FFCP PHASE1:Hg19::chr18:53178179..53178191,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:53178179..53178191,-
|short_description=p53@TCF4
|description=CAGE_peak_53_at_TCF4_5end
|association_with_transcript=-179bp_to_ENST00000543082,NM_00124323...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUC0 | |UniProt=B3KUC0 | ||
|association_with_transcript=-179bp_to_ENST00000543082,NM_001243231,uc002lfy.2_5end | |||
|cluster_id=chr18:53178179..53178191,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_53_at_TCF4_5end | |||
|id=chr18:53178179..53178191,- | |||
|ontology_enrichment_celltype=CL:0002057!1.99e-54!42;CL:0000860!5.18e-50!45;CL:0002194!5.54e-38!63;CL:0000576!5.54e-38!63;CL:0000040!5.54e-38!63;CL:0000559!5.54e-38!63;CL:0002087!1.42e-36!119;CL:0002009!1.85e-36!65;CL:0000766!3.82e-33!76;CL:0000839!4.99e-33!70;CL:0000557!2.12e-32!71;CL:0000738!1.93e-31!140;CL:0002031!1.18e-29!124;CL:0000037!3.85e-27!172;CL:0000566!3.85e-27!172;CL:0000988!1.03e-24!182;CL:0002032!7.95e-24!165;CL:0000837!7.95e-24!165;CL:0000763!3.47e-22!112;CL:0000049!3.47e-22!112;CL:0000134!2.78e-15!358;CL:0002320!1.33e-14!365;CL:0000219!3.14e-12!390;CL:0000034!2.55e-11!444;CL:0000236!1.25e-10!14;CL:0000048!1.86e-10!430;CL:0000723!4.83e-10!436;CL:0002393!5.68e-08!9;CL:0002397!5.68e-08!9;CL:0000945!6.19e-08!24;CL:0000826!6.19e-08!24;CL:0000842!3.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.24e-61;33!CL:0002057;6.24e-61;33!CL:0000473;3.73e-44;39!CL:0000234;3.73e-44;39!CL:0000576;4.64e-35;48!CL:0000766;1.06e-21;69!CL:0002087;7.26e-18;104!CL:0000226;3.01e-10;3!CL:0000842;3.01e-10;3!CL:0000738;3.30e-09;136!CL:0000236;9.00e-09;13!CL:0000037;1.42e-08;1!CL:0001024;1.42e-08;1!CL:0000763;2.32e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.10e-65,42;CL:0002057,5.10e-65,42;CL:0000473,1.93e-56,48;CL:0000234,1.93e-56,48;CL:0002194,2.01e-44,59;CL:0000576,2.01e-44,59;CL:0000040,2.01e-44,59;CL:0000559,2.01e-44,59;CL:0002009,7.16e-43,61;CL:0000839,2.13e-39,66;CL:0000557,9.18e-39,67;CL:0002087,2.09e-37,115;CL:0000766,7.43e-36,72;CL:0000738,5.10e-31,136;CL:0002031,5.46e-30,120;CL:0000037,1.51e-26,168;CL:0000988,5.53e-25,177;CL:0000763,8.89e-23,108;CL:0000049,8.89e-23,108;CL:0002032,2.48e-21,161;CL:0000837,2.48e-21,161;CL:0000134,2.89e-10,354;CL:0000226,3.31e-10,3;CL:0000842,3.31e-10,3;CL:0002320,5.63e-10,361;CL:0000219,5.89e-09,386;CL:0001024,1.48e-08,1;CL:0000034,3.28e-08,441;CL:0000236,3.87e-08,14;CL:0000048,1.05e-07,427;CL:0000723,1.56e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-43;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.36e-33!80;UBERON:0002390!6.67e-32!102;UBERON:0003061!6.67e-32!102;UBERON:0001474!1.19e-29!86;UBERON:0002193!3.39e-29!112;UBERON:0002405!9.38e-28!115;UBERON:0004765!2.00e-23!101;UBERON:0001434!2.00e-23!101;UBERON:0002384!2.54e-14!375;UBERON:0003081!1.08e-12!216;UBERON:0002204!2.60e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-37,76;UBERON:0001474,1.63e-34,82;UBERON:0002390,2.28e-34,98;UBERON:0003061,2.28e-34,98;UBERON:0004765,3.85e-31,90;UBERON:0002193,7.66e-31,108;UBERON:0002405,5.04e-30,93;UBERON:0001434,1.13e-27,100;UBERON:0002204,4.54e-15,167;UBERON:0003081,1.54e-14,203;UBERON:0002384,1.40e-09,371;UBERON:0000926,7.30e-08,315;UBERON:0004120,7.30e-08,315;UBERON:0006603,7.30e-08,315 | |||
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| ||
|short_description=p53@TCF4 | |||
}} | }} |
Latest revision as of 21:15, 19 September 2015
Short description: | p53@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_53_at_TCF4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -179bp_to_ENST00000543082, NM_001243231, uc002lfy.2_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B3KUC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-37 | 76 |
bone element | 1.63e-34 | 82 |
hematopoietic system | 2.28e-34 | 98 |
blood island | 2.28e-34 | 98 |
skeletal element | 3.85e-31 | 90 |
hemolymphoid system | 7.66e-31 | 108 |
immune system | 5.04e-30 | 93 |
skeletal system | 1.13e-27 | 100 |
musculoskeletal system | 4.54e-15 | 167 |
lateral plate mesoderm | 1.54e-14 | 203 |
connective tissue | 1.40e-09 | 371 |
mesoderm | 7.30e-08 | 315 |
mesoderm-derived structure | 7.30e-08 | 315 |
presumptive mesoderm | 7.30e-08 | 315 |