FFCP PHASE1:Hg19::chr18:56246399..56246415,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:56246399..56246415,-
|short_description=p15@ALPK2
|description=CAGE_peak_15_at_ALPK2_5end
|association_with_transcript=-45bp_to_AK092133,AX747371_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-45bp_to_AK092133,AX747371_5end | |||
|cluster_id=chr18:56246399..56246415,- | |||
|coexpression_cluster_id=C1324 | |||
|description=CAGE_peak_15_at_ALPK2_5end | |||
|id=chr18:56246399..56246415,- | |||
|ontology_enrichment_celltype=CL:0000057!1.02e-21!75;CL:0000055!4.69e-17!180;CL:0002620!2.20e-14!23;CL:0000048!1.99e-12!430;CL:0000723!8.73e-12!436;CL:0000034!5.77e-11!444;CL:0000134!3.53e-10!358;CL:0000219!3.83e-10!390;CL:0000144!9.40e-10!625;CL:0002320!1.84e-09!365;CL:0000548!3.37e-09!679;CL:0000004!3.37e-09!679;CL:0000255!3.37e-09!679;CL:0000012!5.92e-09!682;CL:0002334!7.56e-09!12;CL:0002371!4.92e-08!591;CL:0000077!4.80e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.49e-27;23!CL:0000346;2.37e-13;3!CL:1000428;2.37e-13;3!CL:0002559;3.35e-08;5!CL:0000057;1.06e-07;73!CL:0002579;8.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.05e-26,23;CL:0000057,3.10e-19,76;CL:0000346,2.83e-13,3;CL:1000428,2.83e-13,3;CL:0002559,3.71e-08,5;CL:0000134,1.36e-07,354;CL:0002320,2.66e-07,361;CL:0002579,7.38e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.37e-10!14;DOID:17!9.93e-08!5;DOID:450!9.93e-08!5;DOID:66!9.93e-08!5;DOID:423!9.93e-08!5;DOID:0080000!9.93e-08!5;DOID:11722!9.93e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;6.05e-23;5!DOID:450;6.05e-23;5!DOID:66;6.05e-23;5!DOID:423;6.05e-23;5!DOID:0080000;6.05e-23;5!DOID:11722;6.05e-23;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.46e-23,5;DOID:450,7.46e-23,5;DOID:66,7.46e-23,5;DOID:423,7.46e-23,5;DOID:0080000,7.46e-23,5;DOID:11722,7.46e-23,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.70e-11!40;UBERON:0002199!4.98e-11!45;UBERON:0002416!4.98e-11!45;UBERON:0002384!1.07e-10!375;UBERON:0003102!2.94e-10!95;UBERON:0002118!8.28e-07!5;UBERON:0004532!8.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.91e-20;41!UBERON:0002199;6.63e-14;46!UBERON:0002416;6.63e-14;46!UBERON:0000412;2.37e-13;3!UBERON:0001992;2.37e-13;3!UBERON:0003102;8.54e-12;50!UBERON:0005406;1.81e-09;2!UBERON:0002073;3.35e-08;5!UBERON:0001013;2.21e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.52e-25,41;UBERON:0002199,1.21e-21,46;UBERON:0002416,1.21e-21,46;UBERON:0000412,2.83e-13,3;UBERON:0001992,2.83e-13,3;UBERON:0003102,1.27e-10,99;UBERON:0005406,1.34e-09,2;UBERON:0002384,4.77e-09,371;UBERON:0002073,3.71e-08,5;UBERON:0005086,3.71e-08,5;UBERON:0001013,2.06e-07,14 | |||
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|phase1_expression=0.363356758541113,0.642301571672949,0.845726424575827,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.962787081228281,0.639337125799041,0,0,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,3.17782033951725,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0.741800787835671,0,0,0,0,1.10825646193673,0.877955241761676,6.74273150757843,0.150238058906597,0.226864366320042,8.07253360599879,2.34913127700424,1.27159140695737,6.00182192168805,3.50378599410692,6.69865404118636,3.35010341396862,3.20675031258406,0.876933046450788,13.6314238091822,3.49789614840738,0.161646056818812,11.3603069605317,6.14587799188606,0.67824236924195,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,1.80980402060889,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,1.80863626235752,1.74306691720059,1.59956785891291,0,0,0,0.958499421966331,0,0,0.434343920002738,0,2.32779252211864,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.946214490203608,0.234282829985426,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0,0,0,0,0.496215615637554,6.1384789315225,0.561320188866147,2.05022638809122,0,1.76939313257968,1.48418066444991,0.771048469013278,0.177561725313127,0.574890092096664,0,0.697262270759755,0,0,0,0.803701137152247,0.728364672026868,0.393373244878272,0,0,0,0,0.527758144464379,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,2.83331112147576,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.953150969619124,0,0,0,0.78494864019923,0,0.274537029736055,0.589062011728432,0,0,0,0,0,0,0.682499557039929,0.848432591722276,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0,0,0.409074730008619,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0.720599767084807,0,0,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.40227985908335,0,0.378806010550178,0.251567901752575,0,0,0.302461847526478,0.621748802331122,0,0.796483835818512,0,0.465788870628778,0.829412415681711,0.53168342911599,0.521745061811734,1.05180326298053,0.380805212168795,2.03435366602331,0.727394636810238,0.537052785212442,0.928067519756987,2.3885753321917,0.800055529326307,1.71697852591396,0.673498977531838,0,0,0.643324774124777,0.260994291965212,0.226705925512272,0,0.489473409012935,0.537266523244462,0.308801447160972,0.657852148736121,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0,0,0.398594520940089,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,1.52552838186867,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p15@ALPK2 | |||
}} | }} |
Latest revision as of 00:03, 20 September 2015
Short description: | p15@ALPK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ALPK2_5end |
Coexpression cluster: | C1324_Fibroblast_Preadipocyte_basal_migratory_mesenchymal_Smooth_spindle |
Association with transcript: | -45bp_to_AK092133, AX747371_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.05e-26 | 23 |
fibroblast | 3.10e-19 | 76 |
hair follicle dermal papilla cell | 2.83e-13 | 3 |
stem cell of epidermis | 2.83e-13 | 3 |
hair follicle cell | 3.71e-08 | 5 |
mesenchymal cell | 1.36e-07 | 354 |
connective tissue cell | 2.66e-07 | 361 |
omentum preadipocyte | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.52e-25 | 41 |
integument | 1.21e-21 | 46 |
integumental system | 1.21e-21 | 46 |
dermal papilla | 2.83e-13 | 3 |
papillary layer of dermis | 2.83e-13 | 3 |
surface structure | 1.27e-10 | 99 |
perirenal fat | 1.34e-09 | 2 |
connective tissue | 4.77e-09 | 371 |
hair follicle | 3.71e-08 | 5 |
hair follicle placode | 3.71e-08 | 5 |
adipose tissue | 2.06e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.46e-23 | 5 |
myotonic disease | 7.46e-23 | 5 |
muscle tissue disease | 7.46e-23 | 5 |
myopathy | 7.46e-23 | 5 |
muscular disease | 7.46e-23 | 5 |
myotonic dystrophy | 7.46e-23 | 5 |