FFCP PHASE1:Hg19::chr17:39755914..39755961,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39755914..39755961,- | |||
|coexpression_cluster_id=C373 | |coexpression_cluster_id=C373 | ||
|description=CAGE_peak_at_chr17:39755914..39755961,- | |description=CAGE_peak_at_chr17:39755914..39755961,- | ||
|id=chr17:39755914..39755961,- | |id=chr17:39755914..39755961,- | ||
|ontology_enrichment_celltype=CL:1001319!8.58e-14!1;CL:1000600!8.58e-14!1;CL:0002379!1.10e-13!1;CL:0000066!7.29e-08!254;CL:0002535!9.25e-08!2;CL:1000415!1.64e-07!2;CL:0000076!5.48e-07!62 | |ontology_enrichment_celltype=CL:1001319!8.58e-14!1;CL:1000600!8.58e-14!1;CL:0002379!1.10e-13!1;CL:0000066!7.29e-08!254;CL:0002535!9.25e-08!2;CL:1000415!1.64e-07!2;CL:0000076!5.48e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.55e-98,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.03e-32!14;DOID:305!3.12e-18!106;DOID:3620!1.10e-13!1;DOID:3565!1.10e-13!1;DOID:0050687!4.23e-13!143;DOID:4362!3.72e-11!5;DOID:162!4.18e-10!235;DOID:14566!7.41e-10!239;DOID:4074!1.87e-07!2;DOID:4905!1.87e-07!2;DOID:3498!1.87e-07!2;DOID:3493!2.25e-07!2 | |ontology_enrichment_disease=DOID:1749!5.03e-32!14;DOID:305!3.12e-18!106;DOID:3620!1.10e-13!1;DOID:3565!1.10e-13!1;DOID:0050687!4.23e-13!143;DOID:4362!3.72e-11!5;DOID:162!4.18e-10!235;DOID:14566!7.41e-10!239;DOID:4074!1.87e-07!2;DOID:4905!1.87e-07!2;DOID:3498!1.87e-07!2;DOID:3493!2.25e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:1749;1.43e-15;14!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:1749,1.43e-15,14;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.70e-16!7;UBERON:0001173!2.70e-16!7;UBERON:0004912!2.70e-16!7;UBERON:0000997!3.98e-14!1;UBERON:0005056!3.98e-14!1;UBERON:0004645!8.58e-14!1;UBERON:0001256!8.58e-14!1;UBERON:0001259!8.58e-14!1;UBERON:0001282!2.07e-13!1;UBERON:0009842!2.07e-13!1;UBERON:0003704!2.07e-13!1;UBERON:0001171!2.07e-13!1;UBERON:0001172!2.07e-13!1;UBERON:0003343!2.35e-13!4;UBERON:0004785!2.35e-13!4;UBERON:0002394!4.38e-13!4;UBERON:0003928!4.38e-13!4;UBERON:0003729!7.14e-11!5;UBERON:0000344!6.68e-10!12;UBERON:0000002!1.91e-09!6;UBERON:0001560!1.91e-09!6;UBERON:0006955!9.25e-08!2;UBERON:0004801!9.25e-08!2;UBERON:0001905!1.45e-07!2;UBERON:0002757!1.45e-07!2;UBERON:0010134!1.45e-07!2;UBERON:0002784!1.45e-07!2;UBERON:0005408!1.45e-07!2;UBERON:0001899!1.45e-07!2;UBERON:0001255!1.54e-07!2;UBERON:0001556!1.54e-07!2;UBERON:0002075!9.39e-07!18 | |ontology_enrichment_uberon=UBERON:0002294!2.70e-16!7;UBERON:0001173!2.70e-16!7;UBERON:0004912!2.70e-16!7;UBERON:0000997!3.98e-14!1;UBERON:0005056!3.98e-14!1;UBERON:0004645!8.58e-14!1;UBERON:0001256!8.58e-14!1;UBERON:0001259!8.58e-14!1;UBERON:0001282!2.07e-13!1;UBERON:0009842!2.07e-13!1;UBERON:0003704!2.07e-13!1;UBERON:0001171!2.07e-13!1;UBERON:0001172!2.07e-13!1;UBERON:0003343!2.35e-13!4;UBERON:0004785!2.35e-13!4;UBERON:0002394!4.38e-13!4;UBERON:0003928!4.38e-13!4;UBERON:0003729!7.14e-11!5;UBERON:0000344!6.68e-10!12;UBERON:0000002!1.91e-09!6;UBERON:0001560!1.91e-09!6;UBERON:0006955!9.25e-08!2;UBERON:0004801!9.25e-08!2;UBERON:0001905!1.45e-07!2;UBERON:0002757!1.45e-07!2;UBERON:0010134!1.45e-07!2;UBERON:0002784!1.45e-07!2;UBERON:0005408!1.45e-07!2;UBERON:0001899!1.45e-07!2;UBERON:0001255!1.54e-07!2;UBERON:0001556!1.54e-07!2;UBERON:0002075!9.39e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.55e-98;2!UBERON:0004801;1.55e-98;2!UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;2.32e-07;33!UBERON:0003133;2.32e-07;44!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.55e-98,2;UBERON:0004801,1.55e-98,2;UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p@chr17:39755914..39755961,- | |short_description=p@chr17:39755914..39755961,- | ||
}} | }} |
Latest revision as of 16:45, 25 July 2015
Short description: | p@chr17:39755914..39755961, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39755914..39755961, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.55e-98 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.55e-98 | 2 |
cervix epithelium | 1.55e-98 | 2 |
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
squamous cell carcinoma | 1.43e-15 | 14 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |