FFCP PHASE1:Hg19::chr18:52989447..52989460,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:52989447..52989460,-
|short_description=p50@TCF4
|description=CAGE_peak_50_at_TCF4_5end
|association_with_transcript=-357bp_to_NM_001243234,NM_001243235_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=G0LNU9,P15884,G0LNV0 | |UniProt=G0LNU9,P15884,G0LNV0 | ||
|association_with_transcript=-357bp_to_NM_001243234,NM_001243235_5end | |||
|cluster_id=chr18:52989447..52989460,- | |||
|description=CAGE_peak_50_at_TCF4_5end | |||
|id=chr18:52989447..52989460,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.94e-20;5!CL:0000540;6.26e-08;6!CL:0000404;6.26e-08;6!CL:0002321;5.52e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.49e-12,8;CL:0000540,5.55e-08,6;CL:0000031,5.55e-08,6;CL:0000404,5.55e-08,6;CL:0000133,7.35e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;6.26e-08;6 | |||
|ontology_enrichment_disease=DOID:171!5.41e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.12e-16;6!DOID:171;3.11e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.18e-16,6;DOID:171,3.21e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.07e-21!94;UBERON:0001016!3.07e-21!94;UBERON:0001017!5.02e-19!82;UBERON:0005743!7.97e-19!86;UBERON:0007023!6.63e-18!115;UBERON:0002346!5.52e-17!90;UBERON:0000924!1.13e-16!173;UBERON:0006601!1.13e-16!173;UBERON:0001049!1.63e-15!57;UBERON:0005068!1.63e-15!57;UBERON:0006241!1.63e-15!57;UBERON:0007135!1.63e-15!57;UBERON:0003075!5.18e-15!86;UBERON:0007284!5.18e-15!86;UBERON:0004121!5.26e-15!169;UBERON:0002616!1.62e-13!59;UBERON:0000955!2.90e-13!69;UBERON:0006238!2.90e-13!69;UBERON:0002780!3.39e-13!41;UBERON:0001890!3.39e-13!41;UBERON:0006240!3.39e-13!41;UBERON:0003080!9.57e-13!42;UBERON:0000153!2.47e-11!129;UBERON:0007811!2.47e-11!129;UBERON:0003056!9.85e-10!61;UBERON:0000033!2.02e-09!123;UBERON:0001894!5.74e-09!7;UBERON:0006222!5.74e-09!7;UBERON:0003296!2.21e-08!4;UBERON:0010133!2.21e-08!4;UBERON:0001893!7.90e-08!34;UBERON:0001869!2.19e-07!32;UBERON:0002791!3.60e-07!33;UBERON:0002020!8.12e-07!34;UBERON:0003528!8.12e-07!34;UBERON:0000013!8.32e-07!5;UBERON:0002410!8.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.14e-22;2!UBERON:0002757;4.14e-22;2!UBERON:0010134;4.14e-22;2!UBERON:0005408;4.14e-22;2!UBERON:0001899;4.14e-22;2!UBERON:0000013;6.94e-20;5!UBERON:0002410;6.94e-20;5!UBERON:0005795;1.13e-11;1!UBERON:0003296;1.51e-11;4!UBERON:0010133;1.51e-11;4!UBERON:0002784;1.51e-11;4!UBERON:0000010;2.60e-11;8!UBERON:0001894;5.76e-07;7!UBERON:0001954;9.96e-07;2!UBERON:0003022;9.96e-07;2!UBERON:0002421;9.96e-07;2!UBERON:0002600;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.41e-22,2;UBERON:0002757,5.41e-22,2;UBERON:0010134,5.41e-22,2;UBERON:0005408,5.41e-22,2;UBERON:0001899,5.41e-22,2;UBERON:0000013,7.41e-20,5;UBERON:0002410,7.41e-20,5;UBERON:0001016,2.60e-12,89;UBERON:0003296,1.73e-11,4;UBERON:0010133,1.73e-11,4;UBERON:0002784,1.73e-11,4;UBERON:0000010,2.69e-11,8;UBERON:0004121,2.82e-08,171;UBERON:0000924,2.82e-08,171;UBERON:0006601,2.82e-08,171;UBERON:0001017,3.42e-07,81;UBERON:0001894,6.20e-07,7;UBERON:0006222,6.20e-07,7 | |||
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| ||
|short_description=p50@TCF4 | |||
}} | }} |
Latest revision as of 20:41, 19 September 2015
Short description: | p50@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -357bp_to_NM_001243234, NM_001243235_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNU9P15884G0LNV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.49e-12 | 8 |
neuron | 5.55e-08 | 6 |
neuroblast | 5.55e-08 | 6 |
electrically signaling cell | 5.55e-08 | 6 |
neurectodermal cell | 7.35e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.41e-22 | 2 |
regional part of epithalamus | 5.41e-22 | 2 |
secretory circumventricular organ | 5.41e-22 | 2 |
circumventricular organ | 5.41e-22 | 2 |
epithalamus | 5.41e-22 | 2 |
sympathetic nervous system | 7.41e-20 | 5 |
autonomic nervous system | 7.41e-20 | 5 |
nervous system | 2.60e-12 | 89 |
gland of diencephalon | 1.73e-11 | 4 |
neuroendocrine gland | 1.73e-11 | 4 |
regional part of diencephalon | 1.73e-11 | 4 |
peripheral nervous system | 2.69e-11 | 8 |
ectoderm-derived structure | 2.82e-08 | 171 |
ectoderm | 2.82e-08 | 171 |
presumptive ectoderm | 2.82e-08 | 171 |
central nervous system | 3.42e-07 | 81 |
diencephalon | 6.20e-07 | 7 |
future diencephalon | 6.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.18e-16 | 6 |
neuroectodermal tumor | 3.21e-10 | 10 |