FFCP PHASE1:Hg19::chr13:36788718..36788729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100526761,54937 | |EntrezGene=100526761,54937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26026,38866 | |HGNC=26026,38866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000317764_5end | |association_with_transcript=0bp_to_ENST00000317764_5end | ||
|cluster_id=chr13:36788718..36788729,- | |||
|coexpression_cluster_id=C169 | |coexpression_cluster_id=C169 | ||
|description=CAGE_peak_3_at_CCDC169-SOHLH2_5end,CAGE_peak_3_at_SOHLH2_5end | |description=CAGE_peak_3_at_CCDC169-SOHLH2_5end,CAGE_peak_3_at_SOHLH2_5end | ||
|id=chr13:36788718..36788729,- | |id=chr13:36788718..36788729,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.35e-11;2!CL:0002178;7.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.47e-11,2;CL:0002178,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.49e-15!8;DOID:2531!8.31e-11!51;DOID:0060083!8.31e-11!51;DOID:2355!1.60e-09!1;DOID:0050619!1.89e-09!1;DOID:1357!1.89e-09!1;DOID:4960!6.72e-09!1;DOID:0070004!6.72e-09!1;DOID:0060058!1.47e-07!10;DOID:162!2.47e-07!235;DOID:14566!4.11e-07!239 | |ontology_enrichment_disease=DOID:1036!1.49e-15!8;DOID:2531!8.31e-11!51;DOID:0060083!8.31e-11!51;DOID:2355!1.60e-09!1;DOID:0050619!1.89e-09!1;DOID:1357!1.89e-09!1;DOID:4960!6.72e-09!1;DOID:0070004!6.72e-09!1;DOID:0060058!1.47e-07!10;DOID:162!2.47e-07!235;DOID:14566!4.11e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.53e-21;1!DOID:0050619;2.54e-21;1!DOID:1357;2.54e-21;1!DOID:74;1.82e-11;2!DOID:0060058;6.04e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.53e-21,1;DOID:0050619,2.30e-21,1;DOID:1357,2.30e-21,1;DOID:74,1.82e-11,2;DOID:0060058,6.28e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.74e-09!1;UBERON:0009842!1.74e-09!1;UBERON:0003704!1.74e-09!1;UBERON:0001171!1.74e-09!1;UBERON:0001172!1.74e-09!1;UBERON:0001764!1.89e-09!1;UBERON:0001825!1.89e-09!1;UBERON:0002146!9.17e-09!1;UBERON:0005623!9.17e-09!1 | |ontology_enrichment_uberon=UBERON:0001282!1.74e-09!1;UBERON:0009842!1.74e-09!1;UBERON:0003704!1.74e-09!1;UBERON:0001171!1.74e-09!1;UBERON:0001172!1.74e-09!1;UBERON:0001764!1.89e-09!1;UBERON:0001825!1.89e-09!1;UBERON:0002146!9.17e-09!1;UBERON:0005623!9.17e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.54e-21;1!UBERON:0001764;2.54e-21;1!UBERON:0009842;2.54e-21;1!UBERON:0003704;2.54e-21;1!UBERON:0001825;2.54e-21;1!UBERON:0001171;2.54e-21;1!UBERON:0001172;2.54e-21;1!UBERON:0002294;2.00e-12;7!UBERON:0001173;2.00e-12;7!UBERON:0002110;5.36e-08;3!UBERON:0001280;5.36e-08;3!UBERON:0004647;5.36e-08;3!UBERON:0002369;7.25e-08;3!UBERON:0001235;7.25e-08;3!UBERON:0006858;7.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.88e-21,1;UBERON:0009842,1.88e-21,1;UBERON:0003704,1.88e-21,1;UBERON:0001171,1.88e-21,1;UBERON:0001172,1.88e-21,1;UBERON:0001764,2.30e-21,1;UBERON:0001825,2.30e-21,1;UBERON:0002294,6.78e-10,9;UBERON:0001173,6.78e-10,9;UBERON:0004912,6.78e-10,9;UBERON:0001280,4.84e-08,3;UBERON:0004647,4.84e-08,3;UBERON:0005171,4.84e-08,3;UBERON:0002110,5.54e-08,3;UBERON:0006242,5.54e-08,3;UBERON:0002369,6.78e-08,3;UBERON:0001235,6.78e-08,3;UBERON:0006858,6.78e-08,3 | |||
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|short_description=p3@CCDC169-SOHLH2,p3@SOHLH2 | |short_description=p3@CCDC169-SOHLH2,p3@SOHLH2 | ||
}} | }} |
Latest revision as of 05:42, 17 September 2015
Short description: | p3@CCDC169-SOHLH2, p3@SOHLH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC169-SOHLH2_5end, CAGE_peak_3_at_SOHLH2_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000317764_5end |
EntrezGene: | 100526761,54937 |
HGNC: | 38866&submit=Submit 26026, 38866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.47e-11 | 2 |
epithelial cell of stomach | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.88e-21 | 1 |
acinus | 1.88e-21 | 1 |
intrahepatic bile duct | 1.88e-21 | 1 |
portal lobule | 1.88e-21 | 1 |
hepatic acinus | 1.88e-21 | 1 |
maxillary sinus | 2.30e-21 | 1 |
paranasal sinus | 2.30e-21 | 1 |
biliary system | 6.78e-10 | 9 |
biliary tree | 6.78e-10 | 9 |
biliary bud | 6.78e-10 | 9 |
liver parenchyma | 4.84e-08 | 3 |
liver lobule | 4.84e-08 | 3 |
hepatic duct | 4.84e-08 | 3 |
gallbladder | 5.54e-08 | 3 |
gall bladder primordium | 5.54e-08 | 3 |
adrenal gland | 6.78e-08 | 3 |
adrenal cortex | 6.78e-08 | 3 |
adrenal/interrenal gland | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.53e-21 | 1 |
paranasal sinus cancer | 2.30e-21 | 1 |
maxillary sinus cancer | 2.30e-21 | 1 |
hematopoietic system disease | 1.82e-11 | 2 |
lymphoma | 6.28e-09 | 10 |