FFCP PHASE1:Hg19::chr17:38613071..38613097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38613071..38613097,+ | |||
|coexpression_cluster_id=C353 | |coexpression_cluster_id=C353 | ||
|description=CAGE_peak_at_chr17:38613071..38613097,+ | |description=CAGE_peak_at_chr17:38613071..38613097,+ | ||
|id=chr17:38613071..38613097,+ | |id=chr17:38613071..38613097,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.99e-24!180;CL:0000222!1.03e-18!119;CL:0000183!6.28e-16!59;CL:0000680!3.62e-15!57;CL:0000056!3.62e-15!57;CL:0000355!3.62e-15!57;CL:0000057!4.48e-14!75;CL:0000187!1.07e-13!54;CL:0000393!5.18e-12!60;CL:0000211!5.18e-12!60;CL:0000192!9.22e-12!42;CL:0000514!9.22e-12!42;CL:0000144!6.54e-09!625;CL:0002371!7.56e-09!591;CL:0000359!1.69e-08!32;CL:0000220!1.36e-07!246;CL:0002321!1.90e-07!248;CL:0000048!6.04e-07!430 | |ontology_enrichment_celltype=CL:0000055!7.99e-24!180;CL:0000222!1.03e-18!119;CL:0000183!6.28e-16!59;CL:0000680!3.62e-15!57;CL:0000056!3.62e-15!57;CL:0000355!3.62e-15!57;CL:0000057!4.48e-14!75;CL:0000187!1.07e-13!54;CL:0000393!5.18e-12!60;CL:0000211!5.18e-12!60;CL:0000192!9.22e-12!42;CL:0000514!9.22e-12!42;CL:0000144!6.54e-09!625;CL:0002371!7.56e-09!591;CL:0000359!1.69e-08!32;CL:0000220!1.36e-07!246;CL:0002321!1.90e-07!248;CL:0000048!6.04e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000192;5.81e-09;43!CL:0000359;2.69e-08;32!CL:0000187;1.22e-07;55!CL:0000499;7.16e-07;28!CL:0000327;7.87e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.28e-15,58;CL:0000056,5.28e-15,58;CL:0000355,5.28e-15,58;CL:0000187,6.30e-13,55;CL:0000048,6.84e-13,427;CL:0000057,7.65e-13,76;CL:0000723,2.95e-12,433;CL:0000192,6.48e-12,43;CL:0000514,6.48e-12,43;CL:0000034,1.92e-11,441;CL:0000393,9.79e-11,61;CL:0000211,9.79e-11,61;CL:0000222,5.19e-10,121;CL:0000359,2.00e-08,32;CL:0000327,5.15e-07,15;CL:0000499,5.33e-07,28;CL:0000136,7.78e-07,15;CL:0002320,8.56e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;5.81e-09;43!CL:0000355;1.81e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.39e-18!143;UBERON:0000914!1.56e-14!83;UBERON:0002329!1.56e-14!83;UBERON:0003077!1.56e-14!83;UBERON:0003059!1.56e-14!83;UBERON:0007282!1.56e-14!83;UBERON:0009618!1.56e-14!83;UBERON:0007285!1.56e-14!83;UBERON:0003914!3.59e-14!118;UBERON:0004872!5.11e-13!84;UBERON:0002385!6.26e-13!63;UBERON:0001015!6.26e-13!63;UBERON:0000383!6.26e-13!63;UBERON:0001134!7.56e-13!61;UBERON:0002036!7.56e-13!61;UBERON:0003082!7.56e-13!61;UBERON:0002049!1.15e-12!79;UBERON:0007798!1.15e-12!79;UBERON:0000490!1.19e-12!138;UBERON:0002100!1.51e-12!216;UBERON:0004290!3.84e-12!70;UBERON:0000486!9.06e-12!82;UBERON:0000055!3.22e-10!69;UBERON:0004535!3.55e-10!110;UBERON:0001009!5.11e-10!113;UBERON:0003104!1.65e-09!238;UBERON:0009142!1.65e-09!238;UBERON:0001981!2.64e-09!60;UBERON:0007500!2.64e-09!60;UBERON:0004537!2.64e-09!60;UBERON:0006965!2.64e-09!60;UBERON:0001013!6.08e-08!14;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0000477!1.51e-07!286;UBERON:0000481!3.09e-07!347;UBERON:0000926!7.81e-07!448;UBERON:0004120!7.81e-07!448;UBERON:0006603!7.81e-07!448;UBERON:0001637!8.14e-07!42;UBERON:0003509!8.14e-07!42;UBERON:0004572!8.14e-07!42 | |ontology_enrichment_uberon=UBERON:0005256!5.39e-18!143;UBERON:0000914!1.56e-14!83;UBERON:0002329!1.56e-14!83;UBERON:0003077!1.56e-14!83;UBERON:0003059!1.56e-14!83;UBERON:0007282!1.56e-14!83;UBERON:0009618!1.56e-14!83;UBERON:0007285!1.56e-14!83;UBERON:0003914!3.59e-14!118;UBERON:0004872!5.11e-13!84;UBERON:0002385!6.26e-13!63;UBERON:0001015!6.26e-13!63;UBERON:0000383!6.26e-13!63;UBERON:0001134!7.56e-13!61;UBERON:0002036!7.56e-13!61;UBERON:0003082!7.56e-13!61;UBERON:0002049!1.15e-12!79;UBERON:0007798!1.15e-12!79;UBERON:0000490!1.19e-12!138;UBERON:0002100!1.51e-12!216;UBERON:0004290!3.84e-12!70;UBERON:0000486!9.06e-12!82;UBERON:0000055!3.22e-10!69;UBERON:0004535!3.55e-10!110;UBERON:0001009!5.11e-10!113;UBERON:0003104!1.65e-09!238;UBERON:0009142!1.65e-09!238;UBERON:0001981!2.64e-09!60;UBERON:0007500!2.64e-09!60;UBERON:0004537!2.64e-09!60;UBERON:0006965!2.64e-09!60;UBERON:0001013!6.08e-08!14;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0000477!1.51e-07!286;UBERON:0000481!3.09e-07!347;UBERON:0000926!7.81e-07!448;UBERON:0004120!7.81e-07!448;UBERON:0006603!7.81e-07!448;UBERON:0001637!8.14e-07!42;UBERON:0003509!8.14e-07!42;UBERON:0004572!8.14e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.46e-09;9!UBERON:0000042;2.46e-09;9!UBERON:0004905;2.72e-09;8!UBERON:0000982;2.72e-09;8!UBERON:0004770;2.72e-09;8!UBERON:0001013;1.42e-08;14!UBERON:0011135;3.31e-08;5!UBERON:0002216;3.31e-08;5!UBERON:0011134;3.31e-08;5!UBERON:0002209;3.31e-08;5!UBERON:0002213;3.31e-08;5!UBERON:0007844;3.31e-08;5!UBERON:0011138;3.31e-08;5!UBERON:0001130;3.31e-08;5!UBERON:0001066;3.31e-08;5!UBERON:0001468;3.31e-08;5!UBERON:0003688;4.20e-08;6!UBERON:0002358;4.20e-08;6!UBERON:0003684;4.20e-08;6!UBERON:0001178;4.20e-08;6 | |||
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| ||
|short_description=p@chr17:38613071..38613097,+ | |short_description=p@chr17:38613071..38613097,+ | ||
}} | }} |
Latest revision as of 16:28, 25 July 2015
Short description: | p@chr17:38613071..38613097, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613071..38613097, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.28e-15 | 58 |
myoblast | 5.28e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.28e-15 | 58 |
muscle cell | 6.30e-13 | 55 |
multi fate stem cell | 6.84e-13 | 427 |
fibroblast | 7.65e-13 | 76 |
somatic stem cell | 2.95e-12 | 433 |
smooth muscle cell | 6.48e-12 | 43 |
smooth muscle myoblast | 6.48e-12 | 43 |
stem cell | 1.92e-11 | 441 |
electrically responsive cell | 9.79e-11 | 61 |
electrically active cell | 9.79e-11 | 61 |
mesodermal cell | 5.19e-10 | 121 |
vascular associated smooth muscle cell | 2.00e-08 | 32 |
extracellular matrix secreting cell | 5.15e-07 | 15 |
stromal cell | 5.33e-07 | 28 |
fat cell | 7.78e-07 | 15 |
connective tissue cell | 8.56e-07 | 361 |