FFCP PHASE1:Hg19::chr15:48498480..48498500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6557 | |EntrezGene=6557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10910 | |HGNC=10910 | ||
|TSSclassifier=strong | |||
|UniProt=Q13621,E9PDW4,Q8IUN5,B4DPF4 | |UniProt=Q13621,E9PDW4,Q8IUN5,B4DPF4 | ||
|association_with_transcript=0bp_to_ENST00000380993,ENST00000396577,ENST00000559307,ENST00000560480,NM_000338,NM_001184832,uc001zwn.3,uc010bem.2_5end | |association_with_transcript=0bp_to_ENST00000380993,ENST00000396577,ENST00000559307,ENST00000560480,NM_000338,NM_001184832,uc001zwn.3,uc010bem.2_5end | ||
|cluster_id=chr15:48498480..48498500,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_1_at_SLC12A1_5end | |description=CAGE_peak_1_at_SLC12A1_5end | ||
|id=chr15:48498480..48498500,+ | |id=chr15:48498480..48498500,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.90e-17;10!UBERON:0007687;5.90e-17;10 | |||
|ontology_enrichment_disease=DOID:3493!8.60e-08!2 | |ontology_enrichment_disease=DOID:3493!8.60e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!9.36e-15!1;UBERON:0005418!1.41e-14!1;UBERON:0001389!1.41e-14!1;UBERON:0000026!1.41e-14!1;UBERON:0008784!1.41e-14!1;UBERON:0006058!1.41e-14!1;UBERON:0003663!1.41e-14!1;UBERON:0001383!1.41e-14!1;UBERON:0004256!1.41e-14!1;UBERON:0002529!1.41e-14!1;UBERON:0004708!1.41e-14!1;UBERON:0002101!1.41e-14!1;UBERON:0004709!1.41e-14!1;UBERON:0003661!1.41e-14!1;UBERON:0002471!1.41e-14!1;UBERON:0004357!1.41e-14!1;UBERON:0009872!1.41e-14!1;UBERON:0004347!1.41e-14!1;UBERON:0005420!1.41e-14!1;UBERON:0005732!1.41e-14!1;UBERON:0006057!1.41e-14!1;UBERON:0000978!1.41e-14!1;UBERON:0002103!1.41e-14!1;UBERON:0001665!1.41e-14!1;UBERON:0003823!1.41e-14!1;UBERON:0000154!1.41e-14!1;UBERON:0005733!1.41e-14!1;UBERON:0005730!1.41e-14!1;UBERON:0002113!3.13e-08!27;UBERON:0003918!3.13e-08!27;UBERON:0005095!3.13e-08!27;UBERON:0007687!3.13e-08!27;UBERON:0001630!6.15e-08!2;UBERON:0005090!6.15e-08!2;UBERON:0000489!5.67e-07!32 | |ontology_enrichment_uberon=UBERON:0007029!9.36e-15!1;UBERON:0005418!1.41e-14!1;UBERON:0001389!1.41e-14!1;UBERON:0000026!1.41e-14!1;UBERON:0008784!1.41e-14!1;UBERON:0006058!1.41e-14!1;UBERON:0003663!1.41e-14!1;UBERON:0001383!1.41e-14!1;UBERON:0004256!1.41e-14!1;UBERON:0002529!1.41e-14!1;UBERON:0004708!1.41e-14!1;UBERON:0002101!1.41e-14!1;UBERON:0004709!1.41e-14!1;UBERON:0003661!1.41e-14!1;UBERON:0002471!1.41e-14!1;UBERON:0004357!1.41e-14!1;UBERON:0009872!1.41e-14!1;UBERON:0004347!1.41e-14!1;UBERON:0005420!1.41e-14!1;UBERON:0005732!1.41e-14!1;UBERON:0006057!1.41e-14!1;UBERON:0000978!1.41e-14!1;UBERON:0002103!1.41e-14!1;UBERON:0001665!1.41e-14!1;UBERON:0003823!1.41e-14!1;UBERON:0000154!1.41e-14!1;UBERON:0005733!1.41e-14!1;UBERON:0005730!1.41e-14!1;UBERON:0002113!3.13e-08!27;UBERON:0003918!3.13e-08!27;UBERON:0005095!3.13e-08!27;UBERON:0007687!3.13e-08!27;UBERON:0001630!6.15e-08!2;UBERON:0005090!6.15e-08!2;UBERON:0000489!5.67e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.15e-07;24!UBERON:0011143;1.15e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.78e-07,26;UBERON:0003918,3.78e-07,26;UBERON:0011143,3.78e-07,26;UBERON:0005095,3.78e-07,26;UBERON:0007687,3.78e-07,26 | |||
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|short_description=p1@SLC12A1 | |short_description=p1@SLC12A1 | ||
}} | }} |
Latest revision as of 21:44, 17 September 2015
Short description: | p1@SLC12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC12A1_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000380993, ENST00000396577, ENST00000559307, ENST00000560480, NM_000338, NM_001184832, uc001zwn.3, uc010bem.2_5end |
EntrezGene: | SLC12A1 |
HGNC: | 10910 |
UniProt: | Q13621E9PDW4Q8IUN5B4DPF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.78e-07 | 26 |
kidney mesenchyme | 3.78e-07 | 26 |
upper urinary tract | 3.78e-07 | 26 |
kidney rudiment | 3.78e-07 | 26 |
kidney field | 3.78e-07 | 26 |