FFCP PHASE1:Hg19::chr15:39889243..39889260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39889243..39889260,+ | |||
|coexpression_cluster_id=C453 | |coexpression_cluster_id=C453 | ||
|description=CAGE_peak_at_chr15:39889243..39889260,+ | |description=CAGE_peak_at_chr15:39889243..39889260,+ | ||
|id=chr15:39889243..39889260,+ | |id=chr15:39889243..39889260,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.88e-15!24;CL:0000115!5.58e-12!35;CL:0000071!9.92e-12!18;CL:0002546!9.92e-12!18;CL:0002078!7.91e-10!44;CL:0000222!3.55e-08!119;CL:1000413!7.47e-07!9 | |ontology_enrichment_celltype=CL:0002139!6.88e-15!24;CL:0000115!5.58e-12!35;CL:0000071!9.92e-12!18;CL:0002546!9.92e-12!18;CL:0002078!7.91e-10!44;CL:0000222!3.55e-08!119;CL:1000413!7.47e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.73e-20;24!CL:0000071;9.06e-16;18!CL:0000115;1.31e-13;36!CL:0002078;6.31e-09;45!CL:1000413;2.48e-08;9!CL:0002544;2.89e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.15e-20,24;CL:0000115,3.48e-16,36;CL:0000071,5.91e-16,18;CL:0002546,5.91e-16,18;CL:0002078,6.04e-13,45;CL:1000413,1.88e-08,9;CL:0000213,1.25e-07,58;CL:0000215,1.25e-07,58;CL:0002544,2.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.06e-16;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.09e-18!69;UBERON:0001981!1.46e-16!60;UBERON:0007500!1.46e-16!60;UBERON:0004537!1.46e-16!60;UBERON:0006965!1.46e-16!60;UBERON:0002049!3.02e-15!79;UBERON:0007798!3.02e-15!79;UBERON:0004872!9.26e-15!84;UBERON:0001986!9.92e-12!18;UBERON:0004638!9.92e-12!18;UBERON:0004852!9.92e-12!18;UBERON:0003914!1.94e-11!118;UBERON:0001637!9.34e-11!42;UBERON:0003509!9.34e-11!42;UBERON:0004572!9.34e-11!42;UBERON:0001009!6.88e-10!113;UBERON:0000487!7.96e-10!22;UBERON:0004535!1.19e-09!110;UBERON:0000490!4.17e-09!138;UBERON:0006914!2.18e-08!25;UBERON:0000480!3.35e-08!626;UBERON:0000467!4.45e-08!625;UBERON:0000468!4.85e-08!659;UBERON:0004573!8.59e-08!33;UBERON:0004571!8.59e-08!33;UBERON:0000947!2.42e-07!21;UBERON:0010191!2.42e-07!21;UBERON:0003915!7.47e-07!9;UBERON:0004700!7.47e-07!9;UBERON:0001917!7.47e-07!9 | |ontology_enrichment_uberon=UBERON:0000055!2.09e-18!69;UBERON:0001981!1.46e-16!60;UBERON:0007500!1.46e-16!60;UBERON:0004537!1.46e-16!60;UBERON:0006965!1.46e-16!60;UBERON:0002049!3.02e-15!79;UBERON:0007798!3.02e-15!79;UBERON:0004872!9.26e-15!84;UBERON:0001986!9.92e-12!18;UBERON:0004638!9.92e-12!18;UBERON:0004852!9.92e-12!18;UBERON:0003914!1.94e-11!118;UBERON:0001637!9.34e-11!42;UBERON:0003509!9.34e-11!42;UBERON:0004572!9.34e-11!42;UBERON:0001009!6.88e-10!113;UBERON:0000487!7.96e-10!22;UBERON:0004535!1.19e-09!110;UBERON:0000490!4.17e-09!138;UBERON:0006914!2.18e-08!25;UBERON:0000480!3.35e-08!626;UBERON:0000467!4.45e-08!625;UBERON:0000468!4.85e-08!659;UBERON:0004573!8.59e-08!33;UBERON:0004571!8.59e-08!33;UBERON:0000947!2.42e-07!21;UBERON:0010191!2.42e-07!21;UBERON:0003915!7.47e-07!9;UBERON:0004700!7.47e-07!9;UBERON:0001917!7.47e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.06e-16;18!UBERON:0001986;9.06e-16;18!UBERON:0004852;9.06e-16;18!UBERON:0000487;3.98e-12;22!UBERON:0006914;3.52e-10;25!UBERON:0000055;1.06e-08;65!UBERON:0003915;2.48e-08;9!UBERON:0004700;2.48e-08;9!UBERON:0001917;2.48e-08;9!UBERON:0000490;4.17e-07;33!UBERON:0007500;6.18e-07;56!UBERON:0001981;6.18e-07;56!UBERON:0004537;6.18e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.91e-16,18;UBERON:0001986,5.91e-16,18;UBERON:0004852,5.91e-16,18;UBERON:0000055,5.11e-14,68;UBERON:0000487,2.84e-12,22;UBERON:0007500,1.08e-11,59;UBERON:0001981,1.08e-11,59;UBERON:0004537,1.08e-11,59;UBERON:0006965,1.08e-11,59;UBERON:0002049,4.66e-11,78;UBERON:0007798,4.66e-11,78;UBERON:0006914,2.64e-10,25;UBERON:0004872,7.78e-10,83;UBERON:0003915,1.88e-08,9;UBERON:0004700,1.88e-08,9;UBERON:0001917,1.88e-08,9;UBERON:0003914,3.37e-08,117;UBERON:0004535,6.49e-08,109;UBERON:0003081,8.39e-08,203;UBERON:0001009,1.81e-07,112;UBERON:0001637,7.62e-07,42;UBERON:0003509,7.62e-07,42;UBERON:0004572,7.62e-07,42 | |||
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| ||
|short_description=p@chr15:39889243..39889260,+ | |short_description=p@chr15:39889243..39889260,+ | ||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p@chr15:39889243..39889260, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39889243..39889260, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.15e-20 | 24 |
endothelial cell | 3.48e-16 | 36 |
blood vessel endothelial cell | 5.91e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.91e-16 | 18 |
meso-epithelial cell | 6.04e-13 | 45 |
endothelial cell of artery | 1.88e-08 | 9 |
lining cell | 1.25e-07 | 58 |
barrier cell | 1.25e-07 | 58 |
aortic endothelial cell | 2.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.91e-16 | 18 |
endothelium | 5.91e-16 | 18 |
cardiovascular system endothelium | 5.91e-16 | 18 |
vessel | 5.11e-14 | 68 |
simple squamous epithelium | 2.84e-12 | 22 |
epithelial tube open at both ends | 1.08e-11 | 59 |
blood vessel | 1.08e-11 | 59 |
blood vasculature | 1.08e-11 | 59 |
vascular cord | 1.08e-11 | 59 |
vasculature | 4.66e-11 | 78 |
vascular system | 4.66e-11 | 78 |
squamous epithelium | 2.64e-10 | 25 |
splanchnic layer of lateral plate mesoderm | 7.78e-10 | 83 |
endothelial tube | 1.88e-08 | 9 |
arterial system endothelium | 1.88e-08 | 9 |
endothelium of artery | 1.88e-08 | 9 |
epithelial tube | 3.37e-08 | 117 |
cardiovascular system | 6.49e-08 | 109 |
lateral plate mesoderm | 8.39e-08 | 203 |
circulatory system | 1.81e-07 | 112 |
artery | 7.62e-07 | 42 |
arterial blood vessel | 7.62e-07 | 42 |
arterial system | 7.62e-07 | 42 |