FFCP PHASE1:Hg19::chr18:52969674..52969685,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:52969674..52969685,-
|short_description=p24@TCF4
|description=CAGE_peak_24_at_TCF4_5end
|association_with_transcript=29bp_to_FR748222_5end
|EntrezGene=69...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=G0LNV1 | |UniProt=G0LNV1 | ||
|association_with_transcript=29bp_to_FR748222_5end | |||
|cluster_id=chr18:52969674..52969685,- | |||
|description=CAGE_peak_24_at_TCF4_5end | |||
|id=chr18:52969674..52969685,- | |||
|ontology_enrichment_celltype=CL:0002620!4.87e-25!23;CL:0000057!3.19e-19!75;CL:0002551!1.43e-08!6;CL:0000055!8.85e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.17e-35;23!CL:0000057;4.31e-13;73!CL:0002551;3.30e-09;6!CL:0002556;1.33e-08;6!CL:0002367;7.84e-08;2!CL:0002363;6.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.90e-35,23;CL:0000057,3.38e-33,76;CL:0002551,3.60e-09,6;CL:0002556,1.42e-08,6;CL:0002367,7.62e-08,2;CL:0002363,9.17e-07,2;CL:0000008,9.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.38e-07;2 | |||
|ontology_enrichment_disease=DOID:17!2.60e-07!5;DOID:450!2.60e-07!5;DOID:66!2.60e-07!5;DOID:423!2.60e-07!5;DOID:0080000!2.60e-07!5;DOID:11722!2.60e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.01e-10;5!DOID:450;3.01e-10;5!DOID:66;3.01e-10;5!DOID:423;3.01e-10;5!DOID:0080000;3.01e-10;5!DOID:11722;3.01e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.71e-10,5;DOID:450,1.71e-10,5;DOID:66,1.71e-10,5;DOID:423,1.71e-10,5;DOID:0080000,1.71e-10,5;DOID:11722,1.71e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.42e-17!40;UBERON:0002199!9.16e-17!45;UBERON:0002416!9.16e-17!45;UBERON:0003102!1.34e-16!95;UBERON:0002619!4.45e-15!22;UBERON:0000475!5.51e-14!365;UBERON:0001049!6.29e-14!57;UBERON:0005068!6.29e-14!57;UBERON:0006241!6.29e-14!57;UBERON:0007135!6.29e-14!57;UBERON:0000956!6.35e-14!25;UBERON:0000203!6.35e-14!25;UBERON:0001950!2.28e-13!20;UBERON:0001869!3.74e-13!32;UBERON:0001893!3.95e-13!34;UBERON:0003075!5.44e-13!86;UBERON:0007284!5.44e-13!86;UBERON:0002780!6.26e-13!41;UBERON:0001890!6.26e-13!41;UBERON:0006240!6.26e-13!41;UBERON:0002346!1.08e-12!90;UBERON:0003056!1.62e-12!61;UBERON:0002791!1.79e-12!33;UBERON:0003080!1.93e-12!42;UBERON:0000153!2.18e-12!129;UBERON:0007811!2.18e-12!129;UBERON:0000033!1.13e-11!123;UBERON:0002616!2.09e-11!59;UBERON:0000073!2.23e-11!94;UBERON:0001016!2.23e-11!94;UBERON:0004121!2.77e-11!169;UBERON:0000924!3.22e-11!173;UBERON:0006601!3.22e-11!173;UBERON:0002020!7.53e-11!34;UBERON:0003528!7.53e-11!34;UBERON:0001017!3.63e-10!82;UBERON:0005743!6.85e-10!86;UBERON:0002067!2.03e-09!9;UBERON:0004016!2.03e-09!9;UBERON:0010083!2.03e-09!9;UBERON:0000955!5.20e-09!69;UBERON:0006238!5.20e-09!69;UBERON:0007023!1.17e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.23e-18;41!UBERON:0003102;3.89e-18;50!UBERON:0002199;1.39e-17;46!UBERON:0002416;1.39e-17;46!UBERON:0002067;1.93e-12;9!UBERON:0001758;1.33e-08;6!UBERON:0003672;1.33e-08;6!UBERON:0005969;7.84e-08;2!UBERON:0003956;7.84e-08;2!UBERON:0003129;2.29e-07;7!UBERON:0003566;6.38e-07;2!UBERON:0001777;6.38e-07;2!UBERON:0011137;6.57e-07;11!UBERON:0010323;6.57e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.72e-27,99;UBERON:0002199,5.74e-27,46;UBERON:0002416,5.74e-27,46;UBERON:0002097,1.88e-25,41;UBERON:0002067,1.95e-12,9;UBERON:0004016,1.95e-12,9;UBERON:0010083,1.95e-12,9;UBERON:0001758,1.42e-08,6;UBERON:0003672,1.42e-08,6;UBERON:0005969,7.62e-08,2;UBERON:0003956,7.62e-08,2;UBERON:0001444,1.09e-07,49;UBERON:0003129,2.41e-07,7;UBERON:0000165,6.09e-07,29;UBERON:0000930,6.09e-07,29;UBERON:0010323,6.77e-07,11;UBERON:0003566,9.17e-07,2;UBERON:0001777,9.17e-07,2 | |||
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| ||
|short_description=p24@TCF4 | |||
}} | }} |
Latest revision as of 20:34, 19 September 2015
Short description: | p24@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_FR748222_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.90e-35 | 23 |
fibroblast | 3.38e-33 | 76 |
fibroblast of dermis | 3.60e-09 | 6 |
fibroblast of periodontium | 1.42e-08 | 6 |
trabecular meshwork cell | 7.62e-08 | 2 |
keratocyte | 9.17e-07 | 2 |
migratory cranial neural crest cell | 9.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.72e-27 | 99 |
integument | 5.74e-27 | 46 |
integumental system | 5.74e-27 | 46 |
skin of body | 1.88e-25 | 41 |
dermis | 1.95e-12 | 9 |
dermatome | 1.95e-12 | 9 |
future dermis | 1.95e-12 | 9 |
periodontium | 1.42e-08 | 6 |
dentition | 1.42e-08 | 6 |
reticulum trabeculare | 7.62e-08 | 2 |
aqueous drainage system | 7.62e-08 | 2 |
subdivision of head | 1.09e-07 | 49 |
skull | 2.41e-07 | 7 |
mouth | 6.09e-07 | 29 |
stomodeum | 6.09e-07 | 29 |
cranial skeletal system | 6.77e-07 | 11 |
head connective tissue | 9.17e-07 | 2 |
substantia propria of cornea | 9.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.71e-10 | 5 |
myotonic disease | 1.71e-10 | 5 |
muscle tissue disease | 1.71e-10 | 5 |
myopathy | 1.71e-10 | 5 |
muscular disease | 1.71e-10 | 5 |
myotonic dystrophy | 1.71e-10 | 5 |