FFCP PHASE1:Hg19::chr17:36720231..36720253,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80725 | |EntrezGene=80725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29506 | |HGNC=29506 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0H9 | |UniProt=Q9C0H9 | ||
|association_with_transcript=0bp_to_uc002hqf.1_5end | |association_with_transcript=0bp_to_uc002hqf.1_5end | ||
|cluster_id=chr17:36720231..36720253,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_15_at_SRCIN1_5end | |description=CAGE_peak_15_at_SRCIN1_5end | ||
|id=chr17:36720231..36720253,- | |id=chr17:36720231..36720253,- | ||
|ontology_enrichment_celltype=CL:0000039!9.58e-11!7;CL:0000586!9.58e-11!7;CL:0002322!6.34e-09!5 | |ontology_enrichment_celltype=CL:0000039!9.58e-11!7;CL:0000586!9.58e-11!7;CL:0002322!6.34e-09!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |||
|ontology_enrichment_disease=DOID:3095!1.45e-12!22;DOID:2994!1.45e-12!22 | |ontology_enrichment_disease=DOID:3095!1.45e-12!22;DOID:2994!1.45e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:171;3.84e-14;10!DOID:3095;5.82e-07;22!DOID:2994;5.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.97e-14,10;DOID:3095,5.91e-07,22;DOID:2994,5.91e-07,22 | |||
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|short_description=p15@SRCIN1 | |short_description=p15@SRCIN1 | ||
}} | }} |
Latest revision as of 19:22, 19 September 2015
Short description: | p15@SRCIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SRCIN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_uc002hqf.1_5end |
EntrezGene: | SRCIN1 |
HGNC: | 29506 |
UniProt: | Q9C0H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
segmental subdivision of hindbrain | 2.27e-44 | 12 |
hindbrain | 2.27e-44 | 12 |
presumptive hindbrain | 2.27e-44 | 12 |
segmental subdivision of nervous system | 5.03e-41 | 13 |
posterior neural tube | 1.14e-35 | 15 |
chordal neural plate | 1.14e-35 | 15 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
neurectoderm | 4.44e-14 | 86 |
medulla oblongata | 2.89e-12 | 3 |
myelencephalon | 2.89e-12 | 3 |
future myelencephalon | 2.89e-12 | 3 |
regional part of nervous system | 2.17e-10 | 53 |
regional part of brain | 2.17e-10 | 53 |
neural tube | 7.17e-10 | 56 |
neural rod | 7.17e-10 | 56 |
future spinal cord | 7.17e-10 | 56 |
neural keel | 7.17e-10 | 56 |
brain | 3.92e-08 | 68 |
future brain | 3.92e-08 | 68 |
ectoderm-derived structure | 3.21e-07 | 171 |
ectoderm | 3.21e-07 | 171 |
presumptive ectoderm | 3.21e-07 | 171 |
central nervous system | 6.23e-07 | 81 |
neural plate | 6.23e-07 | 82 |
presumptive neural plate | 6.23e-07 | 82 |
brainstem | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.97e-14 | 10 |
germ cell and embryonal cancer | 5.91e-07 | 22 |
germ cell cancer | 5.91e-07 | 22 |