FFCP PHASE1:Hg19::chr14:62037209..62037228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400221 | |EntrezGene=400221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V2X1 | |UniProt=G3V2X1 | ||
|association_with_transcript=-29bp_to_ENST00000229465,NR_039985,uc001xfp.2_5end | |association_with_transcript=-29bp_to_ENST00000229465,NR_039985,uc001xfp.2_5end | ||
|cluster_id=chr14:62037209..62037228,+ | |||
|coexpression_cluster_id=C1728 | |coexpression_cluster_id=C1728 | ||
|description=CAGE_peak_4_at_FLJ22447_5end | |description=CAGE_peak_4_at_FLJ22447_5end | ||
|id=chr14:62037209..62037228,+ | |id=chr14:62037209..62037228,+ | ||
|ontology_enrichment_celltype=CL:0000680!1.75e-09!57;CL:0000056!1.75e-09!57;CL:0000355!1.75e-09!57;CL:0000075!3.28e-09!27;CL:0000055!7.97e-09!180;CL:0000548!3.09e-08!679;CL:0000004!3.09e-08!679;CL:0000255!3.09e-08!679;CL:0000012!4.70e-08!682;CL:0000306!8.27e-08!4;CL:0002222!8.27e-08!4;CL:0002224!8.27e-08!4;CL:0000187!3.13e-07!54;CL:0000188!5.35e-07!9 | |ontology_enrichment_celltype=CL:0000680!1.75e-09!57;CL:0000056!1.75e-09!57;CL:0000355!1.75e-09!57;CL:0000075!3.28e-09!27;CL:0000055!7.97e-09!180;CL:0000548!3.09e-08!679;CL:0000004!3.09e-08!679;CL:0000255!3.09e-08!679;CL:0000012!4.70e-08!682;CL:0000306!8.27e-08!4;CL:0002222!8.27e-08!4;CL:0002224!8.27e-08!4;CL:0000187!3.13e-07!54;CL:0000188!5.35e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000306;4.73e-24;4!CL:0002222;4.73e-24;4!CL:0002224;4.73e-24;4!CL:0000075;1.68e-20;27!CL:0000064;1.76e-19;3!CL:0000067;1.76e-19;3!CL:0005012;1.76e-19;3!CL:0002304;1.76e-19;3!CL:0000710;2.01e-10;20!CL:0000515;7.86e-09;3!CL:0000342;1.20e-07;1!CL:0002565;1.20e-07;1!CL:0002379;1.58e-07;1!CL:1001319;4.33e-07;1!CL:1000600;4.33e-07;1!CL:0000056;7.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.39e-24,4;CL:0002222,6.39e-24,4;CL:0002224,6.39e-24,4;CL:0000075,2.35e-20,27;CL:0000064,1.76e-19,3;CL:0000067,1.76e-19,3;CL:0005012,1.76e-19,3;CL:0002304,1.76e-19,3;CL:0000710,2.40e-10,20;CL:0000342,1.20e-07,1;CL:0002565,1.20e-07,1;CL:0002379,1.54e-07,1;CL:1001319,5.84e-07,1;CL:1000600,5.84e-07,1;CL:0000066,9.12e-07,253;CL:0000515,9.94e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;7.98e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.58e-07;1!DOID:3565;1.58e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.54e-07,1;DOID:3565,1.54e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.24e-10!11;UBERON:0000490!2.33e-09!138;UBERON:0001134!3.22e-09!61;UBERON:0002036!3.22e-09!61;UBERON:0003082!3.22e-09!61;UBERON:0002385!1.04e-08!63;UBERON:0001015!1.04e-08!63;UBERON:0000383!1.04e-08!63;UBERON:0000488!3.22e-08!4;UBERON:0010077!8.27e-08!4;UBERON:0005389!8.27e-08!4;UBERON:0000484!8.27e-08!4;UBERON:0002546!8.27e-08!4;UBERON:0000965!8.27e-08!4;UBERON:0001803!8.27e-08!4;UBERON:0003073!8.27e-08!4;UBERON:0005426!8.27e-08!4;UBERON:0001801!2.54e-07!14;UBERON:0004290!3.44e-07!70;UBERON:0005256!5.45e-07!143;UBERON:0000914!5.57e-07!83;UBERON:0002329!5.57e-07!83;UBERON:0003077!5.57e-07!83;UBERON:0003059!5.57e-07!83;UBERON:0007282!5.57e-07!83;UBERON:0009618!5.57e-07!83;UBERON:0007285!5.57e-07!83 | |ontology_enrichment_uberon=UBERON:0007625!7.24e-10!11;UBERON:0000490!2.33e-09!138;UBERON:0001134!3.22e-09!61;UBERON:0002036!3.22e-09!61;UBERON:0003082!3.22e-09!61;UBERON:0002385!1.04e-08!63;UBERON:0001015!1.04e-08!63;UBERON:0000383!1.04e-08!63;UBERON:0000488!3.22e-08!4;UBERON:0010077!8.27e-08!4;UBERON:0005389!8.27e-08!4;UBERON:0000484!8.27e-08!4;UBERON:0002546!8.27e-08!4;UBERON:0000965!8.27e-08!4;UBERON:0001803!8.27e-08!4;UBERON:0003073!8.27e-08!4;UBERON:0005426!8.27e-08!4;UBERON:0001801!2.54e-07!14;UBERON:0004290!3.44e-07!70;UBERON:0005256!5.45e-07!143;UBERON:0000914!5.57e-07!83;UBERON:0002329!5.57e-07!83;UBERON:0003077!5.57e-07!83;UBERON:0003059!5.57e-07!83;UBERON:0007282!5.57e-07!83;UBERON:0009618!5.57e-07!83;UBERON:0007285!5.57e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.32e-34;11!UBERON:0001801;9.43e-27;14!UBERON:0000488;2.16e-25;4!UBERON:0010077;4.73e-24;4!UBERON:0005389;4.73e-24;4!UBERON:0000484;4.73e-24;4!UBERON:0000965;4.73e-24;4!UBERON:0001803;4.73e-24;4!UBERON:0001778;1.76e-19;3!UBERON:0001775;1.76e-19;3!UBERON:0000019;2.12e-19;19!UBERON:0000047;2.12e-19;19!UBERON:0004088;2.12e-19;19!UBERON:0010230;2.12e-19;19!UBERON:0000970;2.27e-18;20!UBERON:0002104;1.94e-17;21!UBERON:0001456;1.94e-17;21!UBERON:0002203;5.46e-17;6!UBERON:0001768;5.46e-17;6!UBERON:0002200;5.46e-17;6!UBERON:0000020;8.10e-16;23!UBERON:0001032;4.15e-15;24!UBERON:0004456;4.15e-15;24!UBERON:0000058;9.15e-15;10!UBERON:0002394;2.37e-14;4!UBERON:0003928;2.37e-14;4!UBERON:0002294;3.81e-14;7!UBERON:0001173;3.81e-14;7!UBERON:0010371;2.71e-11;31!UBERON:0006876;2.59e-09;11!UBERON:0001280;7.86e-09;3!UBERON:0004647;7.86e-09;3!UBERON:0002506;1.20e-07;1!UBERON:0001769;1.20e-07;1!UBERON:0004913;1.44e-07;1!UBERON:0003703;1.44e-07;1!UBERON:0001174;1.44e-07;1!UBERON:0004914;1.44e-07;1!UBERON:0001282;2.16e-07;1!UBERON:0009842;2.16e-07;1!UBERON:0003704;2.16e-07;1!UBERON:0001171;2.16e-07;1!UBERON:0001172;2.16e-07;1!UBERON:0001301;4.33e-07;1!UBERON:0004645;4.33e-07;1!UBERON:0001256;4.33e-07;1!UBERON:0001259;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.90e-34,11;UBERON:0001801,1.12e-26,14;UBERON:0000488,2.17e-25,4;UBERON:0010077,6.39e-24,4;UBERON:0005389,6.39e-24,4;UBERON:0000484,6.39e-24,4;UBERON:0002546,6.39e-24,4;UBERON:0000965,6.39e-24,4;UBERON:0001803,6.39e-24,4;UBERON:0003073,6.39e-24,4;UBERON:0005426,6.39e-24,4;UBERON:0001778,1.76e-19,3;UBERON:0001775,1.76e-19,3;UBERON:0000019,2.55e-18,20;UBERON:0000047,2.55e-18,20;UBERON:0010312,2.55e-18,20;UBERON:0004088,2.55e-18,20;UBERON:0010230,2.55e-18,20;UBERON:0003072,2.55e-18,20;UBERON:0004128,2.55e-18,20;UBERON:0003071,2.55e-18,20;UBERON:0000970,2.17e-17,21;UBERON:0002104,2.17e-17,21;UBERON:0002203,5.47e-17,6;UBERON:0001768,5.47e-17,6;UBERON:0002200,5.47e-17,6;UBERON:0002294,1.15e-16,9;UBERON:0001173,1.15e-16,9;UBERON:0004912,1.15e-16,9;UBERON:0001456,1.52e-16,22;UBERON:0002394,2.13e-16,6;UBERON:0003928,2.13e-16,6;UBERON:0000020,4.58e-15,24;UBERON:0001032,4.58e-15,24;UBERON:0004456,4.58e-15,24;UBERON:0000076,4.67e-12,8;UBERON:0005085,2.17e-11,31;UBERON:0000058,8.50e-11,19;UBERON:0006876,2.60e-09,11;UBERON:0001280,5.85e-09,3;UBERON:0004647,5.85e-09,3;UBERON:0005171,5.85e-09,3;UBERON:0002506,1.20e-07,1;UBERON:0001769,1.20e-07,1;UBERON:0004913,1.44e-07,1;UBERON:0003703,1.44e-07,1;UBERON:0001174,1.44e-07,1;UBERON:0004914,1.44e-07,1;UBERON:0001282,1.97e-07,1;UBERON:0009842,1.97e-07,1;UBERON:0003704,1.97e-07,1;UBERON:0001171,1.97e-07,1;UBERON:0001172,1.97e-07,1;UBERON:0001048,3.07e-07,160;UBERON:0001301,3.21e-07,1;UBERON:0004645,5.84e-07,1;UBERON:0001256,5.84e-07,1;UBERON:0001259,5.84e-07,1;UBERON:0001444,9.11e-07,49 | |||
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|short_description=p4@FLJ22447 | |short_description=p4@FLJ22447 | ||
}} | }} |
Latest revision as of 23:09, 24 September 2015
Short description: | p4@FLJ22447 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FLJ22447_5end |
Coexpression cluster: | C1728_mesenchymal_pagetoid_Ciliary_Iris_papillotubular_meningioma_Myoblast |
Association with transcript: | -29bp_to_ENST00000229465, NR_039985, uc001xfp.2_5end |
EntrezGene: | FLJ22447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.39e-24 | 4 |
vertebrate lens cell | 6.39e-24 | 4 |
lens epithelial cell | 6.39e-24 | 4 |
columnar/cuboidal epithelial cell | 2.35e-20 | 27 |
ciliated cell | 1.76e-19 | 3 |
ciliated epithelial cell | 1.76e-19 | 3 |
multi-ciliated epithelial cell | 1.76e-19 | 3 |
non-pigmented ciliary epithelial cell | 1.76e-19 | 3 |
neurecto-epithelial cell | 2.40e-10 | 20 |
pigment cell (sensu Vertebrata) | 1.20e-07 | 1 |
iris pigment epithelial cell | 1.20e-07 | 1 |
meningothelial cell | 1.54e-07 | 1 |
bladder cell | 5.84e-07 | 1 |
lower urinary tract cell | 5.84e-07 | 1 |
epithelial cell | 9.12e-07 | 253 |
skeletal muscle myoblast | 9.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.54e-07 | 1 |
meningioma | 1.54e-07 | 1 |