FFCP PHASE1:Hg19::chr17:74864476..74864592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146664 | |EntrezGene=146664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24140 | |HGNC=24140 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000374998_5end | |association_with_transcript=0bp_to_ENST00000374998_5end | ||
|cluster_id=chr17:74864476..74864592,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_MGAT5B_5end | |description=CAGE_peak_1_at_MGAT5B_5end | ||
|id=chr17:74864476..74864592,+ | |id=chr17:74864476..74864592,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.52e-13!254;CL:0000133!1.40e-11!59;CL:0000221!2.92e-10!71;CL:0000333!5.48e-10!41;CL:0002319!1.90e-09!25;CL:0000148!5.73e-07!10;CL:0000541!5.73e-07!10 | |ontology_enrichment_celltype=CL:0000066!3.52e-13!254;CL:0000133!1.40e-11!59;CL:0000221!2.92e-10!71;CL:0000333!5.48e-10!41;CL:0002319!1.90e-09!25;CL:0000148!5.73e-07!10;CL:0000541!5.73e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.21e-11;25!CL:0000148;1.78e-09;10!CL:0000147;7.25e-07;14!CL:0000095;9.55e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,8.70e-14,59;CL:0000333,1.34e-12,41;CL:0002319,2.01e-11,25;CL:0000221,3.47e-11,72;CL:0000148,1.82e-09,10;CL:0000541,1.82e-09,10;CL:0000066,5.20e-08,253;CL:0000147,8.23e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.10e-10;82!UBERON:0008947;1.15e-08;29!UBERON:0006238;1.70e-08;10!CL:0000133;1.43e-07;59 | |||
|ontology_enrichment_disease=DOID:0050687!4.34e-17!143;DOID:305!3.77e-13!106;DOID:162!1.70e-10!235;DOID:14566!1.19e-09!239 | |ontology_enrichment_disease=DOID:0050687!4.34e-17!143;DOID:305!3.77e-13!106;DOID:162!1.70e-10!235;DOID:14566!1.19e-09!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.70e-16,143;DOID:305,2.84e-11,106;DOID:162,3.05e-11,235;DOID:14566,1.84e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.43e-36!82;UBERON:0005743!1.86e-35!86;UBERON:0000073!5.39e-35!94;UBERON:0001016!5.39e-35!94;UBERON:0000955!9.95e-30!69;UBERON:0006238!9.95e-30!69;UBERON:0001049!1.88e-27!57;UBERON:0005068!1.88e-27!57;UBERON:0006241!1.88e-27!57;UBERON:0007135!1.88e-27!57;UBERON:0004121!4.70e-25!169;UBERON:0000924!1.13e-24!173;UBERON:0006601!1.13e-24!173;UBERON:0003075!1.27e-24!86;UBERON:0007284!1.27e-24!86;UBERON:0002616!6.89e-24!59;UBERON:0002346!9.37e-24!90;UBERON:0002780!3.98e-22!41;UBERON:0001890!3.98e-22!41;UBERON:0006240!3.98e-22!41;UBERON:0000033!4.95e-22!123;UBERON:0003080!5.17e-21!42;UBERON:0001869!1.52e-20!32;UBERON:0001893!2.43e-20!34;UBERON:0000153!2.63e-20!129;UBERON:0007811!2.63e-20!129;UBERON:0002020!6.40e-20!34;UBERON:0003528!6.40e-20!34;UBERON:0002791!1.29e-19!33;UBERON:0003056!5.01e-19!61;UBERON:0000956!3.16e-16!25;UBERON:0000203!3.16e-16!25;UBERON:0002619!3.66e-15!22;UBERON:0001950!4.08e-14!20;UBERON:0000064!9.14e-12!219;UBERON:0000475!6.80e-11!365;UBERON:0000025!2.85e-10!194;UBERON:0000477!9.54e-10!286;UBERON:0000481!2.96e-08!347;UBERON:0004111!3.05e-08!241;UBERON:0000483!1.04e-07!309;UBERON:0000119!1.23e-07!312;UBERON:0003076!1.33e-07!15;UBERON:0003057!1.33e-07!15;UBERON:0007023!2.50e-07!115 | |ontology_enrichment_uberon=UBERON:0001017!9.43e-36!82;UBERON:0005743!1.86e-35!86;UBERON:0000073!5.39e-35!94;UBERON:0001016!5.39e-35!94;UBERON:0000955!9.95e-30!69;UBERON:0006238!9.95e-30!69;UBERON:0001049!1.88e-27!57;UBERON:0005068!1.88e-27!57;UBERON:0006241!1.88e-27!57;UBERON:0007135!1.88e-27!57;UBERON:0004121!4.70e-25!169;UBERON:0000924!1.13e-24!173;UBERON:0006601!1.13e-24!173;UBERON:0003075!1.27e-24!86;UBERON:0007284!1.27e-24!86;UBERON:0002616!6.89e-24!59;UBERON:0002346!9.37e-24!90;UBERON:0002780!3.98e-22!41;UBERON:0001890!3.98e-22!41;UBERON:0006240!3.98e-22!41;UBERON:0000033!4.95e-22!123;UBERON:0003080!5.17e-21!42;UBERON:0001869!1.52e-20!32;UBERON:0001893!2.43e-20!34;UBERON:0000153!2.63e-20!129;UBERON:0007811!2.63e-20!129;UBERON:0002020!6.40e-20!34;UBERON:0003528!6.40e-20!34;UBERON:0002791!1.29e-19!33;UBERON:0003056!5.01e-19!61;UBERON:0000956!3.16e-16!25;UBERON:0000203!3.16e-16!25;UBERON:0002619!3.66e-15!22;UBERON:0001950!4.08e-14!20;UBERON:0000064!9.14e-12!219;UBERON:0000475!6.80e-11!365;UBERON:0000025!2.85e-10!194;UBERON:0000477!9.54e-10!286;UBERON:0000481!2.96e-08!347;UBERON:0004111!3.05e-08!241;UBERON:0000483!1.04e-07!309;UBERON:0000119!1.23e-07!312;UBERON:0003076!1.33e-07!15;UBERON:0003057!1.33e-07!15;UBERON:0007023!2.50e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.15e-27;32!UBERON:0001893;9.23e-26;34!UBERON:0003528;5.32e-25;34!UBERON:0002020;5.32e-25;34!UBERON:0002791;5.58e-25;32!UBERON:0000956;2.03e-23;25!UBERON:0000203;2.03e-23;25!UBERON:0002780;4.30e-22;41!UBERON:0001890;4.30e-22;41!UBERON:0002619;5.35e-22;22!UBERON:0000073;5.03e-21;53!UBERON:0002616;5.03e-21;53!UBERON:0001950;1.77e-20;20!UBERON:0001017;2.57e-18;75!UBERON:0000955;3.49e-18;68!UBERON:0001016;1.10e-16;83!UBERON:0001737;4.45e-08;9!UBERON:0001557;4.45e-08;9!UBERON:0000200;9.19e-08;6!UBERON:0004733;1.22e-07;12!UBERON:0002028;1.22e-07;12!UBERON:0002420;1.83e-07;9!UBERON:0007245;1.83e-07;9!UBERON:0010009;1.83e-07;9!UBERON:0010011;1.83e-07;9!UBERON:0000454;1.83e-07;9!UBERON:0004732;8.26e-07;13 | |||
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| ||
|short_description=p1@MGAT5B | |short_description=p1@MGAT5B | ||
}} | }} |
Latest revision as of 17:28, 17 September 2015
Short description: | p1@MGAT5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGAT5B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000374998_5end |
EntrezGene: | MGAT5B |
HGNC: | 24140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 8.70e-14 | 59 |
migratory neural crest cell | 1.34e-12 | 41 |
neural cell | 2.01e-11 | 25 |
ectodermal cell | 3.47e-11 | 72 |
melanocyte | 1.82e-09 | 10 |
melanoblast | 1.82e-09 | 10 |
epithelial cell | 5.20e-08 | 253 |
pigment cell | 8.23e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.70e-16 | 143 |
carcinoma | 2.84e-11 | 106 |
cancer | 3.05e-11 | 235 |
disease of cellular proliferation | 1.84e-10 | 239 |