FFCP PHASE1:Hg19::chr15:39889224..39889239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39889224..39889239,+ | |||
|coexpression_cluster_id=C453 | |coexpression_cluster_id=C453 | ||
|description=CAGE_peak_at_chr15:39889224..39889239,+ | |description=CAGE_peak_at_chr15:39889224..39889239,+ | ||
|id=chr15:39889224..39889239,+ | |id=chr15:39889224..39889239,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.88e-13!24;CL:0000055!1.49e-10!180;CL:0000071!3.06e-10!18;CL:0002546!3.06e-10!18;CL:0000115!4.14e-10!35;CL:0000222!1.84e-09!119;CL:0000057!6.13e-09!75;CL:0002371!7.46e-09!591;CL:0002078!9.30e-09!44;CL:1000413!2.68e-07!9;CL:0000220!8.94e-07!246 | |ontology_enrichment_celltype=CL:0002139!1.88e-13!24;CL:0000055!1.49e-10!180;CL:0000071!3.06e-10!18;CL:0002546!3.06e-10!18;CL:0000115!4.14e-10!35;CL:0000222!1.84e-09!119;CL:0000057!6.13e-09!75;CL:0002371!7.46e-09!591;CL:0002078!9.30e-09!44;CL:1000413!2.68e-07!9;CL:0000220!8.94e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.80e-18;24!CL:0000071;2.28e-15;18!CL:0000115;1.55e-13;36!CL:1000413;1.06e-12;9!CL:0002544;3.37e-09;6!CL:0002543;3.20e-08;6!CL:0002078;9.36e-08;45!CL:0002334;3.83e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.52e-18,24;CL:0000071,8.04e-16,18;CL:0002546,8.04e-16,18;CL:0000115,3.94e-15,36;CL:1000413,3.87e-13,9;CL:0002078,3.29e-12,45;CL:0002544,1.86e-09,6;CL:0002543,2.38e-08,6;CL:0000213,4.39e-08,58;CL:0000215,4.39e-08,58;CL:0000222,1.83e-07,121;CL:0002334,3.15e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.28e-15;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.03e-17!69;UBERON:0002049!6.64e-16!79;UBERON:0007798!6.64e-16!79;UBERON:0001981!1.07e-15!60;UBERON:0007500!1.07e-15!60;UBERON:0004537!1.07e-15!60;UBERON:0006965!1.07e-15!60;UBERON:0004872!5.28e-15!84;UBERON:0000487!8.92e-12!22;UBERON:0003914!1.73e-11!118;UBERON:0001637!1.38e-10!42;UBERON:0003509!1.38e-10!42;UBERON:0004572!1.38e-10!42;UBERON:0001986!3.06e-10!18;UBERON:0004638!3.06e-10!18;UBERON:0004852!3.06e-10!18;UBERON:0004535!3.81e-10!110;UBERON:0001009!6.29e-10!113;UBERON:0000490!8.25e-10!138;UBERON:0006914!2.69e-09!25;UBERON:0000468!2.79e-09!659;UBERON:0000467!4.22e-09!625;UBERON:0000480!5.73e-09!626;UBERON:0000926!4.22e-08!448;UBERON:0004120!4.22e-08!448;UBERON:0006603!4.22e-08!448;UBERON:0004573!1.37e-07!33;UBERON:0004571!1.37e-07!33;UBERON:0003915!2.68e-07!9;UBERON:0004700!2.68e-07!9;UBERON:0001917!2.68e-07!9;UBERON:0002100!3.85e-07!216 | |ontology_enrichment_uberon=UBERON:0000055!6.03e-17!69;UBERON:0002049!6.64e-16!79;UBERON:0007798!6.64e-16!79;UBERON:0001981!1.07e-15!60;UBERON:0007500!1.07e-15!60;UBERON:0004537!1.07e-15!60;UBERON:0006965!1.07e-15!60;UBERON:0004872!5.28e-15!84;UBERON:0000487!8.92e-12!22;UBERON:0003914!1.73e-11!118;UBERON:0001637!1.38e-10!42;UBERON:0003509!1.38e-10!42;UBERON:0004572!1.38e-10!42;UBERON:0001986!3.06e-10!18;UBERON:0004638!3.06e-10!18;UBERON:0004852!3.06e-10!18;UBERON:0004535!3.81e-10!110;UBERON:0001009!6.29e-10!113;UBERON:0000490!8.25e-10!138;UBERON:0006914!2.69e-09!25;UBERON:0000468!2.79e-09!659;UBERON:0000467!4.22e-09!625;UBERON:0000480!5.73e-09!626;UBERON:0000926!4.22e-08!448;UBERON:0004120!4.22e-08!448;UBERON:0006603!4.22e-08!448;UBERON:0004573!1.37e-07!33;UBERON:0004571!1.37e-07!33;UBERON:0003915!2.68e-07!9;UBERON:0004700!2.68e-07!9;UBERON:0001917!2.68e-07!9;UBERON:0002100!3.85e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.02e-15;22!UBERON:0004638;2.28e-15;18!UBERON:0001986;2.28e-15;18!UBERON:0004852;2.28e-15;18!UBERON:0006914;2.91e-13;25!UBERON:0003915;1.06e-12;9!UBERON:0004700;1.06e-12;9!UBERON:0001917;1.06e-12;9!UBERON:0003688;1.00e-09;6!UBERON:0002358;1.00e-09;6!UBERON:0003684;1.00e-09;6!UBERON:0001178;1.00e-09;6!UBERON:0001637;3.10e-09;42!UBERON:0003509;3.10e-09;42!UBERON:0004572;3.10e-09;42!UBERON:0000490;1.48e-08;33!UBERON:0000055;4.67e-08;65!UBERON:0007500;1.05e-07;56!UBERON:0001981;1.05e-07;56!UBERON:0004537;1.05e-07;56!UBERON:0004573;2.25e-07;33!UBERON:0004571;2.25e-07;33!UBERON:0000947;5.97e-07;21!UBERON:0010191;5.97e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.40e-17,68;UBERON:0000487,3.64e-16,22;UBERON:0004638,8.04e-16,18;UBERON:0001986,8.04e-16,18;UBERON:0004852,8.04e-16,18;UBERON:0007500,3.25e-15,59;UBERON:0001981,3.25e-15,59;UBERON:0004537,3.25e-15,59;UBERON:0006965,3.25e-15,59;UBERON:0006914,1.20e-13,25;UBERON:0002049,2.34e-13,78;UBERON:0007798,2.34e-13,78;UBERON:0003915,3.87e-13,9;UBERON:0004700,3.87e-13,9;UBERON:0001917,3.87e-13,9;UBERON:0004872,5.20e-12,83;UBERON:0001637,6.01e-11,42;UBERON:0003509,6.01e-11,42;UBERON:0004572,6.01e-11,42;UBERON:0003688,1.17e-09,6;UBERON:0002358,1.17e-09,6;UBERON:0003684,1.17e-09,6;UBERON:0001178,1.17e-09,6;UBERON:0003914,1.04e-08,117;UBERON:0001009,1.28e-08,112;UBERON:0004535,1.87e-08,109;UBERON:0003081,4.55e-08,203;UBERON:0004871,2.43e-07,8;UBERON:0004573,3.76e-07,33;UBERON:0004571,3.76e-07,33;UBERON:0000947,4.96e-07,21;UBERON:0010191,4.96e-07,21 | |||
|phase1_expression=2.90685406832891,2.14100523890983,2.25527046553554,4.00293193412522,2.23480547213644,0.872338524100369,2.53299878168311,0,0,1.47440361900905,0,0.873765488520689,2.11013582582763,0,0.662794751455832,3.36162573225888,1.20538905604795,3.65155045193687,5.36726078669558,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0.919421224478927,0.6024118375565,0,0,0,0,0,1.00272223735071,0,0,0,0,0.726991193897824,0,0,2.32429036905685,0,0,1.43846196161075,0.256160706529101,0,2.41321976515633,0.645484683583826,0,1.88242339542605,0.545812300115692,0,3.36692281607993,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0,3.48251086354301,2.26954089876456,0,2.00998932205395,0,0,1.81619850790011,1.10483290796269,0.316462387440884,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,1.98762407366705,2.58070378531837,5.9013885273291,2.82653970962005,3.35599548967925,1.37559020970034,1.8809546988313,0.775250277507987,0.71153252537342,1.67360306382335,0,0.760272105718513,0.732186172644509,1.10298924103761,2.43042584364528,1.16089646769304,1.34717623575702,1.80178368773316,1.53316637465883,3.79706263827252,1.28241220751285,0,0,0,22.3637378262893,0.506522046658319,1.32409180813219,0.286836620748814,0,0,5.33744978648525,1.97334038733728,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0.206651562351531,4.75201142912821,5.43987244412825,0,0,0,0,0.831192346452549,7.02364193409341,7.96868269077451,12.3195208303409,0.567160915800105,2.15267562826634,2.34913127700424,0.635795703478686,0.300091096084402,0.92747276314595,0.257640540045629,0.930584281657949,2.02531598689519,0.389748020644795,1.00973509697646,1.93304787148829,0.161646056818812,0.355009592516614,0.201504196455281,0.67824236924195,0.773043412653187,2.18196896472668,2.58124135850103,0,0,0,0.10366105501537,0,0.36497735907583,0,3.21620469096443,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0.330881918197182,0,0.237270619111097,0,0.392442930250692,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0.185176890317059,0,0,0,0,0.117408694235822,2.16549671641611,2.31492756288305,2.47330397904978,0,0,0,0,0,0,1.34385702559088,0.708875486211932,0.806026704325635,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.03417372606222,0,0,0.26593811658487,3.12022310734098,0,0,0,0,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,12.6862225533792,18.9134728124991,11.985383542579,13.3541213091693,3.31040709700491,0,1.03473071292505,0,0.553107505625109,0.347534457872331,0,0,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,1.73675465473144,7.98002261097925,2.24528075546459,1.28139149255701,2.55853624533352,5.14732547659544,1.48418066444991,0.154209693802656,1.24293207719189,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0.680374821106063,2.59099099322567,6.16909010761157,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,3.21367859688319,0,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0.330569830721956,1.15314040419064,2.4246415373971,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,1.29726953372744,0.858749320451947,0.744316738719335,0.632758849437452,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.808729926293264,3.17020642346017,2.10629228119491,0,0.243713489631284,0,0,0.565621727814851,0,0,1.32687795048244,0,0,0.655894752046633,1.62328301570163,2.16876448669825,0.281695602532241,0.717056761020258,0.589494246078727,2.85336841185,0,0,0,0,0.349934720244983,0.673554789078584,0,0,0,1.29151611801369,0,0,1.83778720165568,0,0,0,0,0,0,0,0,0,5.77487913158015,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,5.01363417949149,2.07875276582847,5.52889263778618,0.994147647766298,0,0,0,0,0.398495976502139,0.552567831062295,0,0.306806047506464,0,4.97663340258892,1.3480252672099,0,0,0.394573622547734,0,7.77958931012458,0,0.0927680981618513,0,0,0,1.44999915086959,0.1137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0.569710279235006,0,0,0,0.31900115973192,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,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| ||
|short_description=p@chr15:39889224..39889239,+ | |short_description=p@chr15:39889224..39889239,+ | ||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p@chr15:39889224..39889239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39889224..39889239, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.52e-18 | 24 |
blood vessel endothelial cell | 8.04e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.04e-16 | 18 |
endothelial cell | 3.94e-15 | 36 |
endothelial cell of artery | 3.87e-13 | 9 |
meso-epithelial cell | 3.29e-12 | 45 |
aortic endothelial cell | 1.86e-09 | 6 |
vein endothelial cell | 2.38e-08 | 6 |
lining cell | 4.39e-08 | 58 |
barrier cell | 4.39e-08 | 58 |
mesodermal cell | 1.83e-07 | 121 |
preadipocyte | 3.15e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
vessel | 9.40e-17 | 68 |
simple squamous epithelium | 3.64e-16 | 22 |
blood vessel endothelium | 8.04e-16 | 18 |
endothelium | 8.04e-16 | 18 |
cardiovascular system endothelium | 8.04e-16 | 18 |
epithelial tube open at both ends | 3.25e-15 | 59 |
blood vessel | 3.25e-15 | 59 |
blood vasculature | 3.25e-15 | 59 |
vascular cord | 3.25e-15 | 59 |
squamous epithelium | 1.20e-13 | 25 |
vasculature | 2.34e-13 | 78 |
vascular system | 2.34e-13 | 78 |
endothelial tube | 3.87e-13 | 9 |
arterial system endothelium | 3.87e-13 | 9 |
endothelium of artery | 3.87e-13 | 9 |
splanchnic layer of lateral plate mesoderm | 5.20e-12 | 83 |
artery | 6.01e-11 | 42 |
arterial blood vessel | 6.01e-11 | 42 |
arterial system | 6.01e-11 | 42 |
omentum | 1.17e-09 | 6 |
peritoneum | 1.17e-09 | 6 |
abdominal cavity | 1.17e-09 | 6 |
visceral peritoneum | 1.17e-09 | 6 |
epithelial tube | 1.04e-08 | 117 |
circulatory system | 1.28e-08 | 112 |
cardiovascular system | 1.87e-08 | 109 |
lateral plate mesoderm | 4.55e-08 | 203 |
somatic layer of lateral plate mesoderm | 2.43e-07 | 8 |
systemic artery | 3.76e-07 | 33 |
systemic arterial system | 3.76e-07 | 33 |
aorta | 4.96e-07 | 21 |
aortic system | 4.96e-07 | 21 |