FFCP PHASE1:Hg19::chr12:76228543..76228556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76228543..76228556,- | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr12:76228543..76228556,- | |description=CAGE_peak_at_chr12:76228543..76228556,- | ||
|id=chr12:76228543..76228556,- | |id=chr12:76228543..76228556,- | ||
|ontology_enrichment_celltype=CL:0000148!1.50e-08!10;CL:0000541!1.50e-08!10 | |ontology_enrichment_celltype=CL:0000148!1.50e-08!10;CL:0000541!1.50e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.10e-30;3!CL:0002149;9.04e-16;6!CL:0002255;9.04e-16;6!CL:0000148;8.45e-10;10!CL:0000239;1.35e-08;3!CL:1000615;1.35e-08;3!CL:0002306;1.35e-08;3!CL:0000075;5.57e-08;27!CL:0000147;2.95e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.67e-30,3;CL:0002149,8.39e-16,6;CL:0002255,8.39e-16,6;CL:0000148,8.09e-10,10;CL:0000541,8.09e-10,10;CL:0000239,1.30e-08,3;CL:1000615,1.30e-08,3;CL:0002306,1.30e-08,3;CL:0000075,5.37e-08,27;CL:0000147,2.85e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.40e-10;10 | |||
|ontology_enrichment_disease=DOID:0060072!1.80e-08!4 | |ontology_enrichment_disease=DOID:0060072!1.80e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:3001;9.04e-16;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,8.39e-16,6 | |||
|ontology_enrichment_uberon=UBERON:0001828!9.40e-07!8 | |ontology_enrichment_uberon=UBERON:0001828!9.40e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.35e-08;3!UBERON:0007685;1.35e-08;3!UBERON:0004134;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.30e-08,3;UBERON:0007685,1.30e-08,3;UBERON:0004134,1.30e-08,3 | |||
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| ||
|short_description=p@chr12:76228543..76228556,- | |short_description=p@chr12:76228543..76228556,- | ||
}} | }} |
Latest revision as of 12:25, 24 July 2015
Short description: | p@chr12:76228543..76228556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76228543..76228556, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.67e-30 | 3 |
epithelial cell of uterus | 8.39e-16 | 6 |
stromal cell of endometrium | 8.39e-16 | 6 |
melanocyte | 8.09e-10 | 10 |
melanoblast | 8.09e-10 | 10 |
brush border epithelial cell | 1.30e-08 | 3 |
kidney cortex tubule cell | 1.30e-08 | 3 |
epithelial cell of proximal tubule | 1.30e-08 | 3 |
columnar/cuboidal epithelial cell | 5.37e-08 | 27 |
pigment cell | 2.85e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.30e-08 | 3 |
region of nephron tubule | 1.30e-08 | 3 |
proximal tubule | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 8.39e-16 | 6 |