FFCP PHASE1:Hg19::chr16:19421885..19421901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79838 | |EntrezGene=79838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |HGNC=22999 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYU8 | |UniProt=F5GYU8 | ||
|association_with_transcript=24bp_to_ENST00000541464,uc010vaq.1_5end | |association_with_transcript=24bp_to_ENST00000541464,uc010vaq.1_5end | ||
|cluster_id=chr16:19421885..19421901,+ | |||
|coexpression_cluster_id=C3539 | |coexpression_cluster_id=C3539 | ||
|description=CAGE_peak_10_at_TMC5_5end | |description=CAGE_peak_10_at_TMC5_5end | ||
|id=chr16:19421885..19421901,+ | |id=chr16:19421885..19421901,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.30e-10!254;CL:0000039!2.85e-09!7;CL:0000586!2.85e-09!7 | |ontology_enrichment_celltype=CL:0000066!5.30e-10!254;CL:0000039!2.85e-09!7;CL:0000586!2.85e-09!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.80e-50;29!UBERON:0006595;1.10e-12;86!UBERON:0001041;6.27e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.87e-27!106;DOID:0050687!3.01e-24!143;DOID:162!2.20e-13!235;DOID:14566!7.35e-13!239;DOID:299!3.33e-07!25 | |ontology_enrichment_disease=DOID:305!1.87e-27!106;DOID:0050687!3.01e-24!143;DOID:162!2.20e-13!235;DOID:14566!7.35e-13!239;DOID:299!3.33e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.80e-10,106;DOID:0050687,4.03e-09,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;1.43e-48;9!UBERON:0001557;1.43e-48;9!UBERON:0003127;4.92e-26;2!UBERON:0000072;6.14e-24;37!UBERON:0000065;9.39e-23;44!UBERON:0001004;4.97e-15;65!UBERON:0003126;4.05e-08;7!UBERON:0001005;4.05e-08;7!UBERON:0005178;1.10e-07;34!UBERON:0002224;1.10e-07;34!UBERON:0006562;1.16e-07;2 | |||
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| ||
|short_description=p10@TMC5 | |short_description=p10@TMC5 | ||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p10@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMC5_5end |
Coexpression cluster: | C3539_lung_adenocarcinoma_trachea_gastric_somatostatinoma_Hep2_signet |
Association with transcript: | 24bp_to_ENST00000541464, uc010vaq.1_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | F5GYU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.56e-48 | 9 |
respiratory primordium | 5.98e-38 | 38 |
endoderm of foregut | 5.98e-38 | 38 |
respiratory tract | 2.37e-26 | 54 |
open tracheal system trachea | 4.08e-26 | 2 |
upper respiratory tract | 8.05e-23 | 19 |
segment of respiratory tract | 3.30e-20 | 47 |
foregut | 4.73e-19 | 87 |
respiratory system | 6.88e-19 | 74 |
subdivision of digestive tract | 9.09e-19 | 118 |
digestive system | 5.47e-15 | 145 |
digestive tract | 5.47e-15 | 145 |
primitive gut | 5.47e-15 | 145 |
endoderm-derived structure | 1.97e-13 | 160 |
endoderm | 1.97e-13 | 160 |
presumptive endoderm | 1.97e-13 | 160 |
primordium | 1.14e-09 | 160 |
thoracic cavity element | 3.18e-09 | 34 |
thoracic cavity | 3.18e-09 | 34 |
organ system subdivision | 5.24e-09 | 223 |
thoracic segment organ | 5.87e-09 | 35 |
trachea | 3.84e-08 | 7 |
respiratory airway | 3.84e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.80e-10 | 106 |
cell type cancer | 4.03e-09 | 143 |