FFCP PHASE1:Hg19::chr17:75316024..75316071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=427bp_to_ENST00000329047,NM_006640,uc002jtu.3_5end | |association_with_transcript=427bp_to_ENST00000329047,NM_006640,uc002jtu.3_5end | ||
|cluster_id=chr17:75316024..75316071,+ | |||
|coexpression_cluster_id=C3685 | |coexpression_cluster_id=C3685 | ||
|description=CAGE_peak_16_at_SEPT9_5end | |description=CAGE_peak_16_at_SEPT9_5end | ||
|id=chr17:75316024..75316071,+ | |id=chr17:75316024..75316071,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.79e-40!180;CL:0000057!3.30e-22!75;CL:0000183!4.39e-18!59;CL:0000680!5.72e-17!57;CL:0000056!5.72e-17!57;CL:0000355!5.72e-17!57;CL:0000187!2.81e-16!54;CL:0000048!8.75e-16!430;CL:0000192!5.18e-15!42;CL:0000514!5.18e-15!42;CL:0000723!6.44e-15!436;CL:0000034!3.09e-13!444;CL:0000393!3.22e-12!60;CL:0000211!3.22e-12!60;CL:0000359!7.80e-12!32;CL:0002620!1.52e-10!23;CL:0002371!1.80e-08!591;CL:0002320!2.13e-07!365 | |ontology_enrichment_celltype=CL:0000055!2.79e-40!180;CL:0000057!3.30e-22!75;CL:0000183!4.39e-18!59;CL:0000680!5.72e-17!57;CL:0000056!5.72e-17!57;CL:0000355!5.72e-17!57;CL:0000187!2.81e-16!54;CL:0000048!8.75e-16!430;CL:0000192!5.18e-15!42;CL:0000514!5.18e-15!42;CL:0000723!6.44e-15!436;CL:0000034!3.09e-13!444;CL:0000393!3.22e-12!60;CL:0000211!3.22e-12!60;CL:0000359!7.80e-12!32;CL:0002620!1.52e-10!23;CL:0002371!1.80e-08!591;CL:0002320!2.13e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.45e-13;23!CL:0000057;1.40e-12;73!CL:0000359;9.86e-12;32!CL:0000192;4.63e-11;43!CL:0000187;3.95e-10;55!CL:0002494;2.48e-08;16!CL:0002320;3.42e-08;188!CL:0000134;3.72e-08;55!CL:0000393;6.13e-08;61!CL:0000211;6.13e-08;61!CL:0000048;2.53e-07;58!CL:0000723;6.93e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.47e-29,76;CL:0000048,4.01e-21,427;CL:0000723,5.85e-20,433;CL:0000034,1.79e-18,441;CL:0000680,4.98e-18,58;CL:0000056,4.98e-18,58;CL:0000355,4.98e-18,58;CL:0000187,3.86e-17,55;CL:0000192,2.34e-15,43;CL:0000514,2.34e-15,43;CL:0000393,7.76e-14,61;CL:0000211,7.76e-14,61;CL:0002620,4.38e-13,23;CL:0000359,1.34e-12,32;CL:0002320,1.97e-10,361;CL:0000219,2.71e-10,386;CL:0000134,2.39e-09,354;CL:0002494,2.00e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.63e-11;43!CL:0000355;3.60e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.58e-20!70;UBERON:0000914!3.12e-20!83;UBERON:0002329!3.12e-20!83;UBERON:0003077!3.12e-20!83;UBERON:0003059!3.12e-20!83;UBERON:0007282!3.12e-20!83;UBERON:0009618!3.12e-20!83;UBERON:0007285!3.12e-20!83;UBERON:0001134!9.47e-17!61;UBERON:0002036!9.47e-17!61;UBERON:0003082!9.47e-17!61;UBERON:0000486!1.52e-16!82;UBERON:0002385!3.16e-16!63;UBERON:0001015!3.16e-16!63;UBERON:0000383!3.16e-16!63;UBERON:0005256!2.25e-11!143;UBERON:0002097!6.64e-09!40;UBERON:0002199!6.70e-09!45;UBERON:0002416!6.70e-09!45;UBERON:0002384!5.58e-08!375;UBERON:0004872!1.48e-07!84;UBERON:0003102!5.25e-07!95 | |ontology_enrichment_uberon=UBERON:0004290!1.58e-20!70;UBERON:0000914!3.12e-20!83;UBERON:0002329!3.12e-20!83;UBERON:0003077!3.12e-20!83;UBERON:0003059!3.12e-20!83;UBERON:0007282!3.12e-20!83;UBERON:0009618!3.12e-20!83;UBERON:0007285!3.12e-20!83;UBERON:0001134!9.47e-17!61;UBERON:0002036!9.47e-17!61;UBERON:0003082!9.47e-17!61;UBERON:0000486!1.52e-16!82;UBERON:0002385!3.16e-16!63;UBERON:0001015!3.16e-16!63;UBERON:0000383!3.16e-16!63;UBERON:0005256!2.25e-11!143;UBERON:0002097!6.64e-09!40;UBERON:0002199!6.70e-09!45;UBERON:0002416!6.70e-09!45;UBERON:0002384!5.58e-08!375;UBERON:0004872!1.48e-07!84;UBERON:0003102!5.25e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.10e-09;41!UBERON:0002199;4.82e-08;46!UBERON:0002416;4.82e-08;46!UBERON:0003102;9.20e-08;50!UBERON:0002384;1.75e-07;198!UBERON:0002385;3.54e-07;31!UBERON:0001015;3.54e-07;31!UBERON:0000383;3.54e-07;31 | |||
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| ||
|short_description=p16@SEPT9 | |short_description=p16@SEPT9 | ||
}} | }} |
Latest revision as of 18:20, 17 September 2015
Short description: | p16@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SEPT9_5end |
Coexpression cluster: | C3685_Fibroblast_Pericytes_Mesenchymal_Meningeal_Trabecular_Adipocyte_Saos2 |
Association with transcript: | 427bp_to_ENST00000329047, NM_006640, uc002jtu.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.47e-29 | 76 |
multi fate stem cell | 4.01e-21 | 427 |
somatic stem cell | 5.85e-20 | 433 |
stem cell | 1.79e-18 | 441 |
muscle precursor cell | 4.98e-18 | 58 |
myoblast | 4.98e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.98e-18 | 58 |
muscle cell | 3.86e-17 | 55 |
smooth muscle cell | 2.34e-15 | 43 |
smooth muscle myoblast | 2.34e-15 | 43 |
electrically responsive cell | 7.76e-14 | 61 |
electrically active cell | 7.76e-14 | 61 |
skin fibroblast | 4.38e-13 | 23 |
vascular associated smooth muscle cell | 1.34e-12 | 32 |
connective tissue cell | 1.97e-10 | 361 |
motile cell | 2.71e-10 | 386 |
mesenchymal cell | 2.39e-09 | 354 |
cardiocyte | 2.00e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.51e-22 | 78 |
somite | 1.64e-22 | 71 |
presomitic mesoderm | 1.64e-22 | 71 |
presumptive segmental plate | 1.64e-22 | 71 |
dermomyotome | 1.64e-22 | 71 |
trunk paraxial mesoderm | 1.64e-22 | 71 |
dense mesenchyme tissue | 2.71e-22 | 73 |
paraxial mesoderm | 6.92e-22 | 72 |
presumptive paraxial mesoderm | 6.92e-22 | 72 |
skeletal muscle tissue | 7.60e-18 | 62 |
striated muscle tissue | 7.60e-18 | 62 |
myotome | 7.60e-18 | 62 |
multilaminar epithelium | 9.42e-18 | 83 |
muscle tissue | 1.62e-17 | 64 |
musculature | 1.62e-17 | 64 |
musculature of body | 1.62e-17 | 64 |
trunk mesenchyme | 2.49e-15 | 122 |
integument | 8.15e-13 | 46 |
integumental system | 8.15e-13 | 46 |
skin of body | 1.97e-12 | 41 |
mesenchyme | 2.17e-12 | 160 |
entire embryonic mesenchyme | 2.17e-12 | 160 |
connective tissue | 2.24e-11 | 371 |
unilaminar epithelium | 2.97e-08 | 148 |
splanchnic layer of lateral plate mesoderm | 4.36e-08 | 83 |
surface structure | 5.00e-07 | 99 |