FFCP PHASE1:Hg19::chr17:43307405..43307415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:43307405..43307415,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr17:43307405..43307415,+ | |description=CAGE_peak_at_chr17:43307405..43307415,+ | ||
|id=chr17:43307405..43307415,+ | |id=chr17:43307405..43307415,+ | ||
|ontology_enrichment_celltype=CL:0000990!7.32e-32!8;CL:0000453!2.12e-30!5;CL:0000451!6.35e-26!10;CL:0000763!6.37e-23!112;CL:0000049!6.37e-23!112;CL:0002009!5.03e-22!65;CL:0000738!2.75e-21!140;CL:0000766!7.29e-21!76;CL:0000988!3.19e-20!182;CL:0000557!6.82e-20!71;CL:0002194!2.47e-17!63;CL:0000576!2.47e-17!63;CL:0000040!2.47e-17!63;CL:0000559!2.47e-17!63;CL:0002032!2.60e-17!165;CL:0000837!2.60e-17!165;CL:0000037!2.10e-16!172;CL:0000566!2.10e-16!172;CL:0000860!2.81e-16!45;CL:0000840!3.85e-16!5;CL:0001029!3.85e-16!5;CL:0000839!2.53e-15!70;CL:0002057!9.67e-15!42;CL:0001014!2.55e-13!2;CL:0001016!2.55e-13!2;CL:0002031!5.21e-13!124;CL:0002087!1.44e-10!119;CL:0000080!4.57e-10!6;CL:0000081!3.65e-09!11;CL:0000775!4.08e-09!3;CL:0000094!1.88e-07!8 | |ontology_enrichment_celltype=CL:0000990!7.32e-32!8;CL:0000453!2.12e-30!5;CL:0000451!6.35e-26!10;CL:0000763!6.37e-23!112;CL:0000049!6.37e-23!112;CL:0002009!5.03e-22!65;CL:0000738!2.75e-21!140;CL:0000766!7.29e-21!76;CL:0000988!3.19e-20!182;CL:0000557!6.82e-20!71;CL:0002194!2.47e-17!63;CL:0000576!2.47e-17!63;CL:0000040!2.47e-17!63;CL:0000559!2.47e-17!63;CL:0002032!2.60e-17!165;CL:0000837!2.60e-17!165;CL:0000037!2.10e-16!172;CL:0000566!2.10e-16!172;CL:0000860!2.81e-16!45;CL:0000840!3.85e-16!5;CL:0001029!3.85e-16!5;CL:0000839!2.53e-15!70;CL:0002057!9.67e-15!42;CL:0001014!2.55e-13!2;CL:0001016!2.55e-13!2;CL:0002031!5.21e-13!124;CL:0002087!1.44e-10!119;CL:0000080!4.57e-10!6;CL:0000081!3.65e-09!11;CL:0000775!4.08e-09!3;CL:0000094!1.88e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000081;1.28e-23;11!CL:0000771;2.55e-15;2!CL:0000094;5.41e-15;8!CL:0000775;1.14e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,1.33e-23,11;CL:0000771,2.74e-15,2;CL:0000094,5.41e-15,8;CL:0000775,1.09e-10,3;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.12e-07!1;DOID:0060061!1.12e-07!1;DOID:8691!1.12e-07!1 | |ontology_enrichment_disease=DOID:0060060!1.12e-07!1;DOID:0060061!1.12e-07!1;DOID:8691!1.12e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.33e-29;1!DOID:0060061;1.33e-29;1!DOID:8691;1.33e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.33e-29,1;DOID:0060061,1.33e-29,1;DOID:8691,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.65e-21!102;UBERON:0003061!7.65e-21!102;UBERON:0002193!1.31e-18!112;UBERON:0002371!2.74e-17!80;UBERON:0001474!7.50e-16!86;UBERON:0004765!5.30e-13!101;UBERON:0001434!5.30e-13!101;UBERON:0002405!1.68e-12!115;UBERON:0003081!1.34e-08!216;UBERON:0002204!1.37e-08!167;UBERON:0001882!7.40e-07!1;UBERON:0005403!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0002390!7.65e-21!102;UBERON:0003061!7.65e-21!102;UBERON:0002193!1.31e-18!112;UBERON:0002371!2.74e-17!80;UBERON:0001474!7.50e-16!86;UBERON:0004765!5.30e-13!101;UBERON:0001434!5.30e-13!101;UBERON:0002405!1.68e-12!115;UBERON:0003081!1.34e-08!216;UBERON:0002204!1.37e-08!167;UBERON:0001882!7.40e-07!1;UBERON:0005403!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.91e-26;10!UBERON:0000178;8.52e-18;15!UBERON:0000179;8.52e-18;15!UBERON:0000463;8.52e-18;15!UBERON:0000478;2.07e-11;24!UBERON:0002390;8.22e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.03e-26,10;UBERON:0000358,3.03e-26,10;UBERON:0000307,3.03e-26,10;UBERON:0000091,3.03e-26,10;UBERON:0000087,3.03e-26,10;UBERON:0007010,3.03e-26,10;UBERON:0007806,3.03e-26,10;UBERON:0008780,3.03e-26,10;UBERON:0005728,3.03e-26,10;UBERON:0000178,8.77e-18,15;UBERON:0000179,8.77e-18,15;UBERON:0000463,8.77e-18,15;UBERON:0000478,2.11e-11,24 | |||
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|short_description=p@chr17:43307405..43307415,+ | |short_description=p@chr17:43307405..43307415,+ | ||
}} | }} |
Latest revision as of 17:44, 25 July 2015
Short description: | p@chr17:43307405..43307415, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:43307405..43307415, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 1.33e-23 | 11 |
eosinophil | 2.74e-15 | 2 |
granulocyte | 5.41e-15 | 8 |
neutrophil | 1.09e-10 | 3 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.03e-26 | 10 |
blastocyst | 3.03e-26 | 10 |
blastula | 3.03e-26 | 10 |
bilaminar disc | 3.03e-26 | 10 |
inner cell mass | 3.03e-26 | 10 |
cleaving embryo | 3.03e-26 | 10 |
connecting stalk | 3.03e-26 | 10 |
inner cell mass derived epiblast | 3.03e-26 | 10 |
extraembryonic mesoderm | 3.03e-26 | 10 |
blood | 8.77e-18 | 15 |
haemolymphatic fluid | 8.77e-18 | 15 |
organism substance | 8.77e-18 | 15 |
extraembryonic structure | 2.11e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.33e-29 | 1 |
cutaneous T cell lymphoma | 1.33e-29 | 1 |
mycosis fungoides | 1.33e-29 | 1 |