FFCP PHASE1:Hg19::chr17:42984179..42984190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-308bp_to_U92979_5end | |association_with_transcript=-308bp_to_U92979_5end | ||
|cluster_id=chr17:42984179..42984190,- | |||
|coexpression_cluster_id=C162 | |coexpression_cluster_id=C162 | ||
|description=CAGE_peak_34_at_GFAP_5end | |description=CAGE_peak_34_at_GFAP_5end | ||
|id=chr17:42984179..42984190,- | |id=chr17:42984179..42984190,- | ||
|ontology_enrichment_celltype=CL:0002605!1.12e-12!3;CL:0000128!3.67e-09!7;CL:0000126!3.67e-09!7;CL:0000127!3.67e-09!7;CL:0002453!3.67e-09!7 | |ontology_enrichment_celltype=CL:0002605!1.12e-12!3;CL:0000128!3.67e-09!7;CL:0000126!3.67e-09!7;CL:0000127!3.67e-09!7;CL:0002453!3.67e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.58e-22;3!CL:0000128;6.81e-10;7!CL:0000126;6.81e-10;7!CL:0000127;6.81e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.89e-22,3;CL:0000128,8.08e-10,7;CL:0000126,8.08e-10,7;CL:0000127,8.08e-10,7;CL:0002453,8.08e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.67e-11;3!UBERON:0003057;2.67e-11;3!UBERON:0006601;4.56e-11;82!UBERON:0006222;5.70e-09;1!UBERON:0005425;1.37e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.58e-100!57;UBERON:0005068!4.58e-100!57;UBERON:0006241!4.58e-100!57;UBERON:0007135!4.58e-100!57;UBERON:0001017!2.36e-90!82;UBERON:0005743!8.25e-86!86;UBERON:0002616!3.69e-81!59;UBERON:0000073!9.42e-81!94;UBERON:0001016!9.42e-81!94;UBERON:0000955!8.18e-80!69;UBERON:0006238!8.18e-80!69;UBERON:0003075!3.46e-67!86;UBERON:0007284!3.46e-67!86;UBERON:0002346!7.88e-64!90;UBERON:0002780!4.18e-61!41;UBERON:0001890!4.18e-61!41;UBERON:0006240!4.18e-61!41;UBERON:0003080!1.58e-59!42;UBERON:0002020!1.62e-58!34;UBERON:0003528!1.62e-58!34;UBERON:0001893!6.28e-58!34;UBERON:0002791!8.34e-55!33;UBERON:0001869!3.13e-51!32;UBERON:0007023!4.99e-46!115;UBERON:0000033!7.32e-44!123;UBERON:0003076!1.56e-42!15;UBERON:0003057!1.56e-42!15;UBERON:0000153!1.98e-41!129;UBERON:0007811!1.98e-41!129;UBERON:0004121!2.77e-41!169;UBERON:0000924!4.01e-40!173;UBERON:0006601!4.01e-40!173;UBERON:0003056!3.32e-39!61;UBERON:0000956!8.70e-39!25;UBERON:0000203!8.70e-39!25;UBERON:0004732!5.90e-35!13;UBERON:0004733!2.32e-31!12;UBERON:0002028!2.32e-31!12;UBERON:0007277!2.32e-31!12;UBERON:0002619!1.95e-29!22;UBERON:0001950!1.18e-27!20;UBERON:0002298!1.98e-24!8;UBERON:0000025!2.33e-23!194;UBERON:0002308!2.46e-21!9;UBERON:0000125!2.46e-21!9;UBERON:0002680!1.51e-20!9;UBERON:0001895!1.51e-20!9;UBERON:0010092!1.51e-20!9;UBERON:0004111!4.72e-17!241;UBERON:0000200!6.23e-16!6;UBERON:0002420!1.36e-15!9;UBERON:0007245!1.36e-15!9;UBERON:0010009!1.36e-15!9;UBERON:0010011!1.36e-15!9;UBERON:0000454!1.36e-15!9;UBERON:0009663!3.83e-14!7;UBERON:0000477!6.05e-14!286;UBERON:0006331!2.14e-13!3;UBERON:0002240!3.49e-13!3;UBERON:0001896!4.45e-13!3;UBERON:0005290!4.45e-13!3;UBERON:0010096!4.45e-13!3;UBERON:0000988!6.39e-13!3;UBERON:0002771!1.42e-12!3;UBERON:0000064!1.62e-12!219;UBERON:0001871!3.26e-12!7;UBERON:0000483!3.32e-12!309;UBERON:0000119!5.32e-12!312;UBERON:0000475!2.61e-11!365;UBERON:0002037!2.15e-10!6;UBERON:0006215!2.15e-10!6;UBERON:0002148!1.47e-09!2;UBERON:0009662!1.47e-09!2;UBERON:0000369!3.06e-09!4;UBERON:0002435!3.06e-09!4;UBERON:0000204!3.06e-09!4;UBERON:0010082!3.06e-09!4;UBERON:0005162!5.19e-09!2;UBERON:0000122!5.19e-09!2;UBERON:0005174!4.54e-08!5;UBERON:0001137!4.54e-08!5;UBERON:0000349!7.44e-08!5;UBERON:0000062!1.11e-07!511;UBERON:0002021!1.66e-07!5;UBERON:0001872!3.98e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!4.58e-100!57;UBERON:0005068!4.58e-100!57;UBERON:0006241!4.58e-100!57;UBERON:0007135!4.58e-100!57;UBERON:0001017!2.36e-90!82;UBERON:0005743!8.25e-86!86;UBERON:0002616!3.69e-81!59;UBERON:0000073!9.42e-81!94;UBERON:0001016!9.42e-81!94;UBERON:0000955!8.18e-80!69;UBERON:0006238!8.18e-80!69;UBERON:0003075!3.46e-67!86;UBERON:0007284!3.46e-67!86;UBERON:0002346!7.88e-64!90;UBERON:0002780!4.18e-61!41;UBERON:0001890!4.18e-61!41;UBERON:0006240!4.18e-61!41;UBERON:0003080!1.58e-59!42;UBERON:0002020!1.62e-58!34;UBERON:0003528!1.62e-58!34;UBERON:0001893!6.28e-58!34;UBERON:0002791!8.34e-55!33;UBERON:0001869!3.13e-51!32;UBERON:0007023!4.99e-46!115;UBERON:0000033!7.32e-44!123;UBERON:0003076!1.56e-42!15;UBERON:0003057!1.56e-42!15;UBERON:0000153!1.98e-41!129;UBERON:0007811!1.98e-41!129;UBERON:0004121!2.77e-41!169;UBERON:0000924!4.01e-40!173;UBERON:0006601!4.01e-40!173;UBERON:0003056!3.32e-39!61;UBERON:0000956!8.70e-39!25;UBERON:0000203!8.70e-39!25;UBERON:0004732!5.90e-35!13;UBERON:0004733!2.32e-31!12;UBERON:0002028!2.32e-31!12;UBERON:0007277!2.32e-31!12;UBERON:0002619!1.95e-29!22;UBERON:0001950!1.18e-27!20;UBERON:0002298!1.98e-24!8;UBERON:0000025!2.33e-23!194;UBERON:0002308!2.46e-21!9;UBERON:0000125!2.46e-21!9;UBERON:0002680!1.51e-20!9;UBERON:0001895!1.51e-20!9;UBERON:0010092!1.51e-20!9;UBERON:0004111!4.72e-17!241;UBERON:0000200!6.23e-16!6;UBERON:0002420!1.36e-15!9;UBERON:0007245!1.36e-15!9;UBERON:0010009!1.36e-15!9;UBERON:0010011!1.36e-15!9;UBERON:0000454!1.36e-15!9;UBERON:0009663!3.83e-14!7;UBERON:0000477!6.05e-14!286;UBERON:0006331!2.14e-13!3;UBERON:0002240!3.49e-13!3;UBERON:0001896!4.45e-13!3;UBERON:0005290!4.45e-13!3;UBERON:0010096!4.45e-13!3;UBERON:0000988!6.39e-13!3;UBERON:0002771!1.42e-12!3;UBERON:0000064!1.62e-12!219;UBERON:0001871!3.26e-12!7;UBERON:0000483!3.32e-12!309;UBERON:0000119!5.32e-12!312;UBERON:0000475!2.61e-11!365;UBERON:0002037!2.15e-10!6;UBERON:0006215!2.15e-10!6;UBERON:0002148!1.47e-09!2;UBERON:0009662!1.47e-09!2;UBERON:0000369!3.06e-09!4;UBERON:0002435!3.06e-09!4;UBERON:0000204!3.06e-09!4;UBERON:0010082!3.06e-09!4;UBERON:0005162!5.19e-09!2;UBERON:0000122!5.19e-09!2;UBERON:0005174!4.54e-08!5;UBERON:0001137!4.54e-08!5;UBERON:0000349!7.44e-08!5;UBERON:0000062!1.11e-07!511;UBERON:0002021!1.66e-07!5;UBERON:0001872!3.98e-07!5 | ||
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|short_description=p34@GFAP | |short_description=p34@GFAP | ||
}} | }} |
Latest revision as of 23:19, 24 September 2015
Short description: | p34@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_GFAP_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -308bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.89e-22 | 3 |
oligodendrocyte | 8.08e-10 | 7 |
macroglial cell | 8.08e-10 | 7 |
astrocyte | 8.08e-10 | 7 |
oligodendrocyte precursor cell | 8.08e-10 | 7 |