FFCP PHASE1:Hg19::chr15:81187409..81187422,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81187409..81187422,+ | |||
|coexpression_cluster_id=C387 | |coexpression_cluster_id=C387 | ||
|description=CAGE_peak_at_chr15:81187409..81187422,+ | |description=CAGE_peak_at_chr15:81187409..81187422,+ | ||
|id=chr15:81187409..81187422,+ | |id=chr15:81187409..81187422,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.64e-31!75;CL:0000055!1.19e-18!180;CL:0002620!1.56e-13!23;CL:0002334!8.28e-10!12;CL:0000134!6.29e-09!358;CL:0002320!6.38e-09!365;CL:0000219!8.73e-09!390;CL:0000048!1.09e-08!430;CL:0000499!1.95e-08!27;CL:0000723!2.72e-08!436;CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4;CL:0000034!8.79e-08!444;CL:0002579!3.60e-07!3;CL:0000135!5.00e-07!3;CL:0000386!5.00e-07!3;CL:0000388!5.00e-07!3;CL:0002615!5.72e-07!3;CL:0002580!7.33e-07!3 | |ontology_enrichment_celltype=CL:0000057!1.64e-31!75;CL:0000055!1.19e-18!180;CL:0002620!1.56e-13!23;CL:0002334!8.28e-10!12;CL:0000134!6.29e-09!358;CL:0002320!6.38e-09!365;CL:0000219!8.73e-09!390;CL:0000048!1.09e-08!430;CL:0000499!1.95e-08!27;CL:0000723!2.72e-08!436;CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4;CL:0000034!8.79e-08!444;CL:0002579!3.60e-07!3;CL:0000135!5.00e-07!3;CL:0000386!5.00e-07!3;CL:0000388!5.00e-07!3;CL:0002615!5.72e-07!3;CL:0002580!7.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;8.64e-19;3!CL:0000135;2.89e-18;3!CL:0000388;2.89e-18;3!CL:0002615;3.76e-18;3!CL:0002334;1.79e-17;12!CL:0000136;3.15e-11;13!CL:0002580;8.91e-09;3!CL:0000214;9.44e-09;3!CL:0002581;1.86e-07;1!CL:0002616;1.86e-07;1!CL:0000511;2.92e-07;1!CL:0002625;2.92e-07;1!CL:0000216;2.92e-07;1!CL:0002591;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,9.18e-19,3;CL:0000057,1.60e-18,76;CL:0000135,2.50e-18,3;CL:0000388,2.50e-18,3;CL:0002615,3.77e-18,3;CL:0002334,1.45e-17,12;CL:0000136,1.06e-09,15;CL:0002580,6.66e-09,3;CL:0000214,9.45e-09,3;CL:0000134,5.65e-08,354;CL:0002320,1.05e-07,361;CL:0002581,1.75e-07,1;CL:0002616,1.98e-07,1;CL:0000511,3.01e-07,1;CL:0002625,3.01e-07,1;CL:0000216,3.01e-07,1;CL:0000048,5.32e-07,427;CL:0000723,8.09e-07,433;CL:0000219,9.13e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.25e-09!5;DOID:450!2.25e-09!5;DOID:66!2.25e-09!5;DOID:423!2.25e-09!5;DOID:0080000!2.25e-09!5;DOID:11722!2.25e-09!5 | |ontology_enrichment_disease=DOID:17!2.25e-09!5;DOID:450!2.25e-09!5;DOID:66!2.25e-09!5;DOID:423!2.25e-09!5;DOID:0080000!2.25e-09!5;DOID:11722!2.25e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:3369;3.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.73e-12!6;UBERON:0002358!1.73e-12!6;UBERON:0003684!1.73e-12!6;UBERON:0001178!1.73e-12!6;UBERON:0004457!5.04e-10!12;UBERON:0000042!5.04e-10!12;UBERON:0002384!1.15e-09!375;UBERON:0002097!1.98e-08!40;UBERON:0000415!8.30e-08!4;UBERON:0007240!8.30e-08!4;UBERON:0005742!8.30e-08!4;UBERON:0005734!8.30e-08!4;UBERON:0004664!8.30e-08!4;UBERON:0004663!8.30e-08!4;UBERON:0003102!1.79e-07!95;UBERON:0002199!5.00e-07!45;UBERON:0002416!5.00e-07!45;UBERON:0000043!5.00e-07!3 | |ontology_enrichment_uberon=UBERON:0003688!1.73e-12!6;UBERON:0002358!1.73e-12!6;UBERON:0003684!1.73e-12!6;UBERON:0001178!1.73e-12!6;UBERON:0004457!5.04e-10!12;UBERON:0000042!5.04e-10!12;UBERON:0002384!1.15e-09!375;UBERON:0002097!1.98e-08!40;UBERON:0000415!8.30e-08!4;UBERON:0007240!8.30e-08!4;UBERON:0005742!8.30e-08!4;UBERON:0005734!8.30e-08!4;UBERON:0004664!8.30e-08!4;UBERON:0004663!8.30e-08!4;UBERON:0003102!1.79e-07!95;UBERON:0002199!5.00e-07!45;UBERON:0002416!5.00e-07!45;UBERON:0000043!5.00e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.79e-41;9!UBERON:0000042;7.79e-41;9!UBERON:0003688;3.85e-35;6!UBERON:0002358;3.85e-35;6!UBERON:0003684;3.85e-35;6!UBERON:0001178;3.85e-35;6!UBERON:0007846;2.89e-18;3!UBERON:0000043;2.89e-18;3!UBERON:0007845;2.89e-18;3!UBERON:0005406;3.09e-13;2!UBERON:0006915;9.44e-09;3!UBERON:0007616;9.44e-09;3!UBERON:0002217;9.44e-09;3!UBERON:0002018;9.44e-09;3!UBERON:0001136;2.92e-07;1!UBERON:0001343;2.92e-07;1!UBERON:0004910;2.92e-07;1!UBERON:0004813;2.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.10e-35,6;UBERON:0002358,4.10e-35,6;UBERON:0003684,4.10e-35,6;UBERON:0001178,4.10e-35,6;UBERON:0004457,2.53e-30,12;UBERON:0000042,2.53e-30,12;UBERON:0007846,2.50e-18,3;UBERON:0000043,2.50e-18,3;UBERON:0007845,2.50e-18,3;UBERON:0005406,3.09e-13,2;UBERON:0006915,9.45e-09,3;UBERON:0007616,9.45e-09,3;UBERON:0002217,9.45e-09,3;UBERON:0002018,9.45e-09,3;UBERON:0004923,1.29e-08,66;UBERON:0004458,2.98e-08,49;UBERON:0002384,3.64e-08,371;UBERON:0001136,3.01e-07,1;UBERON:0001343,3.01e-07,1;UBERON:0004910,3.01e-07,1;UBERON:0005154,3.01e-07,1;UBERON:0005295,3.01e-07,1;UBERON:0004813,3.01e-07,1;UBERON:0005297,3.01e-07,1;UBERON:0005294,3.01e-07,1;UBERON:0010141,3.01e-07,1;UBERON:0005891,3.01e-07,1 | |||
|phase1_expression=0.726713517082227,4.71021152560163,2.81908808191942,7.00513088471913,1.34088328328186,5.23403114460221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.25326102332916,0.794455084879313,4.58938593198102,0.709336764396714,1.68203280042692,0,0.24666754841716,0.311211035399766,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,1.48360157567134,0,0.718618141816238,0,0,0,0.438977620880838,2.14541457059314,0.45071417671979,0,1.97328599257748,0.427114777637135,1.27159140695737,0.900273288253207,0.412210116953756,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,2.27190396819703,0.460249493211497,3.07127507955743,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0.434418072340414,0,0.686286847621712,0,0,0.106727557803444,0,0,0,1.98486246255021,0.920771839728375,7.29716245525991,4.22859192543813,4.60536524160033,5.62988724002626,5.93672265779964,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5740617341532,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,6.58589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.568209015825267,1.0062716070103,1.77962244319307,0.228840068396924,1.20984739010591,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.906823702049089,1.62065732026684,0,0,0,2.19284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71995018166751,3.23522940041993,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr15:81187409..81187422,+ | |short_description=p@chr15:81187409..81187422,+ | ||
}} | }} |
Latest revision as of 04:49, 25 July 2015
Short description: | p@chr15:81187409..81187422, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81187409..81187422, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 9.18e-19 | 3 |
fibroblast | 1.60e-18 | 76 |
fibrocyte | 2.50e-18 | 3 |
tendon cell | 2.50e-18 | 3 |
adipocyte of omentum tissue | 3.77e-18 | 3 |
preadipocyte | 1.45e-17 | 12 |
fat cell | 1.06e-09 | 15 |
preadipocyte of the breast | 6.66e-09 | 3 |
synovial cell | 9.45e-09 | 3 |
mesenchymal cell | 5.65e-08 | 354 |
connective tissue cell | 1.05e-07 | 361 |
perirenal preadipocyte | 1.75e-07 | 1 |
perirenal adipocyte cell | 1.98e-07 | 1 |
androgen binding protein secreting cell | 3.01e-07 | 1 |
seminiferous tubule epithelial cell | 3.01e-07 | 1 |
Sertoli cell | 3.01e-07 | 1 |
multi fate stem cell | 5.32e-07 | 427 |
somatic stem cell | 8.09e-07 | 433 |
motile cell | 9.13e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.10e-35 | 6 |
peritoneum | 4.10e-35 | 6 |
abdominal cavity | 4.10e-35 | 6 |
visceral peritoneum | 4.10e-35 | 6 |
cavity lining | 2.53e-30 | 12 |
serous membrane | 2.53e-30 | 12 |
dense regular connective tissue | 2.50e-18 | 3 |
tendon | 2.50e-18 | 3 |
regular connective tissue | 2.50e-18 | 3 |
perirenal fat | 3.09e-13 | 2 |
stratified squamous epithelium | 9.45e-09 | 3 |
layer of synovial tissue | 9.45e-09 | 3 |
synovial joint | 9.45e-09 | 3 |
synovial membrane of synovial joint | 9.45e-09 | 3 |
organ component layer | 1.29e-08 | 66 |
body cavity or lining | 2.98e-08 | 49 |
connective tissue | 3.64e-08 | 371 |
mesothelium | 3.01e-07 | 1 |
seminiferous tubule of testis | 3.01e-07 | 1 |
epithelium of male gonad | 3.01e-07 | 1 |
epithelial cord | 3.01e-07 | 1 |
sex cord | 3.01e-07 | 1 |
seminiferous tubule epithelium | 3.01e-07 | 1 |
testis sex cord | 3.01e-07 | 1 |
genital ridge | 3.01e-07 | 1 |
primitive sex cord of indifferent gonad | 3.01e-07 | 1 |
coelomic epithelium | 3.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.40e-07 | 1 |