FFCP PHASE1:Hg19::chr16:12059050..12059079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=608 | |EntrezGene=608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11913 | |HGNC=11913 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TQ40 | |UniProt=Q2TQ40 | ||
|association_with_transcript=0bp_to_ENST00000396495_5end | |association_with_transcript=0bp_to_ENST00000396495_5end | ||
|cluster_id=chr16:12059050..12059079,+ | |||
|coexpression_cluster_id=C1196 | |coexpression_cluster_id=C1196 | ||
|description=CAGE_peak_1_at_TNFRSF17_5end | |description=CAGE_peak_1_at_TNFRSF17_5end | ||
|id=chr16:12059050..12059079,+ | |id=chr16:12059050..12059079,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.92e-49!24;CL:0000826!1.92e-49!24;CL:0000236!2.55e-29!14;CL:0000542!1.21e-21!53;CL:0000051!1.21e-21!53;CL:0000838!3.02e-20!52;CL:0002087!6.73e-13!119;CL:0000738!3.72e-11!140;CL:0002031!1.79e-09!124;CL:0000037!2.45e-07!172;CL:0000566!2.45e-07!172;CL:0000817!5.60e-07!3;CL:0000988!5.93e-07!182;CL:0000784!8.08e-07!3 | |ontology_enrichment_celltype=CL:0000945!1.92e-49!24;CL:0000826!1.92e-49!24;CL:0000236!2.55e-29!14;CL:0000542!1.21e-21!53;CL:0000051!1.21e-21!53;CL:0000838!3.02e-20!52;CL:0002087!6.73e-13!119;CL:0000738!3.72e-11!140;CL:0002031!1.79e-09!124;CL:0000037!2.45e-07!172;CL:0000566!2.45e-07!172;CL:0000817!5.60e-07!3;CL:0000988!5.93e-07!182;CL:0000784!8.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.73e-69;24!CL:0000236;3.11e-38;13!CL:0000542;4.54e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.43e-69,24;CL:0000826,7.43e-69,24;CL:0000236,1.25e-41,14;CL:0000542,9.78e-31,53;CL:0000051,9.78e-31,53;CL:0000838,1.54e-28,52;CL:0002087,2.39e-14,115;CL:0000738,2.95e-12,136;CL:0002031,3.97e-11,120;CL:0000037,1.05e-08,168;CL:0000785,3.18e-08,2;CL:0000955,3.18e-08,2;CL:0000818,3.18e-08,2;CL:0000954,3.18e-08,2;CL:0000816,3.18e-08,2;CL:0000988,5.97e-08,177;CL:0002032,1.09e-07,161;CL:0000837,1.09e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;4.54e-19;53!CL:0000954;3.23e-08;2!UBERON:0004872;4.36e-08;7 | |||
|ontology_enrichment_disease=DOID:0060058!1.51e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.51e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.89e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.83e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-32!115;UBERON:0000178!4.13e-14!15;UBERON:0000179!4.13e-14!15;UBERON:0000463!4.13e-14!15;UBERON:0002106!2.01e-07!3;UBERON:0004854!2.01e-07!3;UBERON:0009034!2.01e-07!3;UBERON:0002095!2.01e-07!3;UBERON:0004782!2.01e-07!3;UBERON:0003281!2.01e-07!3;UBERON:0009664!2.01e-07!3;UBERON:0002296!2.01e-07!3;UBERON:0005602!2.01e-07!3;UBERON:0001179!2.01e-07!3;UBERON:0006293!2.01e-07!3;UBERON:0004177!2.02e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.90e-32!115;UBERON:0000178!4.13e-14!15;UBERON:0000179!4.13e-14!15;UBERON:0000463!4.13e-14!15;UBERON:0002106!2.01e-07!3;UBERON:0004854!2.01e-07!3;UBERON:0009034!2.01e-07!3;UBERON:0002095!2.01e-07!3;UBERON:0004782!2.01e-07!3;UBERON:0003281!2.01e-07!3;UBERON:0009664!2.01e-07!3;UBERON:0002296!2.01e-07!3;UBERON:0005602!2.01e-07!3;UBERON:0001179!2.01e-07!3;UBERON:0006293!2.01e-07!3;UBERON:0004177!2.02e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.31e-13;32!UBERON:0000178;6.43e-13;15!UBERON:0000179;6.43e-13;15!UBERON:0000463;6.43e-13;15!UBERON:0004177;3.99e-11;5!UBERON:0005057;3.99e-11;5!UBERON:0002106;4.05e-11;3!UBERON:0002193;6.71e-10;42!UBERON:0001829;6.21e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-14,114;UBERON:0000178,6.66e-13,15;UBERON:0000179,6.66e-13,15;UBERON:0000463,6.66e-13,15;UBERON:0002106,3.35e-11,3;UBERON:0004854,3.35e-11,3;UBERON:0009034,3.35e-11,3;UBERON:0002095,3.35e-11,3;UBERON:0004782,3.35e-11,3;UBERON:0003281,3.35e-11,3;UBERON:0009664,3.35e-11,3;UBERON:0002296,3.35e-11,3;UBERON:0005602,3.35e-11,3;UBERON:0001179,3.35e-11,3;UBERON:0006293,3.35e-11,3;UBERON:0004177,5.22e-08,7;UBERON:0005057,5.22e-08,7;UBERON:0001829,6.21e-08,2 | |||
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| ||
|short_description=p1@TNFRSF17 | |short_description=p1@TNFRSF17 | ||
}} | }} |
Latest revision as of 07:43, 20 September 2015
Short description: | p1@TNFRSF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF17_5end |
Coexpression cluster: | C1196_lymphoma_CD19_diffuse_lymphangiectasia_B_xeroderma_b |
Association with transcript: | 0bp_to_ENST00000396495_5end |
EntrezGene: | TNFRSF17 |
HGNC: | 11913 |
UniProt: | Q2TQ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.43e-69 | 24 |
pro-B cell | 7.43e-69 | 24 |
B cell | 1.25e-41 | 14 |
lymphocyte | 9.78e-31 | 53 |
common lymphoid progenitor | 9.78e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-28 | 52 |
nongranular leukocyte | 2.39e-14 | 115 |
leukocyte | 2.95e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 3.97e-11 | 120 |
hematopoietic stem cell | 1.05e-08 | 168 |
mature B cell | 3.18e-08 | 2 |
pre-B-II cell | 3.18e-08 | 2 |
transitional stage B cell | 3.18e-08 | 2 |
small pre-B-II cell | 3.18e-08 | 2 |
immature B cell | 3.18e-08 | 2 |
hematopoietic cell | 5.97e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.09e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.22e-14 | 114 |
blood | 6.66e-13 | 15 |
haemolymphatic fluid | 6.66e-13 | 15 |
organism substance | 6.66e-13 | 15 |
spleen | 3.35e-11 | 3 |
gastrointestinal system mesentery | 3.35e-11 | 3 |
stomach region | 3.35e-11 | 3 |
mesentery | 3.35e-11 | 3 |
gastrointestinal system serosa | 3.35e-11 | 3 |
mesentery of stomach | 3.35e-11 | 3 |
gut mesentery | 3.35e-11 | 3 |
dorsal mesentery | 3.35e-11 | 3 |
dorsal mesogastrium | 3.35e-11 | 3 |
peritoneal cavity | 3.35e-11 | 3 |
spleen primordium | 3.35e-11 | 3 |
hemopoietic organ | 5.22e-08 | 7 |
immune organ | 5.22e-08 | 7 |
major salivary gland | 6.21e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.83e-09 | 10 |