FFCP PHASE1:Hg19::chr17:39659343..39659346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-331bp_to_ENST00000464634_5end | |association_with_transcript=-331bp_to_ENST00000464634_5end | ||
|cluster_id=chr17:39659343..39659346,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_21_at_KRT13_5end | |description=CAGE_peak_21_at_KRT13_5end | ||
|id=chr17:39659343..39659346,- | |id=chr17:39659343..39659346,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.10e-50;1!UBERON:0008814;6.30e-26;2!UBERON:0010056;6.30e-26;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!4.67e-27!2;UBERON:0001723!5.06e-19!3;UBERON:0001033!5.06e-19!3;UBERON:0010056!5.06e-19!3;UBERON:0002372!1.23e-14!1;UBERON:0001961!1.23e-14!1;UBERON:0001744!1.23e-14!1;UBERON:0001735!1.23e-14!1;UBERON:0006834!2.75e-14!1;UBERON:0001042!1.00e-12!10;UBERON:0009145!1.00e-12!10;UBERON:0006562!1.27e-11!11;UBERON:0000166!1.91e-10!21;UBERON:0005795!5.84e-10!22;UBERON:0000002!7.76e-10!6;UBERON:0001560!7.76e-10!6;UBERON:0000161!1.93e-09!35;UBERON:0003126!1.99e-08!7;UBERON:0001005!1.99e-08!7;UBERON:0000341!5.02e-08!2;UBERON:0000165!6.89e-08!28;UBERON:0000930!6.89e-08!28;UBERON:0000078!2.62e-07!18;UBERON:0000072!3.41e-07!46;UBERON:0001557!5.99e-07!19 | |ontology_enrichment_uberon=UBERON:0003127!4.67e-27!2;UBERON:0001723!5.06e-19!3;UBERON:0001033!5.06e-19!3;UBERON:0010056!5.06e-19!3;UBERON:0002372!1.23e-14!1;UBERON:0001961!1.23e-14!1;UBERON:0001744!1.23e-14!1;UBERON:0001735!1.23e-14!1;UBERON:0006834!2.75e-14!1;UBERON:0001042!1.00e-12!10;UBERON:0009145!1.00e-12!10;UBERON:0006562!1.27e-11!11;UBERON:0000166!1.91e-10!21;UBERON:0005795!5.84e-10!22;UBERON:0000002!7.76e-10!6;UBERON:0001560!7.76e-10!6;UBERON:0000161!1.93e-09!35;UBERON:0003126!1.99e-08!7;UBERON:0001005!1.99e-08!7;UBERON:0000341!5.02e-08!2;UBERON:0000165!6.89e-08!28;UBERON:0000930!6.89e-08!28;UBERON:0000078!2.62e-07!18;UBERON:0000072!3.41e-07!46;UBERON:0001557!5.99e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.53e-66;3!UBERON:0001033;5.53e-66;3!UBERON:0005795;1.46e-50;1!UBERON:0001043;8.70e-18;3!UBERON:0002050;2.66e-11;5!UBERON:0005423;2.66e-11;5!UBERON:0000020;1.19e-09;23!UBERON:0001032;2.72e-09;24!UBERON:0004456;2.72e-09;24!UBERON:0000165;4.14e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.53e-66,3;UBERON:0001033,6.53e-66,3;UBERON:0010056,6.53e-66,3;UBERON:0001042,1.04e-20,10;UBERON:0009145,1.04e-20,10;UBERON:0006562,6.17e-19,11;UBERON:0001043,8.00e-18,3;UBERON:0009143,8.00e-18,3;UBERON:0008814,5.09e-12,18;UBERON:0001557,1.91e-11,19;UBERON:0000166,4.96e-10,22;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0000165,7.40e-08,29;UBERON:0000930,7.40e-08,29 | |||
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|short_description=p21@KRT13 | |short_description=p21@KRT13 | ||
}} | }} |
Latest revision as of 05:28, 20 September 2015
Short description: | p21@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -331bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.53e-66 | 3 |
gustatory system | 6.53e-66 | 3 |
future tongue | 6.53e-66 | 3 |
chordate pharynx | 1.04e-20 | 10 |
pharyngeal region of foregut | 1.04e-20 | 10 |
pharynx | 6.17e-19 | 11 |
esophagus | 8.00e-18 | 3 |
esophageal region | 8.00e-18 | 3 |
pharyngeal arch system | 5.09e-12 | 18 |
upper respiratory tract | 1.91e-11 | 19 |
oral opening | 4.96e-10 | 22 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
mouth | 7.40e-08 | 29 |
stomodeum | 7.40e-08 | 29 |