FFCP PHASE1:Hg19::chr14:76278486..76278493,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:76278486..76278493,+ | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_at_chr14:76278486..76278493,+ | |description=CAGE_peak_at_chr14:76278486..76278493,+ | ||
|id=chr14:76278486..76278493,+ | |id=chr14:76278486..76278493,+ | ||
|ontology_enrichment_celltype=CL:0000167!5.42e-15!1;CL:0000164!5.42e-15!1;CL:0000502!5.42e-15!1;CL:0000172!5.42e-15!1;CL:0000173!5.42e-15!1;CL:0002351!5.42e-15!1;CL:0002563!1.85e-14!4;CL:0002253!4.69e-08!2 | |ontology_enrichment_celltype=CL:0000167!5.42e-15!1;CL:0000164!5.42e-15!1;CL:0000502!5.42e-15!1;CL:0000172!5.42e-15!1;CL:0000173!5.42e-15!1;CL:0002351!5.42e-15!1;CL:0002563!1.85e-14!4;CL:0002253!4.69e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.99e-30;1!CL:0000164;9.99e-30;1!CL:0000502;9.99e-30;1!CL:0000172;9.99e-30;1!CL:0000173;9.99e-30;1!CL:0002563;4.86e-29;4!CL:0002253;2.37e-15;2!CL:0002231;8.17e-11;3!CL:0002076;3.99e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.99e-30,1;CL:0000164,9.99e-30,1;CL:0000502,9.99e-30,1;CL:0000172,9.99e-30,1;CL:0000173,9.99e-30,1;CL:0002351,9.99e-30,1;CL:0002563,4.21e-29,4;CL:0002253,2.05e-15,2;CL:0002231,8.17e-11,3;CL:0002076,9.24e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002351;9.99e-30;1 | |||
|ontology_enrichment_disease=DOID:4430!5.42e-15!1;DOID:3111!2.11e-14!1;DOID:3603!2.11e-14!1;DOID:0050619!2.75e-14!1;DOID:1357!2.75e-14!1;DOID:3119!2.99e-09!14 | |ontology_enrichment_disease=DOID:4430!5.42e-15!1;DOID:3111!2.11e-14!1;DOID:3603!2.11e-14!1;DOID:0050619!2.75e-14!1;DOID:1357!2.75e-14!1;DOID:3119!2.99e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:4430;9.99e-30;1!DOID:3119;4.21e-09;14!DOID:5409;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.99e-30,1;DOID:3119,4.04e-09,14;DOID:5409,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.85e-14!4;UBERON:0001262!1.85e-14!4;UBERON:0004786!1.85e-14!4;UBERON:0004808!1.85e-14!4;UBERON:0001277!1.85e-14!4;UBERON:0001052!2.58e-14!4;UBERON:0001764!2.75e-14!1;UBERON:0001825!2.75e-14!1;UBERON:0003350!9.26e-12!5;UBERON:0004907!1.21e-11!5;UBERON:0000344!1.29e-10!12;UBERON:0001046!6.24e-07!19;UBERON:0000485!6.41e-07!9 | |ontology_enrichment_uberon=UBERON:0001242!1.85e-14!4;UBERON:0001262!1.85e-14!4;UBERON:0004786!1.85e-14!4;UBERON:0004808!1.85e-14!4;UBERON:0001277!1.85e-14!4;UBERON:0001052!2.58e-14!4;UBERON:0001764!2.75e-14!1;UBERON:0001825!2.75e-14!1;UBERON:0003350!9.26e-12!5;UBERON:0004907!1.21e-11!5;UBERON:0000344!1.29e-10!12;UBERON:0001046!6.24e-07!19;UBERON:0000485!6.41e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.86e-29;4!UBERON:0001262;4.86e-29;4!UBERON:0004786;4.86e-29;4!UBERON:0004808;4.86e-29;4!UBERON:0001277;4.86e-29;4!UBERON:0000485;4.36e-17;7!UBERON:0003929;4.36e-17;7!UBERON:0003350;4.37e-15;8!UBERON:0001052;2.43e-08;4!UBERON:0005911;2.89e-08;36!UBERON:0000160;3.04e-07;17!UBERON:0004907;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.21e-29,4;UBERON:0001262,4.21e-29,4;UBERON:0004786,4.21e-29,4;UBERON:0004808,4.21e-29,4;UBERON:0001277,4.21e-29,4;UBERON:0003350,4.07e-15,8;UBERON:0000485,1.49e-13,9;UBERON:0001052,2.26e-08,4;UBERON:0000160,2.95e-07,17;UBERON:0004907,6.04e-07,5;UBERON:0001046,6.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95523743325651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,1.20770274853339,0,0,18.3423745580994,0,5.89191367754065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95523743325651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,1.20770274853339,0,0,18.3423745580994,0,5.89191367754065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:76278486..76278493,+ | |short_description=p@chr14:76278486..76278493,+ | ||
}} | }} |
Latest revision as of 22:56, 24 July 2015
Short description: | p@chr14:76278486..76278493, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:76278486..76278493, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.99e-30 | 1 |
enteroendocrine cell | 9.99e-30 | 1 |
type D enteroendocrine cell | 9.99e-30 | 1 |
somatostatin secreting cell | 9.99e-30 | 1 |
pancreatic D cell | 9.99e-30 | 1 |
progenitor cell of endocrine pancreas | 9.99e-30 | 1 |
intestinal epithelial cell | 4.21e-29 | 4 |
epithelial cell of large intestine | 2.05e-15 | 2 |
epithelial cell of prostate | 8.17e-11 | 3 |
endo-epithelial cell | 9.24e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.21e-29 | 4 |
wall of intestine | 4.21e-29 | 4 |
gastrointestinal system mucosa | 4.21e-29 | 4 |
gastrointestinal system epithelium | 4.21e-29 | 4 |
intestinal epithelium | 4.21e-29 | 4 |
epithelium of mucosa | 4.07e-15 | 8 |
simple columnar epithelium | 1.49e-13 | 9 |
rectum | 2.26e-08 | 4 |
intestine | 2.95e-07 | 17 |
lower digestive tract | 6.04e-07 | 5 |
hindgut | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.99e-30 | 1 |
gastrointestinal system cancer | 4.04e-09 | 14 |
lung small cell carcinoma | 2.61e-08 | 4 |