FFCP PHASE1:Hg19::chr12:9822334..9822351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29121 | |EntrezGene=29121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14351 | |HGNC=14351 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466035_5end | |association_with_transcript=0bp_to_ENST00000466035_5end | ||
|cluster_id=chr12:9822334..9822351,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_CLEC2D_5end | |description=CAGE_peak_2_at_CLEC2D_5end | ||
|id=chr12:9822334..9822351,+ | |id=chr12:9822334..9822351,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.76e-54!140;CL:0002087!1.23e-51!119;CL:0000542!1.19e-49!53;CL:0000051!1.19e-49!53;CL:0000838!1.22e-48!52;CL:0000037!4.37e-44!172;CL:0000566!4.37e-44!172;CL:0002031!1.42e-43!124;CL:0000988!1.99e-43!182;CL:0002032!2.51e-41!165;CL:0000837!2.51e-41!165;CL:0000945!4.78e-24!24;CL:0000826!4.78e-24!24;CL:0000084!2.38e-22!25;CL:0000827!2.38e-22!25;CL:0000791!3.85e-21!18;CL:0000789!3.85e-21!18;CL:0002420!3.85e-21!18;CL:0002419!3.85e-21!18;CL:0000790!3.85e-21!18;CL:0000236!1.41e-15!14;CL:0000625!9.25e-14!11;CL:0002057!6.96e-13!42;CL:0000860!1.95e-11!45;CL:0000766!6.54e-10!76;CL:0002009!6.14e-09!65;CL:0002194!9.11e-09!63;CL:0000576!9.11e-09!63;CL:0000040!9.11e-09!63;CL:0000559!9.11e-09!63;CL:0000624!4.23e-08!6;CL:0000763!1.02e-07!112;CL:0000049!1.02e-07!112;CL:0000557!1.96e-07!71;CL:0000839!4.88e-07!70;CL:0000080!5.48e-07!6 | |ontology_enrichment_celltype=CL:0000738!4.76e-54!140;CL:0002087!1.23e-51!119;CL:0000542!1.19e-49!53;CL:0000051!1.19e-49!53;CL:0000838!1.22e-48!52;CL:0000037!4.37e-44!172;CL:0000566!4.37e-44!172;CL:0002031!1.42e-43!124;CL:0000988!1.99e-43!182;CL:0002032!2.51e-41!165;CL:0000837!2.51e-41!165;CL:0000945!4.78e-24!24;CL:0000826!4.78e-24!24;CL:0000084!2.38e-22!25;CL:0000827!2.38e-22!25;CL:0000791!3.85e-21!18;CL:0000789!3.85e-21!18;CL:0002420!3.85e-21!18;CL:0002419!3.85e-21!18;CL:0000790!3.85e-21!18;CL:0000236!1.41e-15!14;CL:0000625!9.25e-14!11;CL:0002057!6.96e-13!42;CL:0000860!1.95e-11!45;CL:0000766!6.54e-10!76;CL:0002009!6.14e-09!65;CL:0002194!9.11e-09!63;CL:0000576!9.11e-09!63;CL:0000040!9.11e-09!63;CL:0000559!9.11e-09!63;CL:0000624!4.23e-08!6;CL:0000763!1.02e-07!112;CL:0000049!1.02e-07!112;CL:0000557!1.96e-07!71;CL:0000839!4.88e-07!70;CL:0000080!5.48e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;8.57e-38;53!CL:0000945;1.32e-31;24!CL:0000791;6.53e-30;18!CL:0000789;6.53e-30;18!CL:0002419;6.53e-30;18!CL:0000084;5.11e-28;25!CL:0000236;1.32e-20;13!CL:0000625;3.31e-19;11!CL:0002087;9.62e-19;104!CL:0000738;2.37e-11;136!CL:0000624;5.14e-11;6!CL:0000988;3.33e-08;177!CL:0000860;1.26e-07;33!CL:0002057;1.26e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.91e-65,53;CL:0000051,6.91e-65,53;CL:0000838,1.99e-63,52;CL:0000738,6.72e-56,136;CL:0002087,3.04e-53,115;CL:0002031,9.99e-45,120;CL:0000988,2.29e-44,177;CL:0000037,1.38e-43,168;CL:0002032,4.45e-42,161;CL:0000837,4.45e-42,161;CL:0000945,1.42e-31,24;CL:0000826,1.42e-31,24;CL:0000791,6.49e-30,18;CL:0000789,6.49e-30,18;CL:0002420,6.49e-30,18;CL:0002419,6.49e-30,18;CL:0000790,6.49e-30,18;CL:0000084,5.09e-28,25;CL:0000827,5.09e-28,25;CL:0000236,7.70e-22,14;CL:0000625,3.29e-19,11;CL:0000624,5.05e-11,6;CL:0000134,2.80e-09,354;CL:0002320,9.90e-09,361;CL:0000860,3.14e-08,42;CL:0002057,3.14e-08,42;CL:0000219,7.50e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;8.57e-38;53!CL:0000790;6.53e-30;18!CL:0002057;9.61e-07;42 | |||
|ontology_enrichment_disease=DOID:0060058!1.02e-08!10 | |ontology_enrichment_disease=DOID:0060058!1.02e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.08e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.08e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.16e-19!102;UBERON:0003061!3.16e-19!102;UBERON:0002193!1.22e-17!112;UBERON:0000178!8.39e-15!15;UBERON:0000179!8.39e-15!15;UBERON:0000463!8.39e-15!15;UBERON:0004177!2.94e-08!7;UBERON:0007023!7.26e-08!115;UBERON:0002371!8.63e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!3.16e-19!102;UBERON:0003061!3.16e-19!102;UBERON:0002193!1.22e-17!112;UBERON:0000178!8.39e-15!15;UBERON:0000179!8.39e-15!15;UBERON:0000463!8.39e-15!15;UBERON:0004177!2.94e-08!7;UBERON:0007023!7.26e-08!115;UBERON:0002371!8.63e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-20;15!UBERON:0000179;1.03e-20;15!UBERON:0000463;1.03e-20;15!UBERON:0002390;2.21e-15;32!UBERON:0002193;3.87e-09;42!UBERON:0004177;3.04e-08;5!UBERON:0005057;3.04e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.02e-20,15;UBERON:0000179,1.02e-20,15;UBERON:0000463,1.02e-20,15;UBERON:0002390,4.28e-17,98;UBERON:0003061,4.28e-17,98;UBERON:0002193,2.75e-16,108;UBERON:0004177,2.99e-11,7;UBERON:0005057,2.99e-11,7;UBERON:0002384,5.41e-08,371;UBERON:0002370,3.16e-07,4;UBERON:0005058,3.16e-07,4;UBERON:0009113,3.16e-07,4;UBERON:0003295,3.16e-07,4;UBERON:0005562,3.16e-07,4;UBERON:0002405,9.66e-07,93 | |||
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| ||
|short_description=p2@CLEC2D | |short_description=p2@CLEC2D | ||
}} | }} |
Latest revision as of 05:35, 16 September 2015
Short description: | p2@CLEC2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLEC2D_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000466035_5end |
EntrezGene: | CLEC2D |
HGNC: | 14351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.91e-65 | 53 |
common lymphoid progenitor | 6.91e-65 | 53 |
lymphoid lineage restricted progenitor cell | 1.99e-63 | 52 |
leukocyte | 6.72e-56 | 136 |
nongranular leukocyte | 3.04e-53 | 115 |
hematopoietic lineage restricted progenitor cell | 9.99e-45 | 120 |
hematopoietic cell | 2.29e-44 | 177 |
hematopoietic stem cell | 1.38e-43 | 168 |
hematopoietic oligopotent progenitor cell | 4.45e-42 | 161 |
hematopoietic multipotent progenitor cell | 4.45e-42 | 161 |
lymphocyte of B lineage | 1.42e-31 | 24 |
pro-B cell | 1.42e-31 | 24 |
mature alpha-beta T cell | 6.49e-30 | 18 |
alpha-beta T cell | 6.49e-30 | 18 |
immature T cell | 6.49e-30 | 18 |
mature T cell | 6.49e-30 | 18 |
immature alpha-beta T cell | 6.49e-30 | 18 |
T cell | 5.09e-28 | 25 |
pro-T cell | 5.09e-28 | 25 |
B cell | 7.70e-22 | 14 |
CD8-positive, alpha-beta T cell | 3.29e-19 | 11 |
CD4-positive, alpha-beta T cell | 5.05e-11 | 6 |
mesenchymal cell | 2.80e-09 | 354 |
connective tissue cell | 9.90e-09 | 361 |
classical monocyte | 3.14e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-08 | 42 |
motile cell | 7.50e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
blood | 1.02e-20 | 15 |
haemolymphatic fluid | 1.02e-20 | 15 |
organism substance | 1.02e-20 | 15 |
hematopoietic system | 4.28e-17 | 98 |
blood island | 4.28e-17 | 98 |
hemolymphoid system | 2.75e-16 | 108 |
hemopoietic organ | 2.99e-11 | 7 |
immune organ | 2.99e-11 | 7 |
connective tissue | 5.41e-08 | 371 |
thymus | 3.16e-07 | 4 |
hemolymphoid system gland | 3.16e-07 | 4 |
thymic region | 3.16e-07 | 4 |
pharyngeal gland | 3.16e-07 | 4 |
thymus primordium | 3.16e-07 | 4 |
immune system | 9.66e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.08e-10 | 10 |