:0007023!1.63e-26!115;UBERON:0000153!2.22e-26!129;UBERON:0007811!2.22e-26!129;UBERON:0000025!1.27e-13!194;UBERON:0000200!5.02e-13!6;UBERON:0001871!6.78e-13!7;UBERON:0004111!3.45e-11!241;UBERON:0001872!9.27e-11!5;UBERON:0000349!1.77e-10!5;UBERON:0002021!2.15e-10!5;UBERON:0000475!2.04e-09!365;UBERON:0000477!3.05e-09!286;UBERON:0000483!5.72e-09!309;UBERON:0000119!9.80e-09!312;UBERON:0000064!2.50e-08!219;UBERON:0002771!2.88e-07!3;UBERON:0004733!4.66e-07!12;UBERON:0002028!4.66e-07!12;UBERON:0007277!4.66e-07!12;UBERON:0003076!5.10e-07!15;UBERON:0003057!5.10e-07!15;UBERON:0000988!7.80e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.21e-69;20!UBERON:0002619;3.84e-63;22!UBERON:0000956;1.40e-55;25!UBERON:0000203;1.40e-55;25!UBERON:0001869;2.51e-54;32!UBERON:0001893;2.42e-52;34!UBERON:0002791;2.90e-47;32!UBERON:0003528;2.14e-41;34!UBERON:0002020;2.14e-41;34!UBERON:0002780;1.22e-32;41!UBERON:0001890;1.22e-32;41!UBERON:0000200;1.94e-32;6!UBERON:0001871;1.02e-27;6!UBERON:0001870;5.32e-24;3!UBERON:0000955;6.60e-24;68!UBERON:0001017;1.19e-23;75!UBERON:0000073;3.11e-21;53!UBERON:0002616;3.11e-21;53!UBERON:0002702;8.86e-17;2!UBERON:0001876;2.98e-16;2!UBERON:0002021;1.42e-14;5!UBERON:0001872;2.46e-14;5!UBERON:0001016;1.28e-13;83!UBERON:0002902;2.12e-09;1!UBERON:0009899;2.12e-09;1!UBERON:0002581;5.51e-09;1!UBERON:0001874;5.51e-09;1!UBERON:0007190;5.51e-09;1!UBERON:0002420;3.41e-08;9!UBERON:0007245;3.41e-08;9!UBERON:0010009;3.41e-08;9!UBERON:0010011;3.41e-08;9!UBERON:0000454;3.41e-08;9!UBERON:0000349;4.99e-07;5!UBERON:0007023;5.19e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.14e-69,20;UBERON:0002619,3.73e-63,22;UBERON:0001869,9.83e-57,32;UBERON:0000956,1.37e-55,25;UBERON:0000203,1.37e-55,25;UBERON:0001893,2.48e-53,34;UBERON:0002791,9.14e-50,32;UBERON:0002780,9.84e-50,41;UBERON:0001890,9.84e-50,41;UBERON:0003080,9.84e-50,41;UBERON:0006240,9.84e-50,41;UBERON:0003528,9.02e-47,34;UBERON:0002020,9.02e-47,34;UBERON:0001017,3.88e-45,81;UBERON:0000955,8.13e-45,68;UBERON:0006238,8.13e-45,68;UBERON:0000073,1.05e-42,53;UBERON:0002616,1.05e-42,53;UBERON:0001016,2.32e-40,89;UBERON:0001049,2.73e-40,56;UBERON:0005068,2.73e-40,56;UBERON:0006241,2.73e-40,56;UBERON:0007135,2.73e-40,56;UBERON:0003056,1.02e-32,61;UBERON:0000200,4.68e-32,6;UBERON:0003075,6.96e-30,82;UBERON:0007284,6.96e-30,82;UBERON:0002346,2.35e-28,86;UBERON:0001871,7.79e-28,6;UBERON:0001870,1.36e-23,3;UBERON:0007023,1.65e-23,114;UBERON:0010371,6.50e-23,104;UBERON:0004121,1.54e-21,171;UBERON:0000924,1.54e-21,171;UBERON:0006601,1.54e-21,171;UBERON:0010314,2.28e-17,132;UBERON:0002702,1.88e-16,2;UBERON:0001876,2.56e-16,2;UBERON:0011216,1.39e-15,223;UBERON:0002021,1.10e-14,5;UBERON:0001872,2.20e-14,5;UBERON:0000025,6.88e-11,192;UBERON:0002902,2.22e-09,1;UBERON:0009899,2.22e-09,1;UBERON:0007190,5.75e-09,1;UBERON:0001874,6.22e-09,1;UBERON:0002581,7.27e-09,1;UBERON:0002420,3.38e-08,9;UBERON:0007245,3.38e-08,9;UBERON:0010009,3.38e-08,9;UBERON:0010011,3.38e-08,9;UBERON:0000454,3.38e-08,9;UBERON:0004111,5.05e-08,240;UBERON:0000349,4.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,1.93866549219044,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.884634079449797,0.591095237907095,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,1.1713222286267,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2029051231617,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.134366944973453,0.360299883542404,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,6.71144456960797,1.001527445652,0,0.110929051536852,0.372578417648301,0.138348634936231,0,0,0.285465333544967,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.770750701157514,1.41696576325585,0.319267718114302,1.64093091392604,0.252071696221718,2.14387482639075,0.807378228159255,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,1.35075169236789,1.56215619722769,1.44680757550829,0.887821342714695,0.546974809018219,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,1.01954599465248,1.18390992413128,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.24371917630019,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,1.93866549219044,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.884634079449797,0.591095237907095,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,1.1713222286267,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2029051231617,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.134366944973453,0.360299883542404,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,6.71144456960797,1.001527445652,0,0.110929051536852,0.372578417648301,0.138348634936231,0,0,0.285465333544967,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.770750701157514,1.41696576325585,0.319267718114302,1.64093091392604,0.252071696221718,2.14387482639075,0.807378228159255,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,1.35075169236789,1.56215619722769,1.44680757550829,0.887821342714695,0.546974809018219,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,1.01954599465248,1.18390992413128,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.24371917630019,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p7@RAB3A | |short_description=p7@RAB3A | ||
}} | }} |
Latest revision as of 14:43, 16 September 2015
Short description: | p7@RAB3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RAB3A_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 163bp_to_AB464121, AF498931, EU831985, EU832078_5end |
EntrezGene: | RAB3A |
HGNC: | 9777 |
UniProt: | P20336 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 8.49e-09 | 1 |