FFCP PHASE1:Hg19::chr18:40194793..40194820,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:40194793..40194820,+
|short_description=p@chr18:40194793..40194820,+
|description=CAGE_peak_at_chr18:40194793..40194820,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:40194793..40194820,+ | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_at_chr18:40194793..40194820,+ | |||
|id=chr18:40194793..40194820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.61e-34;1!CL:0000164;3.61e-34;1!CL:0000502;3.61e-34;1!CL:0000172;3.61e-34;1!CL:0000173;3.61e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.61e-34,1;CL:0000164,3.61e-34,1;CL:0000502,3.61e-34,1;CL:0000172,3.61e-34,1;CL:0000173,3.61e-34,1;CL:0002351,3.61e-34,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.61e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;3.61e-34;1!DOID:3119;1.57e-10;14!DOID:5409;1.63e-09;4!DOID:169;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.61e-34,1;DOID:3119,1.57e-10,14;DOID:5409,1.57e-09,4;DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002780!5.39e-36!41;UBERON:0001890!5.39e-36!41;UBERON:0006240!5.39e-36!41;UBERON:0003080!4.93e-35!42;UBERON:0001049!8.48e-33!57;UBERON:0005068!8.48e-33!57;UBERON:0006241!8.48e-33!57;UBERON:0007135!8.48e-33!57;UBERON:0002791!9.58e-33!33;UBERON:0002020!6.82e-32!34;UBERON:0003528!6.82e-32!34;UBERON:0001893!1.11e-31!34;UBERON:0002616!1.67e-31!59;UBERON:0001869!3.94e-30!32;UBERON:0000955!4.69e-28!69;UBERON:0006238!4.69e-28!69;UBERON:0002619!6.20e-26!22;UBERON:0001017!9.03e-25!82;UBERON:0000073!2.12e-24!94;UBERON:0001016!2.12e-24!94;UBERON:0005743!2.36e-23!86;UBERON:0003056!1.10e-22!61;UBERON:0000956!1.34e-22!25;UBERON:0000203!1.34e-22!25;UBERON:0003075!1.01e-21!86;UBERON:0007284!1.01e-21!86;UBERON:0002346!1.69e-20!90;UBERON:0001950!4.08e-20!20;UBERON:0007023!6.64e-18!115;UBERON:0000033!1.27e-14!123;UBERON:0000153!1.14e-13!129;UBERON:0007811!1.14e-13!129;UBERON:0000349!3.12e-13!5;UBERON:0000025!5.73e-13!194;UBERON:0004121!6.29e-12!169;UBERON:0000924!1.67e-11!173;UBERON:0006601!1.67e-11!173;UBERON:0002308!9.47e-11!9;UBERON:0000125!9.47e-11!9;UBERON:0004111!1.03e-10!241;UBERON:0002420!1.22e-10!9;UBERON:0007245!1.22e-10!9;UBERON:0010009!1.22e-10!9;UBERON:0010011!1.22e-10!9;UBERON:0000454!1.22e-10!9;UBERON:0001954!2.31e-09!2;UBERON:0003022!2.31e-09!2;UBERON:0002421!2.31e-09!2;UBERON:0002600!2.31e-09!2;UBERON:0001897!3.34e-09!2;UBERON:0009663!4.46e-09!7;UBERON:0001875!6.85e-09!2;UBERON:0006514!6.85e-09!2;UBERON:0001870!8.35e-09!2;UBERON:0000483!9.67e-09!309;UBERON:0000119!1.40e-08!312;UBERON:0000477!1.46e-08!286;UBERON:0001871!4.54e-08!7;UBERON:0001872!1.36e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;3.06e-12;2!UBERON:0001872;6.55e-08;5!UBERON:0002108;7.25e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,3.24e-12,2;UBERON:0001872,6.55e-08,5;UBERON:0002108,7.49e-08,4 | |||
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| ||
|short_description=p@chr18:40194793..40194820,+ | |||
}} | }} |
Latest revision as of 00:54, 26 July 2015
Short description: | p@chr18:40194793..40194820, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:40194793..40194820, + |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.61e-34 | 1 |
enteroendocrine cell | 3.61e-34 | 1 |
type D enteroendocrine cell | 3.61e-34 | 1 |
somatostatin secreting cell | 3.61e-34 | 1 |
pancreatic D cell | 3.61e-34 | 1 |
progenitor cell of endocrine pancreas | 3.61e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
duodenum | 3.24e-12 | 2 |
parietal lobe | 6.55e-08 | 5 |
small intestine | 7.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.61e-34 | 1 |
gastrointestinal system cancer | 1.57e-10 | 14 |
lung small cell carcinoma | 1.57e-09 | 4 |
neuroendocrine tumor | 8.02e-07 | 6 |