FFCP PHASE1:Hg19::chr14:73702509..73702520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:73702509..73702520,+ | |||
|coexpression_cluster_id=C253 | |coexpression_cluster_id=C253 | ||
|description=CAGE_peak_at_chr14:73702509..73702520,+ | |description=CAGE_peak_at_chr14:73702509..73702520,+ | ||
|id=chr14:73702509..73702520,+ | |id=chr14:73702509..73702520,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.45e-14!5;CL:0002575!1.10e-10!2 | |ontology_enrichment_celltype=CL:0002322!3.45e-14!5;CL:0002575!1.10e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002262;9.86e-18;2!CL:1000398;9.86e-18;2!CL:0002575;9.86e-18;2!CL:0000632;2.74e-12;3!CL:0000669;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,7.67e-18,2;CL:0002262,1.07e-17,2;CL:1000398,1.07e-17,2;CL:0000632,2.59e-12,3;CL:0000669,1.32e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.85e-10!11;UBERON:0004907!3.31e-09!5;UBERON:0005409!6.41e-09!35;UBERON:0001155!2.19e-08!9;UBERON:0002106!1.82e-07!3;UBERON:0004854!1.82e-07!3;UBERON:0009034!1.82e-07!3;UBERON:0002095!1.82e-07!3;UBERON:0004782!1.82e-07!3;UBERON:0003281!1.82e-07!3;UBERON:0009664!1.82e-07!3;UBERON:0002296!1.82e-07!3;UBERON:0005602!1.82e-07!3;UBERON:0001179!1.82e-07!3;UBERON:0006293!1.82e-07!3;UBERON:0007023!2.23e-07!115;UBERON:0000160!3.69e-07!27 | |ontology_enrichment_uberon=UBERON:0000059!1.85e-10!11;UBERON:0004907!3.31e-09!5;UBERON:0005409!6.41e-09!35;UBERON:0001155!2.19e-08!9;UBERON:0002106!1.82e-07!3;UBERON:0004854!1.82e-07!3;UBERON:0009034!1.82e-07!3;UBERON:0002095!1.82e-07!3;UBERON:0004782!1.82e-07!3;UBERON:0003281!1.82e-07!3;UBERON:0009664!1.82e-07!3;UBERON:0002296!1.82e-07!3;UBERON:0005602!1.82e-07!3;UBERON:0001179!1.82e-07!3;UBERON:0006293!1.82e-07!3;UBERON:0007023!2.23e-07!115;UBERON:0000160!3.69e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;9.86e-18;2!UBERON:0003497;9.86e-18;2!UBERON:0003909;9.86e-18;2!UBERON:0003835;9.86e-18;2!UBERON:0002106;1.85e-12;3!UBERON:0001280;2.74e-12;3!UBERON:0004647;2.74e-12;3!UBERON:0001052;1.22e-09;4!UBERON:0004177;5.35e-08;5!UBERON:0005057;5.35e-08;5!UBERON:0004907;5.73e-08;5!UBERON:0002107;6.36e-08;19!UBERON:0006925;6.36e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.07e-17,2;UBERON:0003497,1.07e-17,2;UBERON:0003909,1.07e-17,2;UBERON:0003835,1.07e-17,2;UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3;UBERON:0001280,2.89e-12,3;UBERON:0004647,2.89e-12,3;UBERON:0005171,2.89e-12,3;UBERON:0001052,1.22e-09,4;UBERON:0004907,5.73e-08,5;UBERON:0002107,6.36e-08,19;UBERON:0006925,6.36e-08,19;UBERON:0008836,6.36e-08,19;UBERON:0008835,5.74e-07,22;UBERON:0003894,5.74e-07,22;UBERON:0002394,8.97e-07,6;UBERON:0003928,8.97e-07,6 | |||
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| ||
|short_description=p@chr14:73702509..73702520,+ | |short_description=p@chr14:73702509..73702520,+ | ||
}} | }} |
Latest revision as of 22:33, 24 July 2015
Short description: | p@chr14:73702509..73702520, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:73702509..73702520, + |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 7.67e-18 | 2 |
endothelial cell of sinusoid | 1.07e-17 | 2 |
endothelial cell of hepatic sinusoid | 1.07e-17 | 2 |
hepatic stellate cell | 2.59e-12 | 3 |
pericyte cell | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.07e-17 | 2 |
abdomen blood vessel | 1.07e-17 | 2 |
sinusoid | 1.07e-17 | 2 |
abdominal segment blood vessel | 1.07e-17 | 2 |
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |
liver parenchyma | 2.89e-12 | 3 |
liver lobule | 2.89e-12 | 3 |
hepatic duct | 2.89e-12 | 3 |
rectum | 1.22e-09 | 4 |
lower digestive tract | 5.73e-08 | 5 |
liver | 6.36e-08 | 19 |
digestive gland | 6.36e-08 | 19 |
liver bud | 6.36e-08 | 19 |
hepatic diverticulum | 5.74e-07 | 22 |
liver primordium | 5.74e-07 | 22 |
bile duct | 8.97e-07 | 6 |
digestive system duct | 8.97e-07 | 6 |