FFCP PHASE1:Hg19::chr17:62084115..62084146,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3384 | |EntrezGene=3384 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5345 | |HGNC=5345 | ||
|TSSclassifier=strong | |||
|UniProt=P13598,Q6FHE2 | |UniProt=P13598,Q6FHE2 | ||
|association_with_transcript=136bp_to_ENST00000449662,NM_000873,uc002jdu.3_5end | |association_with_transcript=136bp_to_ENST00000449662,NM_000873,uc002jdu.3_5end | ||
|cluster_id=chr17:62084115..62084146,- | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_2_at_ICAM2_5end | |description=CAGE_peak_2_at_ICAM2_5end | ||
|id=chr17:62084115..62084146,- | |id=chr17:62084115..62084146,- | ||
|ontology_enrichment_celltype=CL:0002139!7.10e-23!24;CL:0000115!1.67e-21!35;CL:0000071!1.40e-17!18;CL:0002546!1.40e-17!18;CL:0002078!8.91e-17!44;CL:1000413!1.01e-09!9;CL:0000213!1.02e-09!57;CL:0000215!1.02e-09!57;CL:0002544!5.06e-07!6;CL:0002543!7.33e-07!6;CL:0005020!7.61e-07!6;CL:0002138!7.61e-07!6;CL:0005022!7.61e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.10e-23!24;CL:0000115!1.67e-21!35;CL:0000071!1.40e-17!18;CL:0002546!1.40e-17!18;CL:0002078!8.91e-17!44;CL:1000413!1.01e-09!9;CL:0000213!1.02e-09!57;CL:0000215!1.02e-09!57;CL:0002544!5.06e-07!6;CL:0002543!7.33e-07!6;CL:0005020!7.61e-07!6;CL:0002138!7.61e-07!6;CL:0005022!7.61e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.41e-28;24!CL:0000115;4.64e-24;36!CL:0000071;1.44e-21;18!CL:0002078;4.34e-13;45!CL:1000413;9.49e-12;9!CL:0000213;7.63e-09;58!CL:0000215;7.63e-09;58!CL:0002544;2.19e-08;6!CL:0002543;3.47e-08;6!CL:0002138;3.64e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.60e-28,36;CL:0002139,3.45e-28,24;CL:0000071,1.45e-21,18;CL:0002546,1.45e-21,18;CL:0002078,3.53e-20,45;CL:0000213,6.09e-13,58;CL:0000215,6.09e-13,58;CL:1000413,9.53e-12,9;CL:0002544,2.20e-08,6;CL:0002543,3.48e-08,6;CL:0005020,3.65e-08,6;CL:0002138,3.65e-08,6;CL:0005022,3.65e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.44e-21;18!CL:0005022;3.64e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.51e-61!115;UBERON:0000025!2.45e-23!194;UBERON:0004111!5.03e-23!241;UBERON:0001049!1.30e-19!57;UBERON:0005068!1.30e-19!57;UBERON:0006241!1.30e-19!57;UBERON:0007135!1.30e-19!57;UBERON:0000477!1.46e-18!286;UBERON:0001986!1.40e-17!18;UBERON:0004638!1.40e-17!18;UBERON:0004852!1.40e-17!18;UBERON:0001009!2.73e-17!113;UBERON:0003080!1.65e-16!42;UBERON:0002780!7.68e-16!41;UBERON:0001890!7.68e-16!41;UBERON:0006240!7.68e-16!41;UBERON:0002616!9.67e-16!59;UBERON:0004535!1.32e-15!110;UBERON:0003075!3.64e-14!86;UBERON:0007284!3.64e-14!86;UBERON:0000487!8.35e-14!22;UBERON:0002020!1.79e-13!34;UBERON:0003528!1.79e-13!34;UBERON:0001893!2.14e-13!34;UBERON:0002791!6.79e-13!33;UBERON:0000955!7.13e-13!69;UBERON:0006238!7.13e-13!69;UBERON:0002346!1.09e-12!90;UBERON:0001017!1.14e-12!82;UBERON:0001869!1.52e-12!32;UBERON:0006914!4.09e-12!25;UBERON:0000055!4.62e-12!69;UBERON:0005743!4.85e-12!86;UBERON:0004872!1.20e-11!84;UBERON:0002619!2.09e-11!22;UBERON:0000073!5.37e-11!94;UBERON:0001016!5.37e-11!94;UBERON:0001950!1.63e-10!20;UBERON:0003914!5.60e-10!118;UBERON:0000483!9.21e-10!309;UBERON:0003915!1.01e-09!9;UBERON:0004700!1.01e-09!9;UBERON:0001917!1.01e-09!9;UBERON:0000119!2.47e-09!312;UBERON:0000956!3.41e-09!25;UBERON:0000203!3.41e-09!25;UBERON:0001981!4.32e-09!60;UBERON:0007500!4.32e-09!60;UBERON:0004537!4.32e-09!60;UBERON:0006965!4.32e-09!60;UBERON:0002049!4.58e-09!79;UBERON:0007798!4.58e-09!79;UBERON:0003056!1.10e-08!61;UBERON:0003103!3.54e-07!69;UBERON:0002465!8.61e-07!10 | |ontology_enrichment_uberon=UBERON:0007023!4.51e-61!115;UBERON:0000025!2.45e-23!194;UBERON:0004111!5.03e-23!241;UBERON:0001049!1.30e-19!57;UBERON:0005068!1.30e-19!57;UBERON:0006241!1.30e-19!57;UBERON:0007135!1.30e-19!57;UBERON:0000477!1.46e-18!286;UBERON:0001986!1.40e-17!18;UBERON:0004638!1.40e-17!18;UBERON:0004852!1.40e-17!18;UBERON:0001009!2.73e-17!113;UBERON:0003080!1.65e-16!42;UBERON:0002780!7.68e-16!41;UBERON:0001890!7.68e-16!41;UBERON:0006240!7.68e-16!41;UBERON:0002616!9.67e-16!59;UBERON:0004535!1.32e-15!110;UBERON:0003075!3.64e-14!86;UBERON:0007284!3.64e-14!86;UBERON:0000487!8.35e-14!22;UBERON:0002020!1.79e-13!34;UBERON:0003528!1.79e-13!34;UBERON:0001893!2.14e-13!34;UBERON:0002791!6.79e-13!33;UBERON:0000955!7.13e-13!69;UBERON:0006238!7.13e-13!69;UBERON:0002346!1.09e-12!90;UBERON:0001017!1.14e-12!82;UBERON:0001869!1.52e-12!32;UBERON:0006914!4.09e-12!25;UBERON:0000055!4.62e-12!69;UBERON:0005743!4.85e-12!86;UBERON:0004872!1.20e-11!84;UBERON:0002619!2.09e-11!22;UBERON:0000073!5.37e-11!94;UBERON:0001016!5.37e-11!94;UBERON:0001950!1.63e-10!20;UBERON:0003914!5.60e-10!118;UBERON:0000483!9.21e-10!309;UBERON:0003915!1.01e-09!9;UBERON:0004700!1.01e-09!9;UBERON:0001917!1.01e-09!9;UBERON:0000119!2.47e-09!312;UBERON:0000956!3.41e-09!25;UBERON:0000203!3.41e-09!25;UBERON:0001981!4.32e-09!60;UBERON:0007500!4.32e-09!60;UBERON:0004537!4.32e-09!60;UBERON:0006965!4.32e-09!60;UBERON:0002049!4.58e-09!79;UBERON:0007798!4.58e-09!79;UBERON:0003056!1.10e-08!61;UBERON:0003103!3.54e-07!69;UBERON:0002465!8.61e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.44e-21;18!UBERON:0001986;1.44e-21;18!UBERON:0004852;1.44e-21;18!UBERON:0007023;1.68e-17;114!UBERON:0000487;2.87e-16;22!UBERON:0001893;9.68e-14;34!UBERON:0006914;1.90e-13;25!UBERON:0003528;2.32e-13;34!UBERON:0002020;2.32e-13;34!UBERON:0001869;3.77e-13;32!UBERON:0002791;4.92e-13;32!UBERON:0002780;5.19e-13;41!UBERON:0001890;5.19e-13;41!UBERON:0002619;1.36e-12;22!UBERON:0000073;3.15e-12;53!UBERON:0002616;3.15e-12;53!UBERON:0003915;9.49e-12;9!UBERON:0004700;9.49e-12;9!UBERON:0001917;9.49e-12;9!UBERON:0001950;1.82e-11;20!UBERON:0000956;2.06e-10;25!UBERON:0000203;2.06e-10;25!UBERON:0000490;5.06e-08;33!UBERON:0000125;4.90e-07;9!UBERON:0002308;4.90e-07;9!UBERON:0002465;5.49e-07;10!UBERON:0000178;7.30e-07;15!UBERON:0000179;7.30e-07;15!UBERON:0000463;7.30e-07;15 | |||
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| ||
|short_description=p2@ICAM2 | |short_description=p2@ICAM2 | ||
}} | }} |
Latest revision as of 19:02, 16 September 2015
Short description: | p2@ICAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ICAM2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 136bp_to_ENST00000449662, NM_000873, uc002jdu.3_5end |
EntrezGene: | ICAM2 |
HGNC: | 5345 |
UniProt: | P13598Q6FHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.60e-28 | 36 |
endothelial cell of vascular tree | 3.45e-28 | 24 |
blood vessel endothelial cell | 1.45e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.45e-21 | 18 |
meso-epithelial cell | 3.53e-20 | 45 |
lining cell | 6.09e-13 | 58 |
barrier cell | 6.09e-13 | 58 |
endothelial cell of artery | 9.53e-12 | 9 |
aortic endothelial cell | 2.20e-08 | 6 |
vein endothelial cell | 3.48e-08 | 6 |
lymphangioblast | 3.65e-08 | 6 |
endothelial cell of lymphatic vessel | 3.65e-08 | 6 |
vascular lymphangioblast | 3.65e-08 | 6 |