FFCP PHASE1:Hg19::chr17:42015654..42015659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:42015654..42015659,+ | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_at_chr17:42015654..42015659,+ | |description=CAGE_peak_at_chr17:42015654..42015659,+ | ||
|id=chr17:42015654..42015659,+ | |id=chr17:42015654..42015659,+ | ||
|ontology_enrichment_celltype=CL:0002535!9.31e-12!2;CL:0002322!6.35e-10!5;CL:0000784!3.08e-08!3 | |ontology_enrichment_celltype=CL:0002535!9.31e-12!2;CL:0002322!6.35e-10!5;CL:0000784!3.08e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.57e-32;5!CL:0002535;5.15e-21;2!CL:0002321;1.31e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.11e-21;2 | |||
|ontology_enrichment_disease=DOID:5409!3.76e-12!4;DOID:4362!2.58e-10!5;DOID:169!7.57e-09!6;DOID:1325!3.88e-07!7;DOID:3904!3.88e-07!7 | |ontology_enrichment_disease=DOID:5409!3.76e-12!4;DOID:4362!2.58e-10!5;DOID:169!7.57e-09!6;DOID:1325!3.88e-07!7;DOID:3904!3.88e-07!7 | ||
|ontology_enrichment_disease_v019=DOID:169;2.54e-27;6!DOID:171;7.21e-17;10!DOID:4362;3.10e-09;5!DOID:3095;3.09e-08;22!DOID:2994;3.09e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.38e-27,6;DOID:171,6.93e-17,10;DOID:4362,3.22e-09,5;DOID:3095,3.04e-08,22;DOID:2994,3.04e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0006955!9.31e-12!2;UBERON:0004801!9.31e-12!2;UBERON:0000013!1.56e-10!5;UBERON:0002410!1.56e-10!5;UBERON:0000002!1.15e-08!6;UBERON:0001560!1.15e-08!6;UBERON:0006947!2.08e-08!3;UBERON:0004054!2.08e-08!3;UBERON:0001301!5.58e-07!1;UBERON:0001000!6.96e-07!1;UBERON:0005352!6.96e-07!1 | |ontology_enrichment_uberon=UBERON:0006955!9.31e-12!2;UBERON:0004801!9.31e-12!2;UBERON:0000013!1.56e-10!5;UBERON:0002410!1.56e-10!5;UBERON:0000002!1.15e-08!6;UBERON:0001560!1.15e-08!6;UBERON:0006947!2.08e-08!3;UBERON:0004054!2.08e-08!3;UBERON:0001301!5.58e-07!1;UBERON:0001000!6.96e-07!1;UBERON:0005352!6.96e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.87e-53;3!UBERON:0004054;2.87e-53;3!UBERON:0001301;6.62e-41;1!UBERON:0005904;2.71e-40;4!UBERON:0001000;3.30e-40;1!UBERON:0005352;3.30e-40;1!UBERON:0000013;1.57e-32;5!UBERON:0002410;1.57e-32;5!UBERON:0006955;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0000010;1.29e-18;8!UBERON:0004175;9.57e-18;21!UBERON:0000058;7.51e-17;10!UBERON:0003135;2.02e-15;11!UBERON:0003101;3.15e-08;22!UBERON:0000079;3.15e-08;22!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6!UBERON:0003133;1.98e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.87e-53,3;UBERON:0004054,2.87e-53,3;UBERON:0001301,6.62e-41,1;UBERON:0005904,2.71e-40,4;UBERON:0001000,3.30e-40,1;UBERON:0005352,3.30e-40,1;UBERON:0000013,1.44e-32,5;UBERON:0002410,1.44e-32,5;UBERON:0006955,5.70e-21,2;UBERON:0004801,5.70e-21,2;UBERON:0000010,1.24e-18,8;UBERON:0003135,2.02e-15,11;UBERON:0004175,4.84e-15,25;UBERON:0000058,2.26e-09,19;UBERON:0003101,3.15e-08,22;UBERON:0000079,3.15e-08,22;UBERON:0003133,3.19e-08,48;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0005156,8.00e-07,59;UBERON:0000990,8.00e-07,59 | |||
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|short_description=p@chr17:42015654..42015659,+ | |short_description=p@chr17:42015654..42015659,+ | ||
}} | }} |
Latest revision as of 17:17, 25 July 2015
Short description: | p@chr17:42015654..42015659, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42015654..42015659, + |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.87e-53 | 3 |
internal male genitalia | 2.87e-53 | 3 |
epididymis | 6.62e-41 | 1 |
duct of male reproductive system | 2.71e-40 | 4 |
vas deferens | 3.30e-40 | 1 |
spermatic cord | 3.30e-40 | 1 |
sympathetic nervous system | 1.44e-32 | 5 |
autonomic nervous system | 1.44e-32 | 5 |
uterine epithelium | 5.70e-21 | 2 |
cervix epithelium | 5.70e-21 | 2 |
peripheral nervous system | 1.24e-18 | 8 |
male reproductive organ | 2.02e-15 | 11 |
internal genitalia | 4.84e-15 | 25 |
duct | 2.26e-09 | 19 |
male organism | 3.15e-08 | 22 |
male reproductive system | 3.15e-08 | 22 |
reproductive organ | 3.19e-08 | 48 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
reproductive structure | 8.00e-07 | 59 |
reproductive system | 8.00e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.38e-27 | 6 |
neuroectodermal tumor | 6.93e-17 | 10 |
cervical cancer | 3.22e-09 | 5 |
germ cell and embryonal cancer | 3.04e-08 | 22 |
germ cell cancer | 3.04e-08 | 22 |